RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 STAC3Q96MF2 364 aa20.02■□□□□ 0.8
SHMT2-234ENST00000557703 LTKP29376 864 aa20.01■□□□□ 0.79
SHMT2-234ENST00000557703 NPHP4O75161 1426 aaPredicted RBP20.01■□□□□ 0.79
SHMT2-234ENST00000557703 RIMS2Q9UQ26 1411 aa20.01■□□□□ 0.79
SHMT2-234ENST00000557703 VGFO15240 615 aaPredicted RBP19.99■□□□□ 0.79
SHMT2-234ENST00000557703 ZNF326Q5BKZ1 582 aaKnown RBP19.99■□□□□ 0.79
SHMT2-234ENST00000557703 PCGF6Q9BYE7 350 aa19.99■□□□□ 0.79
SHMT2-234ENST00000557703 PPP1R15AO75807 674 aaPredicted RBP19.98■□□□□ 0.79
SHMT2-234ENST00000557703 PLEKHG1Q9ULL1 1385 aa19.97■□□□□ 0.79
SHMT2-234ENST00000557703 SPATA31E1Q6ZUB1 1445 aa19.97■□□□□ 0.79
SHMT2-234ENST00000557703 ILDR1Q86SU0 546 aaPredicted RBP19.96■□□□□ 0.79
SHMT2-234ENST00000557703 MYO5BQ9ULV0 1848 aa19.96■□□□□ 0.79
SHMT2-234ENST00000557703 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.78
SHMT2-234ENST00000557703 IQGAP1P46940 1657 aa19.94■□□□□ 0.78
SHMT2-234ENST00000557703 TBX22Q9Y458 520 aa19.92■□□□□ 0.78
SHMT2-234ENST00000557703 CLSPNQ9HAW4 1339 aa19.91■□□□□ 0.78
SHMT2-234ENST00000557703 NEXMIFQ5QGS0 1516 aa19.9■□□□□ 0.78
SHMT2-234ENST00000557703 PIK3R4Q99570 1358 aa19.89■□□□□ 0.77
SHMT2-234ENST00000557703 DIP2AQ14689 1571 aa19.88■□□□□ 0.77
SHMT2-234ENST00000557703 RGL3Q3MIN7 710 aa19.88■□□□□ 0.77
SHMT2-234ENST00000557703 BCANQ96GW7 911 aa19.88■□□□□ 0.77
SHMT2-234ENST00000557703 SETBP1Q9Y6X0 1596 aa19.86■□□□□ 0.77
SHMT2-234ENST00000557703 PPLO60437 1756 aa19.85■□□□□ 0.77
SHMT2-234ENST00000557703 CPS1P31327 1500 aa19.83■□□□□ 0.77
SHMT2-234ENST00000557703 KCNA6P17658 529 aa19.83■□□□□ 0.77
SHMT2-234ENST00000557703 MYOM2P54296 1465 aa19.83■□□□□ 0.76
SHMT2-234ENST00000557703 SLC26A8Q96RN1 970 aa19.82■□□□□ 0.76
SHMT2-234ENST00000557703 ADAMTS13Q76LX8 1427 aa19.82■□□□□ 0.76
SHMT2-234ENST00000557703 NUTM2DQ5VT03 806 aaPredicted RBP19.81■□□□□ 0.76
SHMT2-234ENST00000557703 IQSEC2Q5JU85 1478 aa19.8■□□□□ 0.76
SHMT2-234ENST00000557703 NRXN1Q9ULB1 1477 aa19.79■□□□□ 0.76
SHMT2-234ENST00000557703 IFT172Q9UG01 1749 aa19.79■□□□□ 0.76
SHMT2-234ENST00000557703 ZNF335Q9H4Z2 1342 aaPredicted RBP19.79■□□□□ 0.76
SHMT2-234ENST00000557703 LTBP4Q8N2S1 1624 aa19.79■□□□□ 0.76
SHMT2-234ENST00000557703 DCAF11Q8TEB1 546 aa19.78■□□□□ 0.76
SHMT2-234ENST00000557703 PIK3C2GO75747 1445 aa19.77■□□□□ 0.76
SHMT2-234ENST00000557703 TIMELESSQ9UNS1 1208 aa19.77■□□□□ 0.76
SHMT2-234ENST00000557703 ADGRF5Q8IZF2 1346 aa19.76■□□□□ 0.75
SHMT2-234ENST00000557703 CERKQ8TCT0 537 aa19.76■□□□□ 0.75
SHMT2-234ENST00000557703 NKTRP30414 1462 aaKnown RBP19.75■□□□□ 0.75
SHMT2-234ENST00000557703 C14orf93Q9H972 538 aaKnown RBP19.75■□□□□ 0.75
SHMT2-234ENST00000557703 NRXN3Q9Y4C0 1643 aa19.75■□□□□ 0.75
SHMT2-234ENST00000557703 NCOA3Q9Y6Q9 1424 aa19.75■□□□□ 0.75
SHMT2-234ENST00000557703 ALKQ9UM73 1620 aa19.73■□□□□ 0.75
SHMT2-234ENST00000557703 SIN3AQ96ST3 1273 aa19.73■□□□□ 0.75
SHMT2-234ENST00000557703 CHD2O14647 1828 aaKnown RBP19.73■□□□□ 0.75
SHMT2-234ENST00000557703 NWD1Q149M9 1564 aa19.73■□□□□ 0.75
SHMT2-234ENST00000557703 NEUROD1Q13562 356 aa19.72■□□□□ 0.75
SHMT2-234ENST00000557703 PRAG1Q86YV5 1406 aa19.72■□□□□ 0.75
SHMT2-234ENST00000557703 AMOTL2Q9Y2J4 779 aa19.71■□□□□ 0.75
SHMT2-234ENST00000557703 LAMC1P11047 1609 aa19.71■□□□□ 0.75
SHMT2-234ENST00000557703 L3MBTL2Q969R5 705 aa19.7■□□□□ 0.74
SHMT2-234ENST00000557703 KDM2AQ9Y2K7 1162 aa19.7■□□□□ 0.74
SHMT2-234ENST00000557703 METP08581 1390 aa19.7■□□□□ 0.74
SHMT2-234ENST00000557703 TONSLQ96HA7 1378 aa19.69■□□□□ 0.74
SHMT2-234ENST00000557703 PROSER2Q86WR7 435 aaPredicted RBP19.68■□□□□ 0.74
SHMT2-234ENST00000557703 SIRT1Q96EB6 747 aa19.68■□□□□ 0.74
SHMT2-234ENST00000557703 LRRC7Q96NW7 1537 aa19.67■□□□□ 0.74
SHMT2-234ENST00000557703 CCER1Q8TC90 406 aaPredicted RBP19.67■□□□□ 0.74
SHMT2-234ENST00000557703 ABCC11Q96J66 1382 aa19.67■□□□□ 0.74
SHMT2-234ENST00000557703 SETD1AO15047 1707 aaKnown RBP19.66■□□□□ 0.74
SHMT2-234ENST00000557703 LRPPRCP42704 1394 aaKnown RBP19.65■□□□□ 0.74
SHMT2-234ENST00000557703 PTCH1Q13635 1447 aa19.65■□□□□ 0.74
SHMT2-234ENST00000557703 STRCP1A6NGW2 1772 aa19.65■□□□□ 0.74
SHMT2-234ENST00000557703 CFAP70Q5T0N1 1121 aa19.64■□□□□ 0.73
SHMT2-234ENST00000557703 TECPR2O15040 1411 aa19.64■□□□□ 0.73
SHMT2-234ENST00000557703 PTPRUQ92729 1446 aa19.64■□□□□ 0.73
SHMT2-234ENST00000557703 XRN1Q8IZH2 1706 aaKnown RBP19.63■□□□□ 0.73
SHMT2-234ENST00000557703 KIAA1210Q9ULL0 1709 aa19.63■□□□□ 0.73
SHMT2-234ENST00000557703 TMEM94Q12767 1356 aa19.62■□□□□ 0.73
SHMT2-234ENST00000557703 TOM1O60784 492 aa19.62■□□□□ 0.73
SHMT2-234ENST00000557703 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
SHMT2-234ENST00000557703 FAM135BQ49AJ0 1406 aa19.6■□□□□ 0.73
SHMT2-234ENST00000557703 YTHDC2Q9H6S0 1430 aaKnown RBP19.6■□□□□ 0.73
SHMT2-234ENST00000557703 C19orf44Q9H6X5 657 aa19.6■□□□□ 0.73
SHMT2-234ENST00000557703 FBXO41Q8TF61 875 aa19.59■□□□□ 0.73
SHMT2-234ENST00000557703 MSH6P52701 1360 aa19.58■□□□□ 0.73
SHMT2-234ENST00000557703 DCCP43146 1447 aa19.58■□□□□ 0.72
SHMT2-234ENST00000557703 TMEM132EQ6IEE7 984 aa19.57■□□□□ 0.72
SHMT2-234ENST00000557703 ADGRB1O14514 1584 aa19.57■□□□□ 0.72
SHMT2-234ENST00000557703 DLC1Q96QB1 1528 aa19.56■□□□□ 0.72
SHMT2-234ENST00000557703 CADPS2Q86UW7 1296 aa19.56■□□□□ 0.72
SHMT2-234ENST00000557703 KNDC1Q76NI1 1749 aa19.56■□□□□ 0.72
SHMT2-234ENST00000557703 ASXL1Q8IXJ9 1541 aa19.55■□□□□ 0.72
SHMT2-234ENST00000557703 C14orf37Q86TY3 774 aa19.54■□□□□ 0.72
SHMT2-234ENST00000557703 ROBO2Q9HCK4 1378 aa19.54■□□□□ 0.72
SHMT2-234ENST00000557703 ADGRL3Q9HAR2 1447 aa19.52■□□□□ 0.72
SHMT2-234ENST00000557703 UBAP1LF5GYI3 381 aa19.52■□□□□ 0.72
SHMT2-234ENST00000557703 ATF3P18847 181 aa19.52■□□□□ 0.72
SHMT2-234ENST00000557703 STK26Q9P289 416 aa19.52■□□□□ 0.72
SHMT2-234ENST00000557703 XIRP1Q702N8 1843 aaKnown RBP19.52■□□□□ 0.72
SHMT2-234ENST00000557703 GPRASP1Q5JY77 1395 aa19.51■□□□□ 0.71
SHMT2-234ENST00000557703 ROCK2O75116 1388 aaKnown RBP19.49■□□□□ 0.71
SHMT2-234ENST00000557703 POGKQ9P215 609 aa19.49■□□□□ 0.71
SHMT2-234ENST00000557703 NBPF1Q3BBV0 1214 aa19.48■□□□□ 0.71
SHMT2-234ENST00000557703 TRAK1Q9UPV9 953 aa19.48■□□□□ 0.71
SHMT2-234ENST00000557703 TRPM1Q7Z4N2 1603 aa19.47■□□□□ 0.71
SHMT2-234ENST00000557703 SLC24A1O60721 1099 aa19.47■□□□□ 0.71
SHMT2-234ENST00000557703 NBPF8Q3BBV2 869 aa19.47■□□□□ 0.71
SHMT2-234ENST00000557703 SLAIN2Q9P270 581 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms