RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 CHIC2Q9UKJ5 165 aa19.85■□□□□ 0.77
PSEN1-221ENST00000557293 LRP6O75581 1613 aa19.84■□□□□ 0.77
PSEN1-221ENST00000557293 ZFYVE9O95405 1425 aa19.84■□□□□ 0.77
PSEN1-221ENST00000557293 COL16A1Q07092 1604 aaPredicted RBP19.84■□□□□ 0.77
PSEN1-221ENST00000557293 ADGRB3O60242 1522 aa19.83■□□□□ 0.77
PSEN1-221ENST00000557293 CHD2O14647 1828 aaKnown RBP19.82■□□□□ 0.76
PSEN1-221ENST00000557293 BCANQ96GW7 911 aa19.82■□□□□ 0.76
PSEN1-221ENST00000557293 PTPN23Q9H3S7 1636 aa19.82■□□□□ 0.76
PSEN1-221ENST00000557293 PLEKHG1Q9ULL1 1385 aa19.82■□□□□ 0.76
PSEN1-221ENST00000557293 TBX22Q9Y458 520 aa19.81■□□□□ 0.76
PSEN1-221ENST00000557293 ANKRD30AQ9BXX3 1397 aa19.8■□□□□ 0.76
PSEN1-221ENST00000557293 SPATA31A6Q5VVP1 1343 aa19.79■□□□□ 0.76
PSEN1-221ENST00000557293 NCOA3Q9Y6Q9 1424 aa19.79■□□□□ 0.76
PSEN1-221ENST00000557293 FGD6Q6ZV73 1430 aa19.78■□□□□ 0.76
PSEN1-221ENST00000557293 RIMS2Q9UQ26 1411 aa19.77■□□□□ 0.76
PSEN1-221ENST00000557293 ZNF772Q68DY9 489 aaPredicted RBP19.77■□□□□ 0.76
PSEN1-221ENST00000557293 TRIM52Q96A61 297 aa19.77■□□□□ 0.76
PSEN1-221ENST00000557293 ADAMTS13Q76LX8 1427 aa19.75■□□□□ 0.75
PSEN1-221ENST00000557293 C19orf44Q9H6X5 657 aa19.74■□□□□ 0.75
PSEN1-221ENST00000557293 MYO5BQ9ULV0 1848 aa19.74■□□□□ 0.75
PSEN1-221ENST00000557293 HDGFP51858 240 aaKnown RBP19.73■□□□□ 0.75
PSEN1-221ENST00000557293 RPRD2Q5VT52 1461 aaKnown RBP19.73■□□□□ 0.75
PSEN1-221ENST00000557293 AHDC1Q5TGY3 1603 aaPredicted RBP19.73■□□□□ 0.75
PSEN1-221ENST00000557293 MEX3CQ5U5Q3 659 aaKnown RBP19.72■□□□□ 0.75
PSEN1-221ENST00000557293 TMEM131LA2VDJ0 1609 aa19.72■□□□□ 0.75
PSEN1-221ENST00000557293 PPP1R15AO75807 674 aaPredicted RBP19.71■□□□□ 0.75
PSEN1-221ENST00000557293 RXRBP28702 533 aa19.71■□□□□ 0.75
PSEN1-221ENST00000557293 CADPS2Q86UW7 1296 aa19.71■□□□□ 0.75
PSEN1-221ENST00000557293 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.71■□□□□ 0.75
PSEN1-221ENST00000557293 NUTM2DQ5VT03 806 aaPredicted RBP19.7■□□□□ 0.74
PSEN1-221ENST00000557293 BRINP3Q76B58 766 aa19.7■□□□□ 0.74
PSEN1-221ENST00000557293 ADGRL2O95490 1459 aa19.7■□□□□ 0.74
PSEN1-221ENST00000557293 SHPRHQ149N8 1683 aa19.69■□□□□ 0.74
PSEN1-221ENST00000557293 C14orf37Q86TY3 774 aa19.69■□□□□ 0.74
PSEN1-221ENST00000557293 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.69■□□□□ 0.74
PSEN1-221ENST00000557293 ATF3P18847 181 aa19.68■□□□□ 0.74
PSEN1-221ENST00000557293 DIP2AQ14689 1571 aa19.68■□□□□ 0.74
PSEN1-221ENST00000557293 GCC2Q8IWJ2 1684 aa19.68■□□□□ 0.74
PSEN1-221ENST00000557293 PTPRUQ92729 1446 aa19.68■□□□□ 0.74
PSEN1-221ENST00000557293 PIK3R4Q99570 1358 aa19.67■□□□□ 0.74
PSEN1-221ENST00000557293 NUTM2BA6NNL0 878 aaPredicted RBP19.66■□□□□ 0.74
PSEN1-221ENST00000557293 NUTM2EB1AL46 878 aaPredicted RBP19.66■□□□□ 0.74
PSEN1-221ENST00000557293 NUTM2AQ8IVF1 878 aaPredicted RBP19.66■□□□□ 0.74
PSEN1-221ENST00000557293 AMOTL2Q9Y2J4 779 aa19.66■□□□□ 0.74
PSEN1-221ENST00000557293 ANKRD50Q9ULJ7 1429 aa19.66■□□□□ 0.74
PSEN1-221ENST00000557293 CDK12Q9NYV4 1490 aaPredicted RBP19.66■□□□□ 0.74
PSEN1-221ENST00000557293 CHGAP10645 457 aaKnown RBP19.65■□□□□ 0.74
PSEN1-221ENST00000557293 AFF2P51816 1311 aa19.64■□□□□ 0.73
PSEN1-221ENST00000557293 SETD5Q9C0A6 1442 aa19.61■□□□□ 0.73
PSEN1-221ENST00000557293 APLP2Q06481 763 aa19.61■□□□□ 0.73
PSEN1-221ENST00000557293 QTRT2Q9H974 415 aaKnown RBP19.58■□□□□ 0.72
PSEN1-221ENST00000557293 MST1RQ04912 1400 aa19.58■□□□□ 0.72
PSEN1-221ENST00000557293 FAM50AQ14320 339 aaKnown RBP19.57■□□□□ 0.72
PSEN1-221ENST00000557293 DDX17Q92841 729 aaKnown RBP19.57■□□□□ 0.72
PSEN1-221ENST00000557293 LRRC59Q96AG4 307 aaKnown RBP19.57■□□□□ 0.72
PSEN1-221ENST00000557293 DCCP43146 1447 aa19.57■□□□□ 0.72
PSEN1-221ENST00000557293 ASXL1Q8IXJ9 1541 aa19.56■□□□□ 0.72
PSEN1-221ENST00000557293 E9PCH4 1651 aa19.56■□□□□ 0.72
PSEN1-221ENST00000557293 RGS12O14924 1447 aa19.56■□□□□ 0.72
PSEN1-221ENST00000557293 TRPM2O94759 1503 aa19.56■□□□□ 0.72
PSEN1-221ENST00000557293 RBM6P78332 1123 aaKnown RBP19.55■□□□□ 0.72
PSEN1-221ENST00000557293 UNC13BO14795 1591 aa19.54■□□□□ 0.72
PSEN1-221ENST00000557293 PNPLA6Q8IY17 1366 aa19.54■□□□□ 0.72
PSEN1-221ENST00000557293 C8orf37Q96NL8 207 aa19.53■□□□□ 0.72
PSEN1-221ENST00000557293 NHSL1Q5SYE7 1610 aa19.53■□□□□ 0.72
PSEN1-221ENST00000557293 NRXN3Q9Y4C0 1643 aa19.52■□□□□ 0.72
PSEN1-221ENST00000557293 METP08581 1390 aa19.52■□□□□ 0.72
PSEN1-221ENST00000557293 XRN1Q8IZH2 1706 aaKnown RBP19.51■□□□□ 0.71
PSEN1-221ENST00000557293 SETBP1Q9Y6X0 1596 aa19.47■□□□□ 0.71
PSEN1-221ENST00000557293 IQGAP3Q86VI3 1631 aa19.47■□□□□ 0.71
PSEN1-221ENST00000557293 NGLY1Q96IV0 654 aa19.46■□□□□ 0.71
PSEN1-221ENST00000557293 NUP155O75694 1391 aa19.45■□□□□ 0.7
PSEN1-221ENST00000557293 ADGRL3Q9HAR2 1447 aa19.45■□□□□ 0.7
PSEN1-221ENST00000557293 ADAMTS2O95450 1211 aa19.45■□□□□ 0.7
PSEN1-221ENST00000557293 ROCK1Q13464 1354 aa19.44■□□□□ 0.7
PSEN1-221ENST00000557293 SOS2Q07890 1332 aaPredicted RBP19.43■□□□□ 0.7
PSEN1-221ENST00000557293 C1orf167Q5SNV9 1468 aa19.42■□□□□ 0.7
PSEN1-221ENST00000557293 ORAI2Q96SN7 254 aa19.42■□□□□ 0.7
PSEN1-221ENST00000557293 FNBP4Q8N3X1 1017 aaPredicted RBP19.41■□□□□ 0.7
PSEN1-221ENST00000557293 USP21Q9UK80 565 aa19.4■□□□□ 0.7
PSEN1-221ENST00000557293 LAMC1P11047 1609 aa19.4■□□□□ 0.7
PSEN1-221ENST00000557293 ZNF326Q5BKZ1 582 aaKnown RBP19.39■□□□□ 0.69
PSEN1-221ENST00000557293 ATAD2Q6PL18 1390 aa19.39■□□□□ 0.69
PSEN1-221ENST00000557293 NALCNQ8IZF0 1738 aa19.39■□□□□ 0.69
PSEN1-221ENST00000557293 TRPC5Q9UL62 973 aaPredicted RBP19.38■□□□□ 0.69
PSEN1-221ENST00000557293 ATRNO75882 1429 aa19.36■□□□□ 0.69
PSEN1-221ENST00000557293 SRCAPQ6ZRS2 3230 aa19.35■□□□□ 0.69
PSEN1-221ENST00000557293 ZRANB1Q9UGI0 708 aa19.35■□□□□ 0.69
PSEN1-221ENST00000557293 PTCH1Q13635 1447 aa19.34■□□□□ 0.69
PSEN1-221ENST00000557293 ROBO2Q9HCK4 1378 aa19.34■□□□□ 0.69
PSEN1-221ENST00000557293 NEXMIFQ5QGS0 1516 aa19.34■□□□□ 0.69
PSEN1-221ENST00000557293 SPHKAPQ2M3C7 1700 aa19.31■□□□□ 0.68
PSEN1-221ENST00000557293 BCL9LQ86UU0 1499 aa19.31■□□□□ 0.68
PSEN1-221ENST00000557293 CCDC125Q86Z20 511 aa19.3■□□□□ 0.68
PSEN1-221ENST00000557293 ITGAEP38570 1179 aa19.29■□□□□ 0.68
PSEN1-221ENST00000557293 CLTCL1P53675 1640 aa19.29■□□□□ 0.68
PSEN1-221ENST00000557293 MYOM2P54296 1465 aa19.28■□□□□ 0.68
PSEN1-221ENST00000557293 COL22A1Q8NFW1 1626 aaPredicted RBP19.28■□□□□ 0.68
PSEN1-221ENST00000557293 PRAG1Q86YV5 1406 aa19.26■□□□□ 0.67
PSEN1-221ENST00000557293 GJD4Q96KN9 370 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms