RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 RPRD2Q5VT52 1461 aaKnown RBP10.07□□□□□ -0.8
MTHFD1-215ENST00000557370 MPHOSPH9Q99550 1183 aa10.07□□□□□ -0.8
MTHFD1-215ENST00000557370 ADGRL2O95490 1459 aa10.06□□□□□ -0.8
MTHFD1-215ENST00000557370 NLRP1Q9C000 1473 aa10.06□□□□□ -0.8
MTHFD1-215ENST00000557370 PREX2Q70Z35 1606 aa10.06□□□□□ -0.8
MTHFD1-215ENST00000557370 ATP7AQ04656 1500 aa10.06□□□□□ -0.8
MTHFD1-215ENST00000557370 KDM5DQ9BY66 1539 aa10.06□□□□□ -0.8
MTHFD1-215ENST00000557370 ATAD2Q6PL18 1390 aa10.05□□□□□ -0.8
MTHFD1-215ENST00000557370 LRP6O75581 1613 aa10.05□□□□□ -0.8
MTHFD1-215ENST00000557370 IFFO2Q5TF58 517 aa10.05□□□□□ -0.8
MTHFD1-215ENST00000557370 XIRP1Q702N8 1843 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-215ENST00000557370 PLXNC1O60486 1568 aa10.05□□□□□ -0.8
MTHFD1-215ENST00000557370 DSG3P32926 999 aa10.04□□□□□ -0.8
MTHFD1-215ENST00000557370 ABCC5O15440 1437 aa10.04□□□□□ -0.8
MTHFD1-215ENST00000557370 PZPP20742 1482 aa10.04□□□□□ -0.8
MTHFD1-215ENST00000557370 TMEM94Q12767 1356 aa10.03□□□□□ -0.8
MTHFD1-215ENST00000557370 ANKRD30BQ9BXX2 1392 aa10.03□□□□□ -0.8
MTHFD1-215ENST00000557370 RGS12O14924 1447 aa10.03□□□□□ -0.8
MTHFD1-215ENST00000557370 SYCP2Q9BX26 1530 aa10.02□□□□□ -0.8
MTHFD1-215ENST00000557370 RRP7BPQ9NSQ0 103 aa10.02□□□□□ -0.81
MTHFD1-215ENST00000557370 CROCC2H7BZ55 1655 aa10.02□□□□□ -0.81
MTHFD1-215ENST00000557370 AFF2P51816 1311 aa10.02□□□□□ -0.81
MTHFD1-215ENST00000557370 ANKRD30AQ9BXX3 1397 aa10.01□□□□□ -0.81
MTHFD1-215ENST00000557370 PROSER2Q86WR7 435 aaPredicted RBP10.01□□□□□ -0.81
MTHFD1-215ENST00000557370 ZC3H13Q5T200 1668 aaKnown RBP10.01□□□□□ -0.81
MTHFD1-215ENST00000557370 MSH6P52701 1360 aa10.01□□□□□ -0.81
MTHFD1-215ENST00000557370 SCAF11Q99590 1463 aaKnown RBP10□□□□□ -0.81
MTHFD1-215ENST00000557370 RBM6P78332 1123 aaKnown RBP10□□□□□ -0.81
MTHFD1-215ENST00000557370 RSPH4AQ5TD94 716 aa10□□□□□ -0.81
MTHFD1-215ENST00000557370 WASHC2CQ9Y4E1 1318 aa10□□□□□ -0.81
MTHFD1-215ENST00000557370 CAMSAP2Q08AD1 1489 aa9.99□□□□□ -0.81
MTHFD1-215ENST00000557370 CAPN15O75808 1086 aa9.99□□□□□ -0.81
MTHFD1-215ENST00000557370 HSPA5P11021 654 aaKnown RBP9.99□□□□□ -0.81
MTHFD1-215ENST00000557370 HNRNPMP52272 730 aaKnown RBP eCLIP9.99□□□□□ -0.81
MTHFD1-215ENST00000557370 SLAIN2Q9P270 581 aa9.99□□□□□ -0.81
MTHFD1-215ENST00000557370 CFDP1Q9UEE9 299 aaPredicted RBP9.99□□□□□ -0.81
MTHFD1-215ENST00000557370 INO80Q9ULG1 1556 aaPredicted RBP9.99□□□□□ -0.81
MTHFD1-215ENST00000557370 ROCK2O75116 1388 aaKnown RBP9.99□□□□□ -0.81
MTHFD1-215ENST00000557370 COL16A1Q07092 1604 aaPredicted RBP9.98□□□□□ -0.81
MTHFD1-215ENST00000557370 YY1P25490 414 aa9.98□□□□□ -0.81
MTHFD1-215ENST00000557370 L3MBTL2Q969R5 705 aa9.98□□□□□ -0.81
MTHFD1-215ENST00000557370 NGLY1Q96IV0 654 aa9.98□□□□□ -0.81
MTHFD1-215ENST00000557370 SLC4A1APQ9BWU0 796 aaKnown RBP9.98□□□□□ -0.81
MTHFD1-215ENST00000557370 QTRT2Q9H974 415 aaKnown RBP9.98□□□□□ -0.81
MTHFD1-215ENST00000557370 CHIC2Q9UKJ5 165 aa9.98□□□□□ -0.81
MTHFD1-215ENST00000557370 EID1Q9Y6B2 187 aa9.98□□□□□ -0.81
MTHFD1-215ENST00000557370 CCDC7Q96M83 1385 aa9.98□□□□□ -0.81
MTHFD1-215ENST00000557370 KIAA1107Q9UPP5 1409 aa9.98□□□□□ -0.81
MTHFD1-215ENST00000557370 GPATCH8Q9UKJ3 1502 aaKnown RBP9.97□□□□□ -0.81
MTHFD1-215ENST00000557370 KIF3BO15066 747 aa9.97□□□□□ -0.81
MTHFD1-215ENST00000557370 FKBP8Q14318 412 aa9.97□□□□□ -0.81
MTHFD1-215ENST00000557370 TXNDC2Q86VQ3 553 aa9.97□□□□□ -0.81
MTHFD1-215ENST00000557370 WASHC2AQ641Q2 1341 aa9.97□□□□□ -0.81
MTHFD1-215ENST00000557370 KTN1Q86UP2 1357 aaKnown RBP9.97□□□□□ -0.81
MTHFD1-215ENST00000557370 ARHGEF5Q12774 1597 aa9.97□□□□□ -0.81
MTHFD1-215ENST00000557370 NCBP3Q53F19 620 aaKnown RBP9.96□□□□□ -0.82
MTHFD1-215ENST00000557370 C8orf37Q96NL8 207 aa9.96□□□□□ -0.82
MTHFD1-215ENST00000557370 SPATA31E1Q6ZUB1 1445 aa9.96□□□□□ -0.82
MTHFD1-215ENST00000557370 LRP5O75197 1615 aa9.95□□□□□ -0.82
MTHFD1-215ENST00000557370 SHPRHQ149N8 1683 aa9.95□□□□□ -0.82
MTHFD1-215ENST00000557370 CDC42BPAQ5VT25 1732 aa9.95□□□□□ -0.82
MTHFD1-215ENST00000557370 C14orf37Q86TY3 774 aa9.94□□□□□ -0.82
MTHFD1-215ENST00000557370 TSHZ2Q9NRE2 1034 aa9.94□□□□□ -0.82
MTHFD1-215ENST00000557370 PLEKHH2Q8IVE3 1493 aa9.93□□□□□ -0.82
MTHFD1-215ENST00000557370 MBD5Q9P267 1494 aa9.93□□□□□ -0.82
MTHFD1-215ENST00000557370 KCNA6P17658 529 aa9.93□□□□□ -0.82
MTHFD1-215ENST00000557370 CCDC125Q86Z20 511 aa9.93□□□□□ -0.82
MTHFD1-215ENST00000557370 ANKRD50Q9ULJ7 1429 aa9.92□□□□□ -0.82
MTHFD1-215ENST00000557370 ZBED9Q6R2W3 1325 aa9.92□□□□□ -0.82
MTHFD1-215ENST00000557370 TSPY4P0CV99 314 aa9.92□□□□□ -0.82
MTHFD1-215ENST00000557370 TSPY10P0CW01 314 aa9.92□□□□□ -0.82
MTHFD1-215ENST00000557370 HNRNPUQ00839 825 aaKnown RBP eCLIP9.92□□□□□ -0.82
MTHFD1-215ENST00000557370 PRKRIP1Q9H875 184 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-215ENST00000557370 PRDM15P57071 1507 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-215ENST00000557370 LTKP29376 864 aa9.91□□□□□ -0.82
MTHFD1-215ENST00000557370 BCANQ96GW7 911 aa9.91□□□□□ -0.82
MTHFD1-215ENST00000557370 SPINK5Q9NQ38 1064 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-215ENST00000557370 RALGAPBQ86X10 1494 aa9.91□□□□□ -0.82
MTHFD1-215ENST00000557370 SENP3-EIF4A1A0A087X0R7 540 aa9.9□□□□□ -0.82
MTHFD1-215ENST00000557370 HIRIP3Q9BW71 556 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-215ENST00000557370 STAG3Q9UJ98 1225 aa9.9□□□□□ -0.82
MTHFD1-215ENST00000557370 ABCC3O15438 1527 aa9.9□□□□□ -0.82
MTHFD1-215ENST00000557370 NKTRP30414 1462 aaKnown RBP9.9□□□□□ -0.83
MTHFD1-215ENST00000557370 UBR1Q8IWV7 1749 aa9.9□□□□□ -0.83
MTHFD1-215ENST00000557370 DHX29Q7Z478 1369 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-215ENST00000557370 NWD1Q149M9 1564 aa9.89□□□□□ -0.83
MTHFD1-215ENST00000557370 SF3B2Q13435 895 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-215ENST00000557370 SLC26A8Q96RN1 970 aa9.89□□□□□ -0.83
MTHFD1-215ENST00000557370 MAST1Q9Y2H9 1570 aa9.88□□□□□ -0.83
MTHFD1-215ENST00000557370 AHDC1Q5TGY3 1603 aaPredicted RBP9.88□□□□□ -0.83
MTHFD1-215ENST00000557370 ERVK-7P63135 1459 aa9.87□□□□□ -0.83
MTHFD1-215ENST00000557370 PPP4R2Q9NY27 417 aa9.87□□□□□ -0.83
MTHFD1-215ENST00000557370 U3KPZ7 1027 aaPredicted RBP9.87□□□□□ -0.83
MTHFD1-215ENST00000557370 SLIT1O75093 1534 aa9.87□□□□□ -0.83
MTHFD1-215ENST00000557370 KDM5AP29375 1690 aaKnown RBP9.87□□□□□ -0.83
MTHFD1-215ENST00000557370 KIF7Q2M1P5 1343 aa9.86□□□□□ -0.83
MTHFD1-215ENST00000557370 CCDC141Q6ZP82 1450 aa9.86□□□□□ -0.83
MTHFD1-215ENST00000557370 ARHGAP23Q9P227 1491 aa9.86□□□□□ -0.83
MTHFD1-215ENST00000557370 PSDA5PKW4 1024 aaPredicted RBP9.86□□□□□ -0.83
MTHFD1-215ENST00000557370 ATF3P18847 181 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms