RNA–Protein interactions for RNA: ENST00000557581.1

NUMB-228, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 4

Gene NUMB, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-228ENST00000557581 NKTRP30414 1462 aaKnown RBP17.86■□□□□ 0.45
NUMB-228ENST00000557581 ADGRL2O95490 1459 aa17.85■□□□□ 0.45
NUMB-228ENST00000557581 FAM50AQ14320 339 aaKnown RBP17.84■□□□□ 0.45
NUMB-228ENST00000557581 NUTM2DQ5VT03 806 aaPredicted RBP17.83■□□□□ 0.44
NUMB-228ENST00000557581 SLC52A1Q9NWF4 448 aa17.83■□□□□ 0.44
NUMB-228ENST00000557581 SLAIN2Q9P270 581 aa17.83■□□□□ 0.44
NUMB-228ENST00000557581 RIMS2Q9UQ26 1411 aa17.82■□□□□ 0.44
NUMB-228ENST00000557581 MSH6P52701 1360 aa17.82■□□□□ 0.44
NUMB-228ENST00000557581 ANKRD50Q9ULJ7 1429 aa17.81■□□□□ 0.44
NUMB-228ENST00000557581 PLEKHG1Q9ULL1 1385 aa17.81■□□□□ 0.44
NUMB-228ENST00000557581 MYO5BQ9ULV0 1848 aa17.81■□□□□ 0.44
NUMB-228ENST00000557581 SETD1AO15047 1707 aaKnown RBP17.8■□□□□ 0.44
NUMB-228ENST00000557581 GCC2Q8IWJ2 1684 aa17.8■□□□□ 0.44
NUMB-228ENST00000557581 PHLPP1O60346 1717 aa17.79■□□□□ 0.44
NUMB-228ENST00000557581 PPP1R15AO75807 674 aaPredicted RBP17.79■□□□□ 0.44
NUMB-228ENST00000557581 TMEM131LA2VDJ0 1609 aa17.79■□□□□ 0.44
NUMB-228ENST00000557581 RPRD2Q5VT52 1461 aaKnown RBP17.78■□□□□ 0.44
NUMB-228ENST00000557581 CHGAP10645 457 aaKnown RBP17.78■□□□□ 0.44
NUMB-228ENST00000557581 LRP6O75581 1613 aa17.77■□□□□ 0.44
NUMB-228ENST00000557581 JCADQ9P266 1359 aa17.77■□□□□ 0.43
NUMB-228ENST00000557581 CHD2O14647 1828 aaKnown RBP17.77■□□□□ 0.43
NUMB-228ENST00000557581 COL16A1Q07092 1604 aaPredicted RBP17.76■□□□□ 0.43
NUMB-228ENST00000557581 ADAMTS13Q76LX8 1427 aa17.76■□□□□ 0.43
NUMB-228ENST00000557581 TBX22Q9Y458 520 aa17.74■□□□□ 0.43
NUMB-228ENST00000557581 C14orf37Q86TY3 774 aa17.73■□□□□ 0.43
NUMB-228ENST00000557581 E9PCH4 1651 aa17.72■□□□□ 0.43
NUMB-228ENST00000557581 UNC13BO14795 1591 aa17.72■□□□□ 0.43
NUMB-228ENST00000557581 PTPRUQ92729 1446 aa17.72■□□□□ 0.43
NUMB-228ENST00000557581 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.69■□□□□ 0.42
NUMB-228ENST00000557581 HDGFP51858 240 aaKnown RBP17.68■□□□□ 0.42
NUMB-228ENST00000557581 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.68■□□□□ 0.42
NUMB-228ENST00000557581 NCOA3Q9Y6Q9 1424 aa17.67■□□□□ 0.42
NUMB-228ENST00000557581 AMOTL2Q9Y2J4 779 aa17.67■□□□□ 0.42
NUMB-228ENST00000557581 AHDC1Q5TGY3 1603 aaPredicted RBP17.66■□□□□ 0.42
NUMB-228ENST00000557581 MEX3CQ5U5Q3 659 aaKnown RBP17.66■□□□□ 0.42
NUMB-228ENST00000557581 BRINP3Q76B58 766 aa17.66■□□□□ 0.42
NUMB-228ENST00000557581 TRIM52Q96A61 297 aa17.66■□□□□ 0.42
NUMB-228ENST00000557581 C19orf44Q9H6X5 657 aa17.66■□□□□ 0.42
NUMB-228ENST00000557581 ATF3P18847 181 aa17.65■□□□□ 0.42
NUMB-228ENST00000557581 CADPS2Q86UW7 1296 aa17.65■□□□□ 0.42
NUMB-228ENST00000557581 SPATA31A6Q5VVP1 1343 aa17.65■□□□□ 0.42
NUMB-228ENST00000557581 DIP2AQ14689 1571 aa17.65■□□□□ 0.42
NUMB-228ENST00000557581 IQGAP3Q86VI3 1631 aa17.65■□□□□ 0.42
NUMB-228ENST00000557581 ITGAEP38570 1179 aa17.64■□□□□ 0.41
NUMB-228ENST00000557581 NUP155O75694 1391 aa17.64■□□□□ 0.41
NUMB-228ENST00000557581 NUTM2BA6NNL0 878 aaPredicted RBP17.63■□□□□ 0.41
NUMB-228ENST00000557581 NUTM2EB1AL46 878 aaPredicted RBP17.63■□□□□ 0.41
NUMB-228ENST00000557581 NUTM2AQ8IVF1 878 aaPredicted RBP17.63■□□□□ 0.41
NUMB-228ENST00000557581 PIK3R4Q99570 1358 aa17.63■□□□□ 0.41
NUMB-228ENST00000557581 TRPM2O94759 1503 aa17.62■□□□□ 0.41
NUMB-228ENST00000557581 NRXN3Q9Y4C0 1643 aa17.62■□□□□ 0.41
NUMB-228ENST00000557581 UPF1Q92900 1129 aaKnown RBP eCLIP17.62■□□□□ 0.41
NUMB-228ENST00000557581 ROCK1Q13464 1354 aa17.62■□□□□ 0.41
NUMB-228ENST00000557581 PPARGC1BQ86YN6 1023 aaKnown RBP17.61■□□□□ 0.41
NUMB-228ENST00000557581 DDX17Q92841 729 aaKnown RBP17.61■□□□□ 0.41
NUMB-228ENST00000557581 SHPRHQ149N8 1683 aa17.61■□□□□ 0.41
NUMB-228ENST00000557581 ZNF772Q68DY9 489 aaPredicted RBP17.6■□□□□ 0.41
NUMB-228ENST00000557581 METP08581 1390 aa17.6■□□□□ 0.41
NUMB-228ENST00000557581 ASXL1Q8IXJ9 1541 aa17.59■□□□□ 0.41
NUMB-228ENST00000557581 XRN1Q8IZH2 1706 aaKnown RBP17.58■□□□□ 0.41
NUMB-228ENST00000557581 MST1RQ04912 1400 aa17.58■□□□□ 0.41
NUMB-228ENST00000557581 AFF2P51816 1311 aa17.56■□□□□ 0.4
NUMB-228ENST00000557581 SETBP1Q9Y6X0 1596 aa17.56■□□□□ 0.4
NUMB-228ENST00000557581 RXRBP28702 533 aa17.55■□□□□ 0.4
NUMB-228ENST00000557581 ZNF326Q5BKZ1 582 aaKnown RBP17.55■□□□□ 0.4
NUMB-228ENST00000557581 DCCP43146 1447 aa17.55■□□□□ 0.4
NUMB-228ENST00000557581 SETD5Q9C0A6 1442 aa17.54■□□□□ 0.4
NUMB-228ENST00000557581 NHSL1Q5SYE7 1610 aa17.51■□□□□ 0.39
NUMB-228ENST00000557581 SPHKAPQ2M3C7 1700 aa17.51■□□□□ 0.39
NUMB-228ENST00000557581 ADGRL3Q9HAR2 1447 aa17.51■□□□□ 0.39
NUMB-228ENST00000557581 PNPLA6Q8IY17 1366 aa17.51■□□□□ 0.39
NUMB-228ENST00000557581 CLTCL1P53675 1640 aa17.5■□□□□ 0.39
NUMB-228ENST00000557581 C8orf37Q96NL8 207 aa17.5■□□□□ 0.39
NUMB-228ENST00000557581 NEXMIFQ5QGS0 1516 aa17.5■□□□□ 0.39
NUMB-228ENST00000557581 NALCNQ8IZF0 1738 aa17.5■□□□□ 0.39
NUMB-228ENST00000557581 RGS12O14924 1447 aa17.49■□□□□ 0.39
NUMB-228ENST00000557581 LRRC59Q96AG4 307 aaKnown RBP17.48■□□□□ 0.39
NUMB-228ENST00000557581 CDK12Q9NYV4 1490 aaPredicted RBP17.48■□□□□ 0.39
NUMB-228ENST00000557581 QTRT2Q9H974 415 aaKnown RBP17.47■□□□□ 0.39
NUMB-228ENST00000557581 ADAMTS2O95450 1211 aa17.46■□□□□ 0.39
NUMB-228ENST00000557581 C1orf167Q5SNV9 1468 aa17.45■□□□□ 0.38
NUMB-228ENST00000557581 ORAI2Q96SN7 254 aa17.45■□□□□ 0.38
NUMB-228ENST00000557581 ROBO2Q9HCK4 1378 aa17.44■□□□□ 0.38
NUMB-228ENST00000557581 RBM6P78332 1123 aaKnown RBP17.41■□□□□ 0.38
NUMB-228ENST00000557581 NGLY1Q96IV0 654 aa17.41■□□□□ 0.38
NUMB-228ENST00000557581 NAIPQ13075 1403 aa17.39■□□□□ 0.38
NUMB-228ENST00000557581 SOS2Q07890 1332 aaPredicted RBP17.39■□□□□ 0.37
NUMB-228ENST00000557581 PTCH1Q13635 1447 aa17.38■□□□□ 0.37
NUMB-228ENST00000557581 SRCAPQ6ZRS2 3230 aa17.37■□□□□ 0.37
NUMB-228ENST00000557581 LAMC1P11047 1609 aa17.36■□□□□ 0.37
NUMB-228ENST00000557581 USP21Q9UK80 565 aa17.35■□□□□ 0.37
NUMB-228ENST00000557581 KIF1BO60333 1816 aa17.34■□□□□ 0.37
NUMB-228ENST00000557581 XPCQ01831 940 aaPredicted RBP17.34■□□□□ 0.37
NUMB-228ENST00000557581 RRBP1Q9P2E9 1410 aaKnown RBP17.34■□□□□ 0.37
NUMB-228ENST00000557581 VGFO15240 615 aaPredicted RBP17.33■□□□□ 0.36
NUMB-228ENST00000557581 FOXD1Q16676 465 aa17.33■□□□□ 0.36
NUMB-228ENST00000557581 PRAG1Q86YV5 1406 aa17.31■□□□□ 0.36
NUMB-228ENST00000557581 FNBP4Q8N3X1 1017 aaPredicted RBP17.31■□□□□ 0.36
NUMB-228ENST00000557581 ATRNO75882 1429 aa17.3■□□□□ 0.36
NUMB-228ENST00000557581 NUTM2FA1L443 756 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms