RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 MYO5BQ9ULV0 1848 aa32.86■■■□□ 2.85
CRNDE-203ENST00000557792 GCC2Q8IWJ2 1684 aa32.86■■■□□ 2.85
CRNDE-203ENST00000557792 NAIPQ13075 1403 aa32.85■■■□□ 2.85
CRNDE-203ENST00000557792 TMEM94Q12767 1356 aa32.84■■■□□ 2.85
CRNDE-203ENST00000557792 ZFYVE9O95405 1425 aa32.8■■■□□ 2.84
CRNDE-203ENST00000557792 PROSER2Q86WR7 435 aaPredicted RBP32.79■■■□□ 2.84
CRNDE-203ENST00000557792 BCANQ96GW7 911 aa32.79■■■□□ 2.84
CRNDE-203ENST00000557792 PHF23Q9BUL5 403 aaPredicted RBP32.79■■■□□ 2.84
CRNDE-203ENST00000557792 TMEM131LA2VDJ0 1609 aa32.79■■■□□ 2.84
CRNDE-203ENST00000557792 NWD1Q149M9 1564 aa32.79■■■□□ 2.84
CRNDE-203ENST00000557792 IQGAP3Q86VI3 1631 aa32.78■■■□□ 2.84
CRNDE-203ENST00000557792 E9PCH4 1651 aa32.77■■■□□ 2.84
CRNDE-203ENST00000557792 NKTRP30414 1462 aaKnown RBP32.76■■■□□ 2.84
CRNDE-203ENST00000557792 RBM33Q96EV2 1170 aaKnown RBP32.76■■■□□ 2.83
CRNDE-203ENST00000557792 FAM135BQ49AJ0 1406 aa32.76■■■□□ 2.83
CRNDE-203ENST00000557792 RIMS2Q9UQ26 1411 aa32.76■■■□□ 2.83
CRNDE-203ENST00000557792 HFM1A2PYH4 1435 aa32.75■■■□□ 2.83
CRNDE-203ENST00000557792 PLEKHG1Q9ULL1 1385 aa32.74■■■□□ 2.83
CRNDE-203ENST00000557792 PPP1R15AO75807 674 aaPredicted RBP32.71■■■□□ 2.83
CRNDE-203ENST00000557792 CHD2O14647 1828 aaKnown RBP32.7■■■□□ 2.83
CRNDE-203ENST00000557792 HDGFP51858 240 aaKnown RBP32.7■■■□□ 2.83
CRNDE-203ENST00000557792 CHGAP10645 457 aaKnown RBP32.68■■■□□ 2.82
CRNDE-203ENST00000557792 ROBO1Q9Y6N7 1651 aa32.68■■■□□ 2.82
CRNDE-203ENST00000557792 TRIM52Q96A61 297 aa32.67■■■□□ 2.82
CRNDE-203ENST00000557792 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.64■■■□□ 2.82
CRNDE-203ENST00000557792 MSH6P52701 1360 aa32.63■■■□□ 2.81
CRNDE-203ENST00000557792 TBX22Q9Y458 520 aa32.62■■■□□ 2.81
CRNDE-203ENST00000557792 NUTM2DQ5VT03 806 aaPredicted RBP32.6■■■□□ 2.81
CRNDE-203ENST00000557792 ADAMTS13Q76LX8 1427 aa32.58■■■□□ 2.81
CRNDE-203ENST00000557792 RGS17Q9UGC6 210 aaPredicted RBP32.56■■■□□ 2.8
CRNDE-203ENST00000557792 DIP2AQ14689 1571 aa32.55■■■□□ 2.8
CRNDE-203ENST00000557792 SLAIN2Q9P270 581 aa32.55■■■□□ 2.8
CRNDE-203ENST00000557792 SLC4A1APQ9BWU0 796 aaKnown RBP32.54■■■□□ 2.8
CRNDE-203ENST00000557792 NCOA3Q9Y6Q9 1424 aa32.51■■■□□ 2.79
CRNDE-203ENST00000557792 SPHKAPQ2M3C7 1700 aa32.5■■■□□ 2.79
CRNDE-203ENST00000557792 PHLPP1O60346 1717 aa32.49■■■□□ 2.79
CRNDE-203ENST00000557792 PIK3R4Q99570 1358 aa32.49■■■□□ 2.79
CRNDE-203ENST00000557792 TRPM2O94759 1503 aa32.46■■■□□ 2.79
CRNDE-203ENST00000557792 C14orf37Q86TY3 774 aa32.45■■■□□ 2.79
CRNDE-203ENST00000557792 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.43■■■□□ 2.78
CRNDE-203ENST00000557792 SETD5Q9C0A6 1442 aa32.43■■■□□ 2.78
CRNDE-203ENST00000557792 PTPRUQ92729 1446 aa32.42■■■□□ 2.78
CRNDE-203ENST00000557792 FOXD1Q16676 465 aa32.41■■■□□ 2.78
CRNDE-203ENST00000557792 MPHOSPH9Q99550 1183 aa32.4■■■□□ 2.78
CRNDE-203ENST00000557792 AMOTL2Q9Y2J4 779 aa32.4■■■□□ 2.78
CRNDE-203ENST00000557792 NRXN3Q9Y4C0 1643 aa32.4■■■□□ 2.78
CRNDE-203ENST00000557792 C19orf44Q9H6X5 657 aa32.39■■■□□ 2.78
CRNDE-203ENST00000557792 COL16A1Q07092 1604 aaPredicted RBP32.38■■■□□ 2.77
CRNDE-203ENST00000557792 JCADQ9P266 1359 aa32.38■■■□□ 2.77
CRNDE-203ENST00000557792 ZNF326Q5BKZ1 582 aaKnown RBP32.38■■■□□ 2.77
CRNDE-203ENST00000557792 SETBP1Q9Y6X0 1596 aa32.37■■■□□ 2.77
CRNDE-203ENST00000557792 CADPS2Q86UW7 1296 aa32.37■■■□□ 2.77
CRNDE-203ENST00000557792 ATF3P18847 181 aa32.36■■■□□ 2.77
CRNDE-203ENST00000557792 POTEAQ6S8J7 498 aa32.36■■■□□ 2.77
CRNDE-203ENST00000557792 CLTCL1P53675 1640 aa32.34■■■□□ 2.77
CRNDE-203ENST00000557792 XRN1Q8IZH2 1706 aaKnown RBP32.34■■■□□ 2.77
CRNDE-203ENST00000557792 ACIN1Q9UKV3 1341 aaKnown RBP32.33■■■□□ 2.77
CRNDE-203ENST00000557792 RAB3GAP2Q9H2M9 1393 aa32.31■■■□□ 2.76
CRNDE-203ENST00000557792 AHDC1Q5TGY3 1603 aaPredicted RBP32.29■■■□□ 2.76
CRNDE-203ENST00000557792 NEXMIFQ5QGS0 1516 aa32.28■■■□□ 2.76
CRNDE-203ENST00000557792 KIF1BO60333 1816 aa32.27■■■□□ 2.76
CRNDE-203ENST00000557792 METP08581 1390 aa32.27■■■□□ 2.76
CRNDE-203ENST00000557792 DCCP43146 1447 aa32.26■■■□□ 2.75
CRNDE-203ENST00000557792 BRINP3Q76B58 766 aa32.22■■■□□ 2.75
CRNDE-203ENST00000557792 SPATA31A6Q5VVP1 1343 aa32.22■■■□□ 2.75
CRNDE-203ENST00000557792 LRP6O75581 1613 aa32.22■■■□□ 2.75
CRNDE-203ENST00000557792 SHPRHQ149N8 1683 aa32.21■■■□□ 2.75
CRNDE-203ENST00000557792 RPGRIP1LQ68CZ1 1315 aa32.18■■■□□ 2.74
CRNDE-203ENST00000557792 CCDC144AA2RUR9 1427 aa32.17■■■□□ 2.74
CRNDE-203ENST00000557792 VGFO15240 615 aaPredicted RBP32.17■■■□□ 2.74
CRNDE-203ENST00000557792 HRCP23327 699 aa32.17■■■□□ 2.74
CRNDE-203ENST00000557792 MST1RQ04912 1400 aa32.17■■■□□ 2.74
CRNDE-203ENST00000557792 ASXL1Q8IXJ9 1541 aa32.16■■■□□ 2.74
CRNDE-203ENST00000557792 RGL3Q3MIN7 710 aa32.13■■■□□ 2.73
CRNDE-203ENST00000557792 MEX3CQ5U5Q3 659 aaKnown RBP32.13■■■□□ 2.73
CRNDE-203ENST00000557792 NALCNQ8IZF0 1738 aa32.13■■■□□ 2.73
CRNDE-203ENST00000557792 ADGRL3Q9HAR2 1447 aa32.13■■■□□ 2.73
CRNDE-203ENST00000557792 SETD1AO15047 1707 aaKnown RBP32.11■■■□□ 2.73
CRNDE-203ENST00000557792 NHSL1Q5SYE7 1610 aa32.11■■■□□ 2.73
CRNDE-203ENST00000557792 SPATA31E1Q6ZUB1 1445 aa32.08■■■□□ 2.73
CRNDE-203ENST00000557792 ZNF772Q68DY9 489 aaPredicted RBP32.04■■■□□ 2.72
CRNDE-203ENST00000557792 PPLO60437 1756 aa32.04■■■□□ 2.72
CRNDE-203ENST00000557792 PTCH1Q13635 1447 aa32.03■■■□□ 2.72
CRNDE-203ENST00000557792 NUTM2BA6NNL0 878 aaPredicted RBP32.03■■■□□ 2.72
CRNDE-203ENST00000557792 NUTM2EB1AL46 878 aaPredicted RBP32.03■■■□□ 2.72
CRNDE-203ENST00000557792 NUTM2AQ8IVF1 878 aaPredicted RBP32.03■■■□□ 2.72
CRNDE-203ENST00000557792 ADGRF5Q8IZF2 1346 aa32.01■■■□□ 2.72
CRNDE-203ENST00000557792 DDX17Q92841 729 aaKnown RBP32.01■■■□□ 2.71
CRNDE-203ENST00000557792 ROBO2Q9HCK4 1378 aa32.01■■■□□ 2.71
CRNDE-203ENST00000557792 ANKRD30BQ9BXX2 1392 aa31.99■■■□□ 2.71
CRNDE-203ENST00000557792 LRRC59Q96AG4 307 aaKnown RBP31.99■■■□□ 2.71
CRNDE-203ENST00000557792 C1orf167Q5SNV9 1468 aa31.97■■■□□ 2.71
CRNDE-203ENST00000557792 PRAG1Q86YV5 1406 aa31.97■■■□□ 2.71
CRNDE-203ENST00000557792 PNPLA6Q8IY17 1366 aa31.93■■■□□ 2.7
CRNDE-203ENST00000557792 LAMC1P11047 1609 aa31.91■■■□□ 2.7
CRNDE-203ENST00000557792 AFF2P51816 1311 aa31.9■■■□□ 2.7
CRNDE-203ENST00000557792 RXRBP28702 533 aa31.88■■■□□ 2.69
CRNDE-203ENST00000557792 ORAI2Q96SN7 254 aa31.88■■■□□ 2.69
CRNDE-203ENST00000557792 IFT172Q9UG01 1749 aa31.83■■■□□ 2.69
CRNDE-203ENST00000557792 SOS2Q07890 1332 aaPredicted RBP31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms