RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 IFT172Q9UG01 1749 aa15.67■□□□□ 0.1
HNRNPC-232ENST00000557442 ZFYVE9O95405 1425 aa15.66■□□□□ 0.1
HNRNPC-232ENST00000557442 HRCP23327 699 aa15.66■□□□□ 0.1
HNRNPC-232ENST00000557442 CCDC144AA2RUR9 1427 aa15.65■□□□□ 0.1
HNRNPC-232ENST00000557442 RIMS2Q9UQ26 1411 aa15.65■□□□□ 0.1
HNRNPC-232ENST00000557442 EID1Q9Y6B2 187 aa15.65■□□□□ 0.1
HNRNPC-232ENST00000557442 STRCP1A6NGW2 1772 aa15.64■□□□□ 0.09
HNRNPC-232ENST00000557442 NEXMIFQ5QGS0 1516 aa15.64■□□□□ 0.09
HNRNPC-232ENST00000557442 TXNDC2Q86VQ3 553 aa15.64■□□□□ 0.09
HNRNPC-232ENST00000557442 LTKP29376 864 aa15.63■□□□□ 0.09
HNRNPC-232ENST00000557442 LTBP4Q8N2S1 1624 aa15.61■□□□□ 0.09
HNRNPC-232ENST00000557442 NRXN3Q9Y4C0 1643 aa15.6■□□□□ 0.09
HNRNPC-232ENST00000557442 PPP1R15AO75807 674 aaPredicted RBP15.6■□□□□ 0.09
HNRNPC-232ENST00000557442 ZNF326Q5BKZ1 582 aaKnown RBP15.6■□□□□ 0.09
HNRNPC-232ENST00000557442 CHD2O14647 1828 aaKnown RBP15.59■□□□□ 0.09
HNRNPC-232ENST00000557442 DIP2AQ14689 1571 aa15.59■□□□□ 0.09
HNRNPC-232ENST00000557442 ZNF335Q9H4Z2 1342 aaPredicted RBP15.57■□□□□ 0.08
HNRNPC-232ENST00000557442 PLEKHG1Q9ULL1 1385 aa15.57■□□□□ 0.08
HNRNPC-232ENST00000557442 HDGFP51858 240 aaKnown RBP15.57■□□□□ 0.08
HNRNPC-232ENST00000557442 NUTM2DQ5VT03 806 aaPredicted RBP15.57■□□□□ 0.08
HNRNPC-232ENST00000557442 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.57■□□□□ 0.08
HNRNPC-232ENST00000557442 SETBP1Q9Y6X0 1596 aa15.56■□□□□ 0.08
HNRNPC-232ENST00000557442 SETD1AO15047 1707 aaKnown RBP15.56■□□□□ 0.08
HNRNPC-232ENST00000557442 SPATA31E1Q6ZUB1 1445 aa15.56■□□□□ 0.08
HNRNPC-232ENST00000557442 XIRP1Q702N8 1843 aaKnown RBP15.56■□□□□ 0.08
HNRNPC-232ENST00000557442 ANKRD30BQ9BXX2 1392 aa15.55■□□□□ 0.08
HNRNPC-232ENST00000557442 CPS1P31327 1500 aa15.55■□□□□ 0.08
HNRNPC-232ENST00000557442 BCANQ96GW7 911 aa15.55■□□□□ 0.08
HNRNPC-232ENST00000557442 NWD1Q149M9 1564 aa15.55■□□□□ 0.08
HNRNPC-232ENST00000557442 ADAMTS13Q76LX8 1427 aa15.51■□□□□ 0.07
HNRNPC-232ENST00000557442 SLC26A8Q96RN1 970 aa15.51■□□□□ 0.07
HNRNPC-232ENST00000557442 RGL3Q3MIN7 710 aa15.5■□□□□ 0.07
HNRNPC-232ENST00000557442 RPGRIP1LQ68CZ1 1315 aa15.5■□□□□ 0.07
HNRNPC-232ENST00000557442 LAMC1P11047 1609 aa15.49■□□□□ 0.07
HNRNPC-232ENST00000557442 CERKQ8TCT0 537 aa15.49■□□□□ 0.07
HNRNPC-232ENST00000557442 XRN1Q8IZH2 1706 aaKnown RBP15.49■□□□□ 0.07
HNRNPC-232ENST00000557442 IQSEC2Q5JU85 1478 aa15.49■□□□□ 0.07
HNRNPC-232ENST00000557442 DHX57Q6P158 1386 aaKnown RBP15.48■□□□□ 0.07
HNRNPC-232ENST00000557442 ALKQ9UM73 1620 aa15.48■□□□□ 0.07
HNRNPC-232ENST00000557442 PCGF6Q9BYE7 350 aa15.47■□□□□ 0.07
HNRNPC-232ENST00000557442 NKTRP30414 1462 aaKnown RBP15.47■□□□□ 0.07
HNRNPC-232ENST00000557442 MYOM2P54296 1465 aa15.47■□□□□ 0.07
HNRNPC-232ENST00000557442 VGFO15240 615 aaPredicted RBP15.46■□□□□ 0.07
HNRNPC-232ENST00000557442 LRRC7Q96NW7 1537 aa15.45■□□□□ 0.06
HNRNPC-232ENST00000557442 PIK3R4Q99570 1358 aa15.44■□□□□ 0.06
HNRNPC-232ENST00000557442 TBX22Q9Y458 520 aa15.43■□□□□ 0.06
HNRNPC-232ENST00000557442 KNDC1Q76NI1 1749 aa15.43■□□□□ 0.06
HNRNPC-232ENST00000557442 PIK3C2GO75747 1445 aa15.43■□□□□ 0.06
HNRNPC-232ENST00000557442 NRXN1Q9ULB1 1477 aa15.42■□□□□ 0.06
HNRNPC-232ENST00000557442 ADGRF5Q8IZF2 1346 aa15.42■□□□□ 0.06
HNRNPC-232ENST00000557442 KCNA6P17658 529 aa15.42■□□□□ 0.06
HNRNPC-232ENST00000557442 PTPRUQ92729 1446 aa15.4■□□□□ 0.06
HNRNPC-232ENST00000557442 METP08581 1390 aa15.4■□□□□ 0.06
HNRNPC-232ENST00000557442 ASXL1Q8IXJ9 1541 aa15.4■□□□□ 0.06
HNRNPC-232ENST00000557442 NALCNQ8IZF0 1738 aa15.4■□□□□ 0.06
HNRNPC-232ENST00000557442 KIAA1210Q9ULL0 1709 aa15.39■□□□□ 0.05
HNRNPC-232ENST00000557442 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.38■□□□□ 0.05
HNRNPC-232ENST00000557442 DCAF11Q8TEB1 546 aa15.37■□□□□ 0.05
HNRNPC-232ENST00000557442 TMEM94Q12767 1356 aa15.37■□□□□ 0.05
HNRNPC-232ENST00000557442 PROSER2Q86WR7 435 aaPredicted RBP15.36■□□□□ 0.05
HNRNPC-232ENST00000557442 FBXO41Q8TF61 875 aa15.36■□□□□ 0.05
HNRNPC-232ENST00000557442 SIN3AQ96ST3 1273 aa15.36■□□□□ 0.05
HNRNPC-232ENST00000557442 AMOTL2Q9Y2J4 779 aa15.35■□□□□ 0.05
HNRNPC-232ENST00000557442 KDM2AQ9Y2K7 1162 aa15.35■□□□□ 0.05
HNRNPC-232ENST00000557442 PTCH1Q13635 1447 aa15.34■□□□□ 0.05
HNRNPC-232ENST00000557442 NEUROD1Q13562 356 aa15.34■□□□□ 0.05
HNRNPC-232ENST00000557442 RBM33Q96EV2 1170 aaKnown RBP15.34■□□□□ 0.05
HNRNPC-232ENST00000557442 ARHGEF28Q8N1W1 1705 aaKnown RBP15.33■□□□□ 0.04
HNRNPC-232ENST00000557442 TRPM1Q7Z4N2 1603 aa15.33■□□□□ 0.04
HNRNPC-232ENST00000557442 PRAG1Q86YV5 1406 aa15.33■□□□□ 0.04
HNRNPC-232ENST00000557442 ADGRB1O14514 1584 aa15.32■□□□□ 0.04
HNRNPC-232ENST00000557442 UBAP1LF5GYI3 381 aa15.32■□□□□ 0.04
HNRNPC-232ENST00000557442 MSH6P52701 1360 aa15.31■□□□□ 0.04
HNRNPC-232ENST00000557442 STAC3Q96MF2 364 aa15.31■□□□□ 0.04
HNRNPC-232ENST00000557442 CFAP70Q5T0N1 1121 aa15.3■□□□□ 0.04
HNRNPC-232ENST00000557442 ILDR1Q86SU0 546 aaPredicted RBP15.3■□□□□ 0.04
HNRNPC-232ENST00000557442 C14orf37Q86TY3 774 aa15.3■□□□□ 0.04
HNRNPC-232ENST00000557442 C14orf93Q9H972 538 aaKnown RBP15.3■□□□□ 0.04
HNRNPC-232ENST00000557442 YTHDC2Q9H6S0 1430 aaKnown RBP15.3■□□□□ 0.04
HNRNPC-232ENST00000557442 NCOA3Q9Y6Q9 1424 aa15.3■□□□□ 0.04
HNRNPC-232ENST00000557442 ROBO1Q9Y6N7 1651 aa15.29■□□□□ 0.04
HNRNPC-232ENST00000557442 TECPR2O15040 1411 aa15.29■□□□□ 0.04
HNRNPC-232ENST00000557442 TMEM132EQ6IEE7 984 aa15.29■□□□□ 0.04
HNRNPC-232ENST00000557442 LRPPRCP42704 1394 aaKnown RBP15.28■□□□□ 0.04
HNRNPC-232ENST00000557442 ROBO2Q9HCK4 1378 aa15.28■□□□□ 0.04
HNRNPC-232ENST00000557442 TOM1O60784 492 aa15.28■□□□□ 0.04
HNRNPC-232ENST00000557442 L3MBTL2Q969R5 705 aa15.28■□□□□ 0.04
HNRNPC-232ENST00000557442 TONSLQ96HA7 1378 aa15.28■□□□□ 0.04
HNRNPC-232ENST00000557442 ADGRL3Q9HAR2 1447 aa15.27■□□□□ 0.04
HNRNPC-232ENST00000557442 STK26Q9P289 416 aa15.27■□□□□ 0.04
HNRNPC-232ENST00000557442 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.03
HNRNPC-232ENST00000557442 DLC1Q96QB1 1528 aa15.26■□□□□ 0.03
HNRNPC-232ENST00000557442 DCCP43146 1447 aa15.26■□□□□ 0.03
HNRNPC-232ENST00000557442 CDC42BPGQ6DT37 1551 aa15.25■□□□□ 0.03
HNRNPC-232ENST00000557442 PIP4K2BP78356 416 aa15.25■□□□□ 0.03
HNRNPC-232ENST00000557442 ABCC11Q96J66 1382 aa15.25■□□□□ 0.03
HNRNPC-232ENST00000557442 RGPD8O14715 1765 aaPredicted RBP15.25■□□□□ 0.03
HNRNPC-232ENST00000557442 FMN2Q9NZ56 1722 aa15.24■□□□□ 0.03
HNRNPC-232ENST00000557442 QRICH2Q9H0J4 1663 aa15.23■□□□□ 0.03
HNRNPC-232ENST00000557442 C19orf44Q9H6X5 657 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms