RNA–Protein interactions for RNA: ENST00000557820.5

PKNOX1-207, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 4

Gene PKNOX1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-207ENST00000557820 TXNDC2Q86VQ3 553 aa9.52□□□□□ -0.89
PKNOX1-207ENST00000557820 MED14O60244 1454 aa9.52□□□□□ -0.89
PKNOX1-207ENST00000557820 TMEM131LA2VDJ0 1609 aa9.51□□□□□ -0.89
PKNOX1-207ENST00000557820 SPHKAPQ2M3C7 1700 aa9.51□□□□□ -0.89
PKNOX1-207ENST00000557820 CLTCL1P53675 1640 aa9.5□□□□□ -0.89
PKNOX1-207ENST00000557820 FBXO41Q8TF61 875 aa9.5□□□□□ -0.89
PKNOX1-207ENST00000557820 RIMS2Q9UQ26 1411 aa9.49□□□□□ -0.89
PKNOX1-207ENST00000557820 SLC26A8Q96RN1 970 aa9.49□□□□□ -0.89
PKNOX1-207ENST00000557820 SLC4A1APQ9BWU0 796 aaKnown RBP9.49□□□□□ -0.89
PKNOX1-207ENST00000557820 SLC52A1Q9NWF4 448 aa9.49□□□□□ -0.89
PKNOX1-207ENST00000557820 STRCP1A6NGW2 1772 aa9.49□□□□□ -0.89
PKNOX1-207ENST00000557820 ZFYVE9O95405 1425 aa9.48□□□□□ -0.89
PKNOX1-207ENST00000557820 TRPM2O94759 1503 aa9.48□□□□□ -0.89
PKNOX1-207ENST00000557820 EID1Q9Y6B2 187 aa9.48□□□□□ -0.89
PKNOX1-207ENST00000557820 KDM5AP29375 1690 aaKnown RBP9.48□□□□□ -0.89
PKNOX1-207ENST00000557820 RAB3GAP2Q9H2M9 1393 aa9.48□□□□□ -0.89
PKNOX1-207ENST00000557820 SETD5Q9C0A6 1442 aa9.48□□□□□ -0.89
PKNOX1-207ENST00000557820 PPP1R15AO75807 674 aaPredicted RBP9.47□□□□□ -0.89
PKNOX1-207ENST00000557820 BCANQ96GW7 911 aa9.47□□□□□ -0.89
PKNOX1-207ENST00000557820 RBM33Q96EV2 1170 aaKnown RBP9.46□□□□□ -0.9
PKNOX1-207ENST00000557820 ZNF326Q5BKZ1 582 aaKnown RBP9.45□□□□□ -0.9
PKNOX1-207ENST00000557820 MPHOSPH9Q99550 1183 aa9.45□□□□□ -0.9
PKNOX1-207ENST00000557820 PLEKHG1Q9ULL1 1385 aa9.44□□□□□ -0.9
PKNOX1-207ENST00000557820 CPS1P31327 1500 aa9.44□□□□□ -0.9
PKNOX1-207ENST00000557820 LRRC7Q96NW7 1537 aa9.44□□□□□ -0.9
PKNOX1-207ENST00000557820 ADAMTS13Q76LX8 1427 aa9.43□□□□□ -0.9
PKNOX1-207ENST00000557820 UBAP1LF5GYI3 381 aa9.43□□□□□ -0.9
PKNOX1-207ENST00000557820 CACNB1Q02641 598 aaPredicted RBP9.43□□□□□ -0.9
PKNOX1-207ENST00000557820 NEXMIFQ5QGS0 1516 aa9.42□□□□□ -0.9
PKNOX1-207ENST00000557820 ALKQ9UM73 1620 aa9.42□□□□□ -0.9
PKNOX1-207ENST00000557820 IQSEC2Q5JU85 1478 aa9.41□□□□□ -0.9
PKNOX1-207ENST00000557820 PIP4K2BP78356 416 aa9.41□□□□□ -0.9
PKNOX1-207ENST00000557820 NCBP3Q53F19 620 aaKnown RBP9.41□□□□□ -0.9
PKNOX1-207ENST00000557820 RNF39Q9H2S5 420 aa9.41□□□□□ -0.9
PKNOX1-207ENST00000557820 NRXN3Q9Y4C0 1643 aa9.41□□□□□ -0.9
PKNOX1-207ENST00000557820 NWD1Q149M9 1564 aa9.4□□□□□ -0.9
PKNOX1-207ENST00000557820 KIF1BO60333 1816 aa9.4□□□□□ -0.91
PKNOX1-207ENST00000557820 CCDC144AA2RUR9 1427 aa9.39□□□□□ -0.91
PKNOX1-207ENST00000557820 PTPRUQ92729 1446 aa9.39□□□□□ -0.91
PKNOX1-207ENST00000557820 TMEM94Q12767 1356 aa9.39□□□□□ -0.91
PKNOX1-207ENST00000557820 KCNA6P17658 529 aa9.39□□□□□ -0.91
PKNOX1-207ENST00000557820 RGL3Q3MIN7 710 aa9.39□□□□□ -0.91
PKNOX1-207ENST00000557820 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.39□□□□□ -0.91
PKNOX1-207ENST00000557820 XIRP1Q702N8 1843 aaKnown RBP9.39□□□□□ -0.91
PKNOX1-207ENST00000557820 METP08581 1390 aa9.37□□□□□ -0.91
PKNOX1-207ENST00000557820 SETBP1Q9Y6X0 1596 aa9.37□□□□□ -0.91
PKNOX1-207ENST00000557820 HDGFP51858 240 aaKnown RBP9.37□□□□□ -0.91
PKNOX1-207ENST00000557820 PROSER2Q86WR7 435 aaPredicted RBP9.37□□□□□ -0.91
PKNOX1-207ENST00000557820 SPATA31E1Q6ZUB1 1445 aa9.37□□□□□ -0.91
PKNOX1-207ENST00000557820 ADGRF5Q8IZF2 1346 aa9.36□□□□□ -0.91
PKNOX1-207ENST00000557820 NKTRP30414 1462 aaKnown RBP9.36□□□□□ -0.91
PKNOX1-207ENST00000557820 TBX22Q9Y458 520 aa9.36□□□□□ -0.91
PKNOX1-207ENST00000557820 PPLO60437 1756 aa9.36□□□□□ -0.91
PKNOX1-207ENST00000557820 DIP2AQ14689 1571 aa9.36□□□□□ -0.91
PKNOX1-207ENST00000557820 CHD2O14647 1828 aaKnown RBP9.35□□□□□ -0.91
PKNOX1-207ENST00000557820 HSPA1LP34931 641 aa9.34□□□□□ -0.91
PKNOX1-207ENST00000557820 AMOTL2Q9Y2J4 779 aa9.34□□□□□ -0.91
PKNOX1-207ENST00000557820 ANKRD30BQ9BXX2 1392 aa9.34□□□□□ -0.91
PKNOX1-207ENST00000557820 SETD1AO15047 1707 aaKnown RBP9.34□□□□□ -0.92
PKNOX1-207ENST00000557820 XRN1Q8IZH2 1706 aaKnown RBP9.34□□□□□ -0.92
PKNOX1-207ENST00000557820 TOM1O60784 492 aa9.33□□□□□ -0.92
PKNOX1-207ENST00000557820 NPM3O75607 178 aaKnown RBP9.33□□□□□ -0.92
PKNOX1-207ENST00000557820 C14orf37Q86TY3 774 aa9.33□□□□□ -0.92
PKNOX1-207ENST00000557820 IFT172Q9UG01 1749 aa9.33□□□□□ -0.92
PKNOX1-207ENST00000557820 ASXL1Q8IXJ9 1541 aa9.32□□□□□ -0.92
PKNOX1-207ENST00000557820 VGFO15240 615 aaPredicted RBP9.31□□□□□ -0.92
PKNOX1-207ENST00000557820 MSH6P52701 1360 aa9.31□□□□□ -0.92
PKNOX1-207ENST00000557820 PIK3R4Q99570 1358 aa9.31□□□□□ -0.92
PKNOX1-207ENST00000557820 RPGRIP1LQ68CZ1 1315 aa9.31□□□□□ -0.92
PKNOX1-207ENST00000557820 ROBO2Q9HCK4 1378 aa9.3□□□□□ -0.92
PKNOX1-207ENST00000557820 TMEM132EQ6IEE7 984 aa9.3□□□□□ -0.92
PKNOX1-207ENST00000557820 STK26Q9P289 416 aa9.3□□□□□ -0.92
PKNOX1-207ENST00000557820 PIK3C2GO75747 1445 aa9.3□□□□□ -0.92
PKNOX1-207ENST00000557820 KDM2AQ9Y2K7 1162 aa9.29□□□□□ -0.92
PKNOX1-207ENST00000557820 ROBO1Q9Y6N7 1651 aa9.29□□□□□ -0.92
PKNOX1-207ENST00000557820 NALCNQ8IZF0 1738 aa9.28□□□□□ -0.92
PKNOX1-207ENST00000557820 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.28□□□□□ -0.92
PKNOX1-207ENST00000557820 HRCP23327 699 aa9.28□□□□□ -0.92
PKNOX1-207ENST00000557820 MYOM2P54296 1465 aa9.28□□□□□ -0.92
PKNOX1-207ENST00000557820 DHX57Q6P158 1386 aaKnown RBP9.27□□□□□ -0.93
PKNOX1-207ENST00000557820 PLEKHH1Q9ULM0 1364 aa9.27□□□□□ -0.93
PKNOX1-207ENST00000557820 CFAP70Q5T0N1 1121 aa9.27□□□□□ -0.93
PKNOX1-207ENST00000557820 DCAF11Q8TEB1 546 aa9.27□□□□□ -0.93
PKNOX1-207ENST00000557820 ACIN1Q9UKV3 1341 aaKnown RBP9.27□□□□□ -0.93
PKNOX1-207ENST00000557820 NRXN1Q9ULB1 1477 aa9.27□□□□□ -0.93
PKNOX1-207ENST00000557820 PTCH1Q13635 1447 aa9.26□□□□□ -0.93
PKNOX1-207ENST00000557820 ADGRL3Q9HAR2 1447 aa9.26□□□□□ -0.93
PKNOX1-207ENST00000557820 TRIM26Q12899 539 aaPredicted RBP9.26□□□□□ -0.93
PKNOX1-207ENST00000557820 WAPLQ7Z5K2 1190 aa9.26□□□□□ -0.93
PKNOX1-207ENST00000557820 SIN3AQ96ST3 1273 aa9.26□□□□□ -0.93
PKNOX1-207ENST00000557820 SLAIN2Q9P270 581 aa9.25□□□□□ -0.93
PKNOX1-207ENST00000557820 LRPPRCP42704 1394 aaKnown RBP9.24□□□□□ -0.93
PKNOX1-207ENST00000557820 DISP3Q9P2K9 1392 aa9.24□□□□□ -0.93
PKNOX1-207ENST00000557820 MST1RQ04912 1400 aa9.24□□□□□ -0.93
PKNOX1-207ENST00000557820 FAM135BQ49AJ0 1406 aa9.24□□□□□ -0.93
PKNOX1-207ENST00000557820 YTHDC2Q9H6S0 1430 aaKnown RBP9.24□□□□□ -0.93
PKNOX1-207ENST00000557820 ATF3P18847 181 aa9.24□□□□□ -0.93
PKNOX1-207ENST00000557820 SAFB2Q14151 953 aaKnown RBP eCLIP9.24□□□□□ -0.93
PKNOX1-207ENST00000557820 DDX17Q92841 729 aaKnown RBP9.24□□□□□ -0.93
PKNOX1-207ENST00000557820 C19orf44Q9H6X5 657 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms