RNA–Protein interactions for RNA: ENST00000557295.1

LINC00640-204, long intergenic non-protein coding RNA 640, humanhuman

TSL 5 BASIC

Gene LINC00640, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-204ENST00000557295 SAMD9Q5K651 1589 aa11.45□□□□□ -0.58
LINC00640-204ENST00000557295 ATP10AO60312 1499 aa11.45□□□□□ -0.58
LINC00640-204ENST00000557295 POTEMA6NI47 508 aa11.45□□□□□ -0.58
LINC00640-204ENST00000557295 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
LINC00640-204ENST00000557295 CFAP74Q9C0B2 1584 aa11.45□□□□□ -0.58
LINC00640-204ENST00000557295 IQSEC2Q5JU85 1478 aa11.44□□□□□ -0.58
LINC00640-204ENST00000557295 C9orf84Q5VXU9 1444 aa11.44□□□□□ -0.58
LINC00640-204ENST00000557295 SCAPERQ9BY12 1400 aa11.44□□□□□ -0.58
LINC00640-204ENST00000557295 LCE2DQ5TA82 110 aaPredicted RBP11.44□□□□□ -0.58
LINC00640-204ENST00000557295 DPY19L2Q6NUT2 758 aa11.44□□□□□ -0.58
LINC00640-204ENST00000557295 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.44□□□□□ -0.58
LINC00640-204ENST00000557295 SIGLEC1Q9BZZ2 1709 aa11.43□□□□□ -0.58
LINC00640-204ENST00000557295 HECW1Q76N89 1606 aa11.43□□□□□ -0.58
LINC00640-204ENST00000557295 PLCH2O75038 1416 aa11.43□□□□□ -0.58
LINC00640-204ENST00000557295 MFSD10Q14728 455 aa11.42□□□□□ -0.58
LINC00640-204ENST00000557295 POTEGQ6S5H5 508 aa11.42□□□□□ -0.58
LINC00640-204ENST00000557295 C3orf67Q6ZVT6 689 aa11.42□□□□□ -0.58
LINC00640-204ENST00000557295 PREX1Q8TCU6 1659 aa11.41□□□□□ -0.58
LINC00640-204ENST00000557295 SMYD5Q6GMV2 418 aa11.41□□□□□ -0.58
LINC00640-204ENST00000557295 MICALL2Q8IY33 904 aa11.41□□□□□ -0.58
LINC00640-204ENST00000557295 GPHNQ9NQX3 736 aaPredicted RBP11.41□□□□□ -0.58
LINC00640-204ENST00000557295 LTBP4Q8N2S1 1624 aa11.41□□□□□ -0.58
LINC00640-204ENST00000557295 PPP1R15BQ5SWA1 713 aa11.4□□□□□ -0.58
LINC00640-204ENST00000557295 LMOD2Q6P5Q4 547 aa11.4□□□□□ -0.58
LINC00640-204ENST00000557295 BOLA1Q9Y3E2 137 aa11.4□□□□□ -0.58
LINC00640-204ENST00000557295 EFCAB2Q5VUJ9 269 aa11.39□□□□□ -0.59
LINC00640-204ENST00000557295 FER1L4A9Z1Z3 1794 aa11.38□□□□□ -0.59
LINC00640-204ENST00000557295 STRCQ7RTU9 1775 aa11.38□□□□□ -0.59
LINC00640-204ENST00000557295 NCOA1Q15788 1441 aa11.37□□□□□ -0.59
LINC00640-204ENST00000557295 TRAPPC8Q9Y2L5 1435 aa11.37□□□□□ -0.59
LINC00640-204ENST00000557295 SEMA3EO15041 775 aa11.37□□□□□ -0.59
LINC00640-204ENST00000557295 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.36□□□□□ -0.59
LINC00640-204ENST00000557295 ZNF518AQ6AHZ1 1483 aa11.35□□□□□ -0.59
LINC00640-204ENST00000557295 AFAP1Q8N556 730 aa11.34□□□□□ -0.59
LINC00640-204ENST00000557295 UBAP1LF5GYI3 381 aa11.33□□□□□ -0.6
LINC00640-204ENST00000557295 REREQ9P2R6 1566 aa11.33□□□□□ -0.6
LINC00640-204ENST00000557295 SNPHO15079 494 aa11.32□□□□□ -0.6
LINC00640-204ENST00000557295 ST18O60284 1047 aa11.32□□□□□ -0.6
LINC00640-204ENST00000557295 RANGAP1P46060 587 aaPredicted RBP11.32□□□□□ -0.6
LINC00640-204ENST00000557295 ESF1Q9H501 851 aaKnown RBP11.32□□□□□ -0.6
LINC00640-204ENST00000557295 CAMK2BQ13554 666 aa11.31□□□□□ -0.6
LINC00640-204ENST00000557295 DSG2Q14126 1118 aa11.31□□□□□ -0.6
LINC00640-204ENST00000557295 CNTLNQ9NXG0 1405 aa11.31□□□□□ -0.6
LINC00640-204ENST00000557295 KDM5CP41229 1560 aa11.31□□□□□ -0.6
LINC00640-204ENST00000557295 MLH3Q9UHC1 1453 aa11.31□□□□□ -0.6
LINC00640-204ENST00000557295 AGLP35573 1532 aa11.3□□□□□ -0.6
LINC00640-204ENST00000557295 CDK13Q14004 1512 aaKnown RBP11.3□□□□□ -0.6
LINC00640-204ENST00000557295 NPATQ14207 1427 aa11.3□□□□□ -0.6
LINC00640-204ENST00000557295 TESPA1A2RU30 521 aaPredicted RBP11.3□□□□□ -0.6
LINC00640-204ENST00000557295 ZNF335Q9H4Z2 1342 aaPredicted RBP11.3□□□□□ -0.6
LINC00640-204ENST00000557295 TMEM121BQ9BXQ6 578 aaPredicted RBP11.29□□□□□ -0.6
LINC00640-204ENST00000557295 CDK11AQ9UQ88 783 aaPredicted RBP11.29□□□□□ -0.6
LINC00640-204ENST00000557295 FOXK1P85037 733 aa11.28□□□□□ -0.6
LINC00640-204ENST00000557295 PLPP6Q8IY26 295 aa11.28□□□□□ -0.6
LINC00640-204ENST00000557295 MYT1LQ9UL68 1186 aa11.28□□□□□ -0.6
LINC00640-204ENST00000557295 ARIH1Q9Y4X5 557 aaPredicted RBP11.28□□□□□ -0.6
LINC00640-204ENST00000557295 DIP2CQ9Y2E4 1556 aa11.28□□□□□ -0.6
LINC00640-204ENST00000557295 C2orf72A6NCS6 295 aa11.26□□□□□ -0.61
LINC00640-204ENST00000557295 DPYSL4O14531 572 aa11.26□□□□□ -0.61
LINC00640-204ENST00000557295 MAP3K9P80192 1104 aa11.26□□□□□ -0.61
LINC00640-204ENST00000557295 PCDH10Q9P2E7 1040 aa11.26□□□□□ -0.61
LINC00640-204ENST00000557295 CAMSAP1Q5T5Y3 1602 aa11.25□□□□□ -0.61
LINC00640-204ENST00000557295 TROQ12816 1431 aaPredicted RBP11.25□□□□□ -0.61
LINC00640-204ENST00000557295 EEA1Q15075 1411 aa11.25□□□□□ -0.61
LINC00640-204ENST00000557295 PLA2R1Q13018 1463 aa11.25□□□□□ -0.61
LINC00640-204ENST00000557295 ARHGAP5Q13017 1502 aa11.25□□□□□ -0.61
LINC00640-204ENST00000557295 SPDYE16A6NNV3 312 aaPredicted RBP11.24□□□□□ -0.61
LINC00640-204ENST00000557295 HSPA1LP34931 641 aa11.24□□□□□ -0.61
LINC00640-204ENST00000557295 ZMYM3Q14202 1370 aa11.24□□□□□ -0.61
LINC00640-204ENST00000557295 C3P01024 1663 aa11.24□□□□□ -0.61
LINC00640-204ENST00000557295 FMN1Q68DA7 1419 aa11.23□□□□□ -0.61
LINC00640-204ENST00000557295 TCOF1Q13428 1488 aaKnown RBP11.23□□□□□ -0.61
LINC00640-204ENST00000557295 SETD1BQ9UPS6 1966 aaKnown RBP11.23□□□□□ -0.61
LINC00640-204ENST00000557295 CLIP1P30622 1438 aa11.22□□□□□ -0.61
LINC00640-204ENST00000557295 ABCA6Q8N139 1617 aa11.21□□□□□ -0.61
LINC00640-204ENST00000557295 ATP1B4Q9UN42 357 aaPredicted RBP11.21□□□□□ -0.61
LINC00640-204ENST00000557295 MED1Q15648 1581 aaPredicted RBP11.2□□□□□ -0.62
LINC00640-204ENST00000557295 TOM1O60784 492 aa11.2□□□□□ -0.62
LINC00640-204ENST00000557295 ZC3H15Q8WU90 426 aaKnown RBP11.2□□□□□ -0.62
LINC00640-204ENST00000557295 EMILIN3Q9NT22 766 aa11.2□□□□□ -0.62
LINC00640-204ENST00000557295 KIF14Q15058 1648 aa11.2□□□□□ -0.62
LINC00640-204ENST00000557295 UPF1Q92900 1129 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC00640-204ENST00000557295 PLSCR2Q9NRY7 297 aa11.19□□□□□ -0.62
LINC00640-204ENST00000557295 MYO5CQ9NQX4 1742 aa11.18□□□□□ -0.62
LINC00640-204ENST00000557295 TBC1D12O60347 775 aa11.18□□□□□ -0.62
LINC00640-204ENST00000557295 PIP4K2BP78356 416 aa11.18□□□□□ -0.62
LINC00640-204ENST00000557295 ABCC1P33527 1531 aa11.18□□□□□ -0.62
LINC00640-204ENST00000557295 PTPRKQ15262 1439 aa11.18□□□□□ -0.62
LINC00640-204ENST00000557295 ZNF316A6NFI3 1004 aaPredicted RBP11.17□□□□□ -0.62
LINC00640-204ENST00000557295 KIF3CO14782 793 aa11.16□□□□□ -0.62
LINC00640-204ENST00000557295 MLLT3P42568 568 aaPredicted RBP11.16□□□□□ -0.62
LINC00640-204ENST00000557295 PDIA6Q15084 440 aa11.16□□□□□ -0.62
LINC00640-204ENST00000557295 TMEM92Q6UXU6 159 aa11.15□□□□□ -0.62
LINC00640-204ENST00000557295 GPIHBP1Q8IV16 184 aa11.15□□□□□ -0.62
LINC00640-204ENST00000557295 CEP170BQ9Y4F5 1589 aaPredicted RBP11.15□□□□□ -0.62
LINC00640-204ENST00000557295 CPS1P31327 1500 aa11.14□□□□□ -0.63
LINC00640-204ENST00000557295 MROH2AA6NES4 1674 aa11.14□□□□□ -0.63
LINC00640-204ENST00000557295 SPAG9O60271 1321 aaKnown RBP11.14□□□□□ -0.63
LINC00640-204ENST00000557295 GRXCR2A6NFK2 248 aa11.14□□□□□ -0.63
LINC00640-204ENST00000557295 RBM26Q5T8P6 1007 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms