RNA–Protein interactions for RNA: ENST00000557365.1

APEX1-219, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 831 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-219ENST00000557365 HDGFP51858 240 aaKnown RBP17.21■□□□□ 0.35
APEX1-219ENST00000557365 DCAF11Q8TEB1 546 aa17.21■□□□□ 0.35
APEX1-219ENST00000557365 STAG3Q9UJ98 1225 aa17.21■□□□□ 0.35
APEX1-219ENST00000557365 THEMISQ8N1K5 641 aaPredicted RBP17.2■□□□□ 0.34
APEX1-219ENST00000557365 NRXN1Q9ULB1 1477 aa17.19■□□□□ 0.34
APEX1-219ENST00000557365 VGFO15240 615 aaPredicted RBP17.19■□□□□ 0.34
APEX1-219ENST00000557365 ZNF326Q5BKZ1 582 aaKnown RBP17.19■□□□□ 0.34
APEX1-219ENST00000557365 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.19■□□□□ 0.34
APEX1-219ENST00000557365 SLIT1O75093 1534 aa17.19■□□□□ 0.34
APEX1-219ENST00000557365 ARHGAP23Q9P227 1491 aa17.18■□□□□ 0.34
APEX1-219ENST00000557365 TMEM2Q9UHN6 1383 aa17.17■□□□□ 0.34
APEX1-219ENST00000557365 PRAG1Q86YV5 1406 aa17.17■□□□□ 0.34
APEX1-219ENST00000557365 KIAA1210Q9ULL0 1709 aa17.16■□□□□ 0.34
APEX1-219ENST00000557365 RIMS2Q9UQ26 1411 aa17.16■□□□□ 0.34
APEX1-219ENST00000557365 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
APEX1-219ENST00000557365 KDM2AQ9Y2K7 1162 aa17.14■□□□□ 0.33
APEX1-219ENST00000557365 NBPF8Q3BBV2 869 aa17.13■□□□□ 0.33
APEX1-219ENST00000557365 PIK3C2GO75747 1445 aa17.12■□□□□ 0.33
APEX1-219ENST00000557365 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
APEX1-219ENST00000557365 LAMC1P11047 1609 aa17.11■□□□□ 0.33
APEX1-219ENST00000557365 TRPM1Q7Z4N2 1603 aa17.11■□□□□ 0.33
APEX1-219ENST00000557365 ADGRF5Q8IZF2 1346 aa17.11■□□□□ 0.33
APEX1-219ENST00000557365 EID1Q9Y6B2 187 aa17.1■□□□□ 0.33
APEX1-219ENST00000557365 GPRASP1Q5JY77 1395 aa17.09■□□□□ 0.33
APEX1-219ENST00000557365 SETBP1Q9Y6X0 1596 aa17.08■□□□□ 0.32
APEX1-219ENST00000557365 PLEKHG1Q9ULL1 1385 aa17.08■□□□□ 0.32
APEX1-219ENST00000557365 C14orf93Q9H972 538 aaKnown RBP17.08■□□□□ 0.32
APEX1-219ENST00000557365 SCAF11Q99590 1463 aaKnown RBP17.07■□□□□ 0.32
APEX1-219ENST00000557365 TXNDC2Q86VQ3 553 aa17.07■□□□□ 0.32
APEX1-219ENST00000557365 ANKLE2Q86XL3 938 aa17.06■□□□□ 0.32
APEX1-219ENST00000557365 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
APEX1-219ENST00000557365 LTKP29376 864 aa17.05■□□□□ 0.32
APEX1-219ENST00000557365 MED14O60244 1454 aa17.05■□□□□ 0.32
APEX1-219ENST00000557365 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
APEX1-219ENST00000557365 NRXN3Q9Y4C0 1643 aa17.03■□□□□ 0.32
APEX1-219ENST00000557365 ALKQ9UM73 1620 aa17.03■□□□□ 0.32
APEX1-219ENST00000557365 DIP2AQ14689 1571 aa17.02■□□□□ 0.32
APEX1-219ENST00000557365 SETD1AO15047 1707 aaKnown RBP17.02■□□□□ 0.32
APEX1-219ENST00000557365 CFAP70Q5T0N1 1121 aa17.02■□□□□ 0.32
APEX1-219ENST00000557365 ROCK2O75116 1388 aaKnown RBP17.02■□□□□ 0.31
APEX1-219ENST00000557365 NUTM2DQ5VT03 806 aaPredicted RBP17.01■□□□□ 0.31
APEX1-219ENST00000557365 ADGRB1O14514 1584 aa17.01■□□□□ 0.31
APEX1-219ENST00000557365 TBX22Q9Y458 520 aa17■□□□□ 0.31
APEX1-219ENST00000557365 IQGAP1P46940 1657 aa17■□□□□ 0.31
APEX1-219ENST00000557365 ADAMTS13Q76LX8 1427 aa16.99■□□□□ 0.31
APEX1-219ENST00000557365 NBPF1Q3BBV0 1214 aa16.99■□□□□ 0.31
APEX1-219ENST00000557365 CARD11Q9BXL7 1154 aa16.98■□□□□ 0.31
APEX1-219ENST00000557365 PIK3R4Q99570 1358 aa16.98■□□□□ 0.31
APEX1-219ENST00000557365 NPHP4O75161 1426 aaPredicted RBP16.96■□□□□ 0.31
APEX1-219ENST00000557365 EIF4G2P78344 907 aaKnown RBP eCLIP16.96■□□□□ 0.31
APEX1-219ENST00000557365 ASXL1Q8IXJ9 1541 aa16.95■□□□□ 0.3
APEX1-219ENST00000557365 STRCQ7RTU9 1775 aa16.94■□□□□ 0.3
APEX1-219ENST00000557365 LRPPRCP42704 1394 aaKnown RBP16.93■□□□□ 0.3
APEX1-219ENST00000557365 ABCC11Q96J66 1382 aa16.93■□□□□ 0.3
APEX1-219ENST00000557365 USP47Q96K76 1375 aa16.93■□□□□ 0.3
APEX1-219ENST00000557365 SIRT1Q96EB6 747 aa16.93■□□□□ 0.3
APEX1-219ENST00000557365 YTHDC2Q9H6S0 1430 aaKnown RBP16.93■□□□□ 0.3
APEX1-219ENST00000557365 EIF3AQ14152 1382 aaKnown RBP16.92■□□□□ 0.3
APEX1-219ENST00000557365 DLC1Q96QB1 1528 aa16.92■□□□□ 0.3
APEX1-219ENST00000557365 SLC24A1O60721 1099 aa16.92■□□□□ 0.3
APEX1-219ENST00000557365 BCANQ96GW7 911 aa16.92■□□□□ 0.3
APEX1-219ENST00000557365 TECPR2O15040 1411 aa16.92■□□□□ 0.3
APEX1-219ENST00000557365 KNDC1Q76NI1 1749 aa16.92■□□□□ 0.3
APEX1-219ENST00000557365 NCKAP5LQ9HCH0 1330 aa16.92■□□□□ 0.3
APEX1-219ENST00000557365 HSPA2P54652 639 aa16.91■□□□□ 0.3
APEX1-219ENST00000557365 METP08581 1390 aa16.9■□□□□ 0.3
APEX1-219ENST00000557365 TMEM132EQ6IEE7 984 aa16.9■□□□□ 0.3
APEX1-219ENST00000557365 CHD2O14647 1828 aaKnown RBP16.9■□□□□ 0.3
APEX1-219ENST00000557365 HSPA5P11021 654 aaKnown RBP16.89■□□□□ 0.29
APEX1-219ENST00000557365 SLC26A8Q96RN1 970 aa16.89■□□□□ 0.29
APEX1-219ENST00000557365 ARHGEF28Q8N1W1 1705 aaKnown RBP16.88■□□□□ 0.29
APEX1-219ENST00000557365 DMRT2Q9Y5R5 561 aa16.88■□□□□ 0.29
APEX1-219ENST00000557365 SBNO2Q9Y2G9 1366 aa16.88■□□□□ 0.29
APEX1-219ENST00000557365 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
APEX1-219ENST00000557365 CPS1P31327 1500 aa16.87■□□□□ 0.29
APEX1-219ENST00000557365 XRN1Q8IZH2 1706 aaKnown RBP16.87■□□□□ 0.29
APEX1-219ENST00000557365 ST20-MTHFSA0A0A6YYL1 179 aa16.85■□□□□ 0.29
APEX1-219ENST00000557365 ZNF316A6NFI3 1004 aaPredicted RBP16.85■□□□□ 0.29
APEX1-219ENST00000557365 PTCH1Q13635 1447 aa16.85■□□□□ 0.29
APEX1-219ENST00000557365 PTPRUQ92729 1446 aa16.85■□□□□ 0.29
APEX1-219ENST00000557365 TRAK1Q9UPV9 953 aa16.84■□□□□ 0.29
APEX1-219ENST00000557365 NWD1Q149M9 1564 aa16.84■□□□□ 0.29
APEX1-219ENST00000557365 KCNA6P17658 529 aa16.83■□□□□ 0.28
APEX1-219ENST00000557365 TESK2Q96S53 571 aa16.83■□□□□ 0.28
APEX1-219ENST00000557365 CENPJQ9HC77 1338 aaPredicted RBP16.83■□□□□ 0.28
APEX1-219ENST00000557365 AMOTL2Q9Y2J4 779 aa16.83■□□□□ 0.28
APEX1-219ENST00000557365 SENP3Q9H4L4 574 aaPredicted RBP16.81■□□□□ 0.28
APEX1-219ENST00000557365 STK26Q9P289 416 aa16.81■□□□□ 0.28
APEX1-219ENST00000557365 QRICH2Q9H0J4 1663 aa16.81■□□□□ 0.28
APEX1-219ENST00000557365 PUS7Q96PZ0 661 aaKnown RBP16.79■□□□□ 0.28
APEX1-219ENST00000557365 NKTRP30414 1462 aaKnown RBP16.79■□□□□ 0.28
APEX1-219ENST00000557365 ROBO2Q9HCK4 1378 aa16.78■□□□□ 0.28
APEX1-219ENST00000557365 PRAM1Q96QH2 718 aa16.78■□□□□ 0.28
APEX1-219ENST00000557365 POGKQ9P215 609 aa16.78■□□□□ 0.28
APEX1-219ENST00000557365 TMF1P82094 1093 aa16.77■□□□□ 0.28
APEX1-219ENST00000557365 CDCA8Q53HL2 280 aa16.77■□□□□ 0.28
APEX1-219ENST00000557365 NCOA3Q9Y6Q9 1424 aa16.76■□□□□ 0.27
APEX1-219ENST00000557365 HIRIP3Q9BW71 556 aaPredicted RBP16.75■□□□□ 0.27
APEX1-219ENST00000557365 ADGRB2O60241 1585 aa16.75■□□□□ 0.27
APEX1-219ENST00000557365 STRCP1A6NGW2 1772 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms