RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-225ENST00000557559 SPATA31A6Q5VVP1 1343 aa11.59□□□□□ -0.55
PRKCH-225ENST00000557559 ZNF772Q68DY9 489 aaPredicted RBP11.58□□□□□ -0.56
PRKCH-225ENST00000557559 SLC26A8Q96RN1 970 aa11.58□□□□□ -0.56
PRKCH-225ENST00000557559 SLAIN2Q9P270 581 aa11.58□□□□□ -0.56
PRKCH-225ENST00000557559 NOS1P29475 1434 aa11.58□□□□□ -0.56
PRKCH-225ENST00000557559 RPRD2Q5VT52 1461 aaKnown RBP11.57□□□□□ -0.56
PRKCH-225ENST00000557559 PTPN23Q9H3S7 1636 aa11.57□□□□□ -0.56
PRKCH-225ENST00000557559 SHPRHQ149N8 1683 aa11.57□□□□□ -0.56
PRKCH-225ENST00000557559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.57□□□□□ -0.56
PRKCH-225ENST00000557559 ABCC5O15440 1437 aa11.57□□□□□ -0.56
PRKCH-225ENST00000557559 DAPK1P53355 1430 aa11.57□□□□□ -0.56
PRKCH-225ENST00000557559 AHDC1Q5TGY3 1603 aaPredicted RBP11.57□□□□□ -0.56
PRKCH-225ENST00000557559 ANKRD30AQ9BXX3 1397 aa11.56□□□□□ -0.56
PRKCH-225ENST00000557559 PLEKHG1Q9ULL1 1385 aa11.56□□□□□ -0.56
PRKCH-225ENST00000557559 CHD2O14647 1828 aaKnown RBP11.56□□□□□ -0.56
PRKCH-225ENST00000557559 IDI1Q13907 227 aa11.56□□□□□ -0.56
PRKCH-225ENST00000557559 DIP2AQ14689 1571 aa11.56□□□□□ -0.56
PRKCH-225ENST00000557559 SLC52A1Q9NWF4 448 aa11.56□□□□□ -0.56
PRKCH-225ENST00000557559 MEX3CQ5U5Q3 659 aaKnown RBP11.55□□□□□ -0.56
PRKCH-225ENST00000557559 BCANQ96GW7 911 aa11.55□□□□□ -0.56
PRKCH-225ENST00000557559 RRP7BPQ9NSQ0 103 aa11.55□□□□□ -0.56
PRKCH-225ENST00000557559 LRP6O75581 1613 aa11.55□□□□□ -0.56
PRKCH-225ENST00000557559 CDK12Q9NYV4 1490 aaPredicted RBP11.55□□□□□ -0.56
PRKCH-225ENST00000557559 ZFYVE9O95405 1425 aa11.54□□□□□ -0.56
PRKCH-225ENST00000557559 HDGFP51858 240 aaKnown RBP11.54□□□□□ -0.56
PRKCH-225ENST00000557559 GCC2Q8IWJ2 1684 aa11.53□□□□□ -0.56
PRKCH-225ENST00000557559 NPM3O75607 178 aaKnown RBP11.53□□□□□ -0.56
PRKCH-225ENST00000557559 PPP1R15AO75807 674 aaPredicted RBP11.53□□□□□ -0.56
PRKCH-225ENST00000557559 RBM33Q96EV2 1170 aaKnown RBP11.53□□□□□ -0.56
PRKCH-225ENST00000557559 CADPS2Q86UW7 1296 aa11.52□□□□□ -0.57
PRKCH-225ENST00000557559 UPF1Q92900 1129 aaKnown RBP eCLIP11.52□□□□□ -0.57
PRKCH-225ENST00000557559 RIMS2Q9UQ26 1411 aa11.52□□□□□ -0.57
PRKCH-225ENST00000557559 KANK4Q5T7N3 995 aaPredicted RBP11.51□□□□□ -0.57
PRKCH-225ENST00000557559 C14orf37Q86TY3 774 aa11.51□□□□□ -0.57
PRKCH-225ENST00000557559 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.51□□□□□ -0.57
PRKCH-225ENST00000557559 PIK3R4Q99570 1358 aa11.51□□□□□ -0.57
PRKCH-225ENST00000557559 DCCP43146 1447 aa11.51□□□□□ -0.57
PRKCH-225ENST00000557559 TMEM131LA2VDJ0 1609 aa11.5□□□□□ -0.57
PRKCH-225ENST00000557559 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.5□□□□□ -0.57
PRKCH-225ENST00000557559 TRIM52Q96A61 297 aa11.5□□□□□ -0.57
PRKCH-225ENST00000557559 ADGRL2O95490 1459 aa11.5□□□□□ -0.57
PRKCH-225ENST00000557559 MYO5BQ9ULV0 1848 aa11.49□□□□□ -0.57
PRKCH-225ENST00000557559 ATF3P18847 181 aa11.49□□□□□ -0.57
PRKCH-225ENST00000557559 RXRBP28702 533 aa11.49□□□□□ -0.57
PRKCH-225ENST00000557559 TBX22Q9Y458 520 aa11.49□□□□□ -0.57
PRKCH-225ENST00000557559 TRPM2O94759 1503 aa11.49□□□□□ -0.57
PRKCH-225ENST00000557559 C19orf44Q9H6X5 657 aa11.48□□□□□ -0.57
PRKCH-225ENST00000557559 APLP2Q06481 763 aa11.47□□□□□ -0.57
PRKCH-225ENST00000557559 NHSL1Q5SYE7 1610 aa11.46□□□□□ -0.58
PRKCH-225ENST00000557559 ASXL1Q8IXJ9 1541 aa11.45□□□□□ -0.58
PRKCH-225ENST00000557559 ADAMTS13Q76LX8 1427 aa11.45□□□□□ -0.58
PRKCH-225ENST00000557559 ANKRD50Q9ULJ7 1429 aa11.45□□□□□ -0.58
PRKCH-225ENST00000557559 UNC13BO14795 1591 aa11.45□□□□□ -0.58
PRKCH-225ENST00000557559 SETD5Q9C0A6 1442 aa11.44□□□□□ -0.58
PRKCH-225ENST00000557559 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
PRKCH-225ENST00000557559 AFF2P51816 1311 aa11.43□□□□□ -0.58
PRKCH-225ENST00000557559 BRINP3Q76B58 766 aa11.43□□□□□ -0.58
PRKCH-225ENST00000557559 SRCAPQ6ZRS2 3230 aa11.43□□□□□ -0.58
PRKCH-225ENST00000557559 XRN1Q8IZH2 1706 aaKnown RBP11.43□□□□□ -0.58
PRKCH-225ENST00000557559 NUTM2BA6NNL0 878 aaPredicted RBP11.42□□□□□ -0.58
PRKCH-225ENST00000557559 NUTM2EB1AL46 878 aaPredicted RBP11.42□□□□□ -0.58
PRKCH-225ENST00000557559 NUTM2AQ8IVF1 878 aaPredicted RBP11.42□□□□□ -0.58
PRKCH-225ENST00000557559 RGS12O14924 1447 aa11.42□□□□□ -0.58
PRKCH-225ENST00000557559 E9PCH4 1651 aa11.41□□□□□ -0.58
PRKCH-225ENST00000557559 IQGAP3Q86VI3 1631 aa11.41□□□□□ -0.58
PRKCH-225ENST00000557559 CHGAP10645 457 aaKnown RBP11.4□□□□□ -0.58
PRKCH-225ENST00000557559 RBM6P78332 1123 aaKnown RBP11.4□□□□□ -0.58
PRKCH-225ENST00000557559 LRRC59Q96AG4 307 aaKnown RBP11.4□□□□□ -0.58
PRKCH-225ENST00000557559 MST1RQ04912 1400 aa11.4□□□□□ -0.58
PRKCH-225ENST00000557559 SETBP1Q9Y6X0 1596 aa11.4□□□□□ -0.58
PRKCH-225ENST00000557559 ATAD2Q6PL18 1390 aa11.4□□□□□ -0.59
PRKCH-225ENST00000557559 NGLY1Q96IV0 654 aa11.39□□□□□ -0.59
PRKCH-225ENST00000557559 RNF216Q9NWF9 866 aaPredicted RBP11.39□□□□□ -0.59
PRKCH-225ENST00000557559 AMOTL2Q9Y2J4 779 aa11.39□□□□□ -0.59
PRKCH-225ENST00000557559 ADGRL3Q9HAR2 1447 aa11.38□□□□□ -0.59
PRKCH-225ENST00000557559 HOXD11P31277 338 aaPredicted RBP11.38□□□□□ -0.59
PRKCH-225ENST00000557559 PNPLA6Q8IY17 1366 aa11.38□□□□□ -0.59
PRKCH-225ENST00000557559 PTPRUQ92729 1446 aa11.37□□□□□ -0.59
PRKCH-225ENST00000557559 C8orf37Q96NL8 207 aa11.37□□□□□ -0.59
PRKCH-225ENST00000557559 NRXN3Q9Y4C0 1643 aa11.37□□□□□ -0.59
PRKCH-225ENST00000557559 LAMC1P11047 1609 aa11.36□□□□□ -0.59
PRKCH-225ENST00000557559 NUTM2DQ5VT03 806 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-225ENST00000557559 QTRT2Q9H974 415 aaKnown RBP11.36□□□□□ -0.59
PRKCH-225ENST00000557559 NALCNQ8IZF0 1738 aa11.35□□□□□ -0.59
PRKCH-225ENST00000557559 FAM50AQ14320 339 aaKnown RBP11.35□□□□□ -0.59
PRKCH-225ENST00000557559 ROCK1Q13464 1354 aa11.33□□□□□ -0.6
PRKCH-225ENST00000557559 SPHKAPQ2M3C7 1700 aa11.33□□□□□ -0.6
PRKCH-225ENST00000557559 ZRANB1Q9UGI0 708 aa11.33□□□□□ -0.6
PRKCH-225ENST00000557559 PTCH1Q13635 1447 aa11.33□□□□□ -0.6
PRKCH-225ENST00000557559 COL22A1Q8NFW1 1626 aaPredicted RBP11.31□□□□□ -0.6
PRKCH-225ENST00000557559 EP400Q96L91 3159 aa11.31□□□□□ -0.6
PRKCH-225ENST00000557559 TRPC5Q9UL62 973 aaPredicted RBP11.31□□□□□ -0.6
PRKCH-225ENST00000557559 NUP155O75694 1391 aa11.3□□□□□ -0.6
PRKCH-225ENST00000557559 LOC105371045A0A1W2PR82 267 aa11.3□□□□□ -0.6
PRKCH-225ENST00000557559 CCDC125Q86Z20 511 aa11.3□□□□□ -0.6
PRKCH-225ENST00000557559 USP21Q9UK80 565 aa11.3□□□□□ -0.6
PRKCH-225ENST00000557559 C1orf167Q5SNV9 1468 aa11.3□□□□□ -0.6
PRKCH-225ENST00000557559 METP08581 1390 aa11.29□□□□□ -0.6
PRKCH-225ENST00000557559 ADAMTS2O95450 1211 aa11.29□□□□□ -0.6
PRKCH-225ENST00000557559 ZNF326Q5BKZ1 582 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms