RNA–Protein interactions for RNA: ENST00000557648.1

MLH3-213, Transcript of mutL homolog 3, humanhuman

TSL 3

Gene MLH3, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3-213ENST00000557648 KIF1BO60333 1816 aa10.2□□□□□ -0.78
MLH3-213ENST00000557648 IDI1Q13907 227 aa10.2□□□□□ -0.78
MLH3-213ENST00000557648 NWD1Q149M9 1564 aa10.2□□□□□ -0.78
MLH3-213ENST00000557648 ANKLE2Q86XL3 938 aa10.2□□□□□ -0.78
MLH3-213ENST00000557648 THEMISQ8N1K5 641 aaPredicted RBP10.2□□□□□ -0.78
MLH3-213ENST00000557648 RRBP1Q9P2E9 1410 aaKnown RBP10.2□□□□□ -0.78
MLH3-213ENST00000557648 NRXN3Q9Y4C0 1643 aa10.2□□□□□ -0.78
MLH3-213ENST00000557648 NCBP3Q53F19 620 aaKnown RBP10.19□□□□□ -0.78
MLH3-213ENST00000557648 ROCK1Q13464 1354 aa10.18□□□□□ -0.78
MLH3-213ENST00000557648 TMEM2Q9UHN6 1383 aa10.18□□□□□ -0.78
MLH3-213ENST00000557648 UBAP1LF5GYI3 381 aa10.18□□□□□ -0.78
MLH3-213ENST00000557648 RPRD2Q5VT52 1461 aaKnown RBP10.17□□□□□ -0.78
MLH3-213ENST00000557648 ZFYVE9O95405 1425 aa10.17□□□□□ -0.78
MLH3-213ENST00000557648 SETD1AO15047 1707 aaKnown RBP10.16□□□□□ -0.78
MLH3-213ENST00000557648 TXNDC2Q86VQ3 553 aa10.16□□□□□ -0.78
MLH3-213ENST00000557648 NAIPQ13075 1403 aa10.16□□□□□ -0.78
MLH3-213ENST00000557648 ROBO1Q9Y6N7 1651 aa10.15□□□□□ -0.78
MLH3-213ENST00000557648 MED1Q15648 1581 aaPredicted RBP10.15□□□□□ -0.78
MLH3-213ENST00000557648 PIP4K2BP78356 416 aa10.15□□□□□ -0.78
MLH3-213ENST00000557648 NUTM2DQ5VT03 806 aaPredicted RBP10.15□□□□□ -0.78
MLH3-213ENST00000557648 ILDR2Q71H61 639 aa10.15□□□□□ -0.78
MLH3-213ENST00000557648 RBM33Q96EV2 1170 aaKnown RBP10.15□□□□□ -0.78
MLH3-213ENST00000557648 PPLO60437 1756 aa10.14□□□□□ -0.79
MLH3-213ENST00000557648 RIMS2Q9UQ26 1411 aa10.14□□□□□ -0.79
MLH3-213ENST00000557648 NUP155O75694 1391 aa10.14□□□□□ -0.79
MLH3-213ENST00000557648 NPM3O75607 178 aaKnown RBP10.13□□□□□ -0.79
MLH3-213ENST00000557648 HSPA1LP34931 641 aa10.13□□□□□ -0.79
MLH3-213ENST00000557648 SLC26A8Q96RN1 970 aa10.13□□□□□ -0.79
MLH3-213ENST00000557648 XRN1Q8IZH2 1706 aaKnown RBP10.13□□□□□ -0.79
MLH3-213ENST00000557648 IFT172Q9UG01 1749 aa10.13□□□□□ -0.79
MLH3-213ENST00000557648 DISP3Q9P2K9 1392 aa10.13□□□□□ -0.79
MLH3-213ENST00000557648 STAG3Q9UJ98 1225 aa10.12□□□□□ -0.79
MLH3-213ENST00000557648 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.12□□□□□ -0.79
MLH3-213ENST00000557648 TRPM2O94759 1503 aa10.12□□□□□ -0.79
MLH3-213ENST00000557648 NEXMIFQ5QGS0 1516 aa10.12□□□□□ -0.79
MLH3-213ENST00000557648 NALCNQ8IZF0 1738 aa10.11□□□□□ -0.79
MLH3-213ENST00000557648 ADAMTS13Q76LX8 1427 aa10.11□□□□□ -0.79
MLH3-213ENST00000557648 CHGAP10645 457 aaKnown RBP10.1□□□□□ -0.79
MLH3-213ENST00000557648 PHLPP1O60346 1717 aa10.1□□□□□ -0.79
MLH3-213ENST00000557648 PTPRUQ92729 1446 aa10.09□□□□□ -0.79
MLH3-213ENST00000557648 TMEM94Q12767 1356 aa10.09□□□□□ -0.79
MLH3-213ENST00000557648 EID1Q9Y6B2 187 aa10.08□□□□□ -0.8
MLH3-213ENST00000557648 PLEKHG1Q9ULL1 1385 aa10.08□□□□□ -0.8
MLH3-213ENST00000557648 NKTRP30414 1462 aaKnown RBP10.08□□□□□ -0.8
MLH3-213ENST00000557648 DIP2AQ14689 1571 aa10.08□□□□□ -0.8
MLH3-213ENST00000557648 HFM1A2PYH4 1435 aa10.07□□□□□ -0.8
MLH3-213ENST00000557648 SETBP1Q9Y6X0 1596 aa10.07□□□□□ -0.8
MLH3-213ENST00000557648 SLC52A1Q9NWF4 448 aa10.07□□□□□ -0.8
MLH3-213ENST00000557648 COL16A1Q07092 1604 aaPredicted RBP10.05□□□□□ -0.8
MLH3-213ENST00000557648 TOM1O60784 492 aa10.04□□□□□ -0.8
MLH3-213ENST00000557648 KCNA6P17658 529 aa10.04□□□□□ -0.8
MLH3-213ENST00000557648 BCANQ96GW7 911 aa10.04□□□□□ -0.8
MLH3-213ENST00000557648 PROSER2Q86WR7 435 aaPredicted RBP10.03□□□□□ -0.8
MLH3-213ENST00000557648 RGPD8O14715 1765 aaPredicted RBP10.02□□□□□ -0.81
MLH3-213ENST00000557648 PPP1R15AO75807 674 aaPredicted RBP10.02□□□□□ -0.81
MLH3-213ENST00000557648 C1QBPQ07021 282 aaKnown RBP10.02□□□□□ -0.81
MLH3-213ENST00000557648 NHSL1Q5SYE7 1610 aa10.02□□□□□ -0.81
MLH3-213ENST00000557648 ASXL1Q8IXJ9 1541 aa10.02□□□□□ -0.81
MLH3-213ENST00000557648 TRIM52Q96A61 297 aa10.01□□□□□ -0.81
MLH3-213ENST00000557648 METP08581 1390 aa10.01□□□□□ -0.81
MLH3-213ENST00000557648 SHPRHQ149N8 1683 aa9.99□□□□□ -0.81
MLH3-213ENST00000557648 KNDC1Q76NI1 1749 aa9.99□□□□□ -0.81
MLH3-213ENST00000557648 ZNF326Q5BKZ1 582 aaKnown RBP9.98□□□□□ -0.81
MLH3-213ENST00000557648 TBX22Q9Y458 520 aa9.98□□□□□ -0.81
MLH3-213ENST00000557648 AHDC1Q5TGY3 1603 aaPredicted RBP9.97□□□□□ -0.81
MLH3-213ENST00000557648 MSH6P52701 1360 aa9.97□□□□□ -0.81
MLH3-213ENST00000557648 FAM135BQ49AJ0 1406 aa9.97□□□□□ -0.81
MLH3-213ENST00000557648 LRP6O75581 1613 aa9.96□□□□□ -0.81
MLH3-213ENST00000557648 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.96□□□□□ -0.82
MLH3-213ENST00000557648 SLC4A1APQ9BWU0 796 aaKnown RBP9.96□□□□□ -0.82
MLH3-213ENST00000557648 AMOTL2Q9Y2J4 779 aa9.96□□□□□ -0.82
MLH3-213ENST00000557648 RGS17Q9UGC6 210 aaPredicted RBP9.95□□□□□ -0.82
MLH3-213ENST00000557648 MST1RQ04912 1400 aa9.95□□□□□ -0.82
MLH3-213ENST00000557648 SPATA31E1Q6ZUB1 1445 aa9.95□□□□□ -0.82
MLH3-213ENST00000557648 PIK3R4Q99570 1358 aa9.94□□□□□ -0.82
MLH3-213ENST00000557648 KCNA4P22459 653 aa9.94□□□□□ -0.82
MLH3-213ENST00000557648 FMN2Q9NZ56 1722 aa9.93□□□□□ -0.82
MLH3-213ENST00000557648 SETD5Q9C0A6 1442 aa9.93□□□□□ -0.82
MLH3-213ENST00000557648 RAB3GAP2Q9H2M9 1393 aa9.93□□□□□ -0.82
MLH3-213ENST00000557648 ROBO2Q9HCK4 1378 aa9.93□□□□□ -0.82
MLH3-213ENST00000557648 LAMC1P11047 1609 aa9.93□□□□□ -0.82
MLH3-213ENST00000557648 ADGRL3Q9HAR2 1447 aa9.92□□□□□ -0.82
MLH3-213ENST00000557648 ADGRF5Q8IZF2 1346 aa9.92□□□□□ -0.82
MLH3-213ENST00000557648 C14orf37Q86TY3 774 aa9.92□□□□□ -0.82
MLH3-213ENST00000557648 DDX17Q92841 729 aaKnown RBP9.92□□□□□ -0.82
MLH3-213ENST00000557648 MPHOSPH9Q99550 1183 aa9.92□□□□□ -0.82
MLH3-213ENST00000557648 MARF1Q9Y4F3 1742 aaKnown RBP9.92□□□□□ -0.82
MLH3-213ENST00000557648 SOCS7O14512 581 aa9.91□□□□□ -0.82
MLH3-213ENST00000557648 HDGFP51858 240 aaKnown RBP9.91□□□□□ -0.82
MLH3-213ENST00000557648 SLAIN2Q9P270 581 aa9.91□□□□□ -0.82
MLH3-213ENST00000557648 CCDC144AA2RUR9 1427 aa9.9□□□□□ -0.82
MLH3-213ENST00000557648 RGL3Q3MIN7 710 aa9.9□□□□□ -0.82
MLH3-213ENST00000557648 NCOA3Q9Y6Q9 1424 aa9.9□□□□□ -0.83
MLH3-213ENST00000557648 USP32Q8NFA0 1604 aa9.89□□□□□ -0.83
MLH3-213ENST00000557648 PLEKHH1Q9ULM0 1364 aa9.89□□□□□ -0.83
MLH3-213ENST00000557648 ARHGEF28Q8N1W1 1705 aaKnown RBP9.89□□□□□ -0.83
MLH3-213ENST00000557648 PIK3C2GO75747 1445 aa9.89□□□□□ -0.83
MLH3-213ENST00000557648 PTCH1Q13635 1447 aa9.89□□□□□ -0.83
MLH3-213ENST00000557648 CDC42BPGQ6DT37 1551 aa9.88□□□□□ -0.83
MLH3-213ENST00000557648 ABCA3Q99758 1704 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms