RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SENP3Q9H4L4 574 aaPredicted RBP24.26■■□□□ 1.47
TUBB3-213ENST00000557262 MED1Q15648 1581 aaPredicted RBP24.25■■□□□ 1.47
TUBB3-213ENST00000557262 GCC2Q8IWJ2 1684 aa24.25■■□□□ 1.47
TUBB3-213ENST00000557262 XIRP1Q702N8 1843 aaKnown RBP24.25■■□□□ 1.47
TUBB3-213ENST00000557262 TMEM94Q12767 1356 aa24.25■■□□□ 1.47
TUBB3-213ENST00000557262 PPP1R15AO75807 674 aaPredicted RBP24.24■■□□□ 1.47
TUBB3-213ENST00000557262 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.24■■□□□ 1.47
TUBB3-213ENST00000557262 ZFYVE9O95405 1425 aa24.24■■□□□ 1.47
TUBB3-213ENST00000557262 RIMS2Q9UQ26 1411 aa24.23■■□□□ 1.47
TUBB3-213ENST00000557262 PLEKHG1Q9ULL1 1385 aa24.22■■□□□ 1.47
TUBB3-213ENST00000557262 TMEM131LA2VDJ0 1609 aa24.21■■□□□ 1.47
TUBB3-213ENST00000557262 RBM33Q96EV2 1170 aaKnown RBP24.2■■□□□ 1.46
TUBB3-213ENST00000557262 TBX22Q9Y458 520 aa24.2■■□□□ 1.46
TUBB3-213ENST00000557262 E9PCH4 1651 aa24.2■■□□□ 1.46
TUBB3-213ENST00000557262 IQGAP3Q86VI3 1631 aa24.2■■□□□ 1.46
TUBB3-213ENST00000557262 MYO5BQ9ULV0 1848 aa24.19■■□□□ 1.46
TUBB3-213ENST00000557262 FAM135BQ49AJ0 1406 aa24.18■■□□□ 1.46
TUBB3-213ENST00000557262 NUTM2DQ5VT03 806 aaPredicted RBP24.16■■□□□ 1.46
TUBB3-213ENST00000557262 NKTRP30414 1462 aaKnown RBP24.15■■□□□ 1.46
TUBB3-213ENST00000557262 NWD1Q149M9 1564 aa24.14■■□□□ 1.45
TUBB3-213ENST00000557262 PHF23Q9BUL5 403 aaPredicted RBP24.14■■□□□ 1.45
TUBB3-213ENST00000557262 MSH6P52701 1360 aa24.11■■□□□ 1.45
TUBB3-213ENST00000557262 RRBP1Q9P2E9 1410 aaKnown RBP24.1■■□□□ 1.45
TUBB3-213ENST00000557262 SLAIN2Q9P270 581 aa24.09■■□□□ 1.45
TUBB3-213ENST00000557262 CHD2O14647 1828 aaKnown RBP24.09■■□□□ 1.45
TUBB3-213ENST00000557262 ADAMTS13Q76LX8 1427 aa24.08■■□□□ 1.44
TUBB3-213ENST00000557262 PIK3R4Q99570 1358 aa24.06■■□□□ 1.44
TUBB3-213ENST00000557262 NCOA3Q9Y6Q9 1424 aa24.05■■□□□ 1.44
TUBB3-213ENST00000557262 ROBO1Q9Y6N7 1651 aa24.04■■□□□ 1.44
TUBB3-213ENST00000557262 ZNF326Q5BKZ1 582 aaKnown RBP24.03■■□□□ 1.44
TUBB3-213ENST00000557262 C14orf37Q86TY3 774 aa24.03■■□□□ 1.44
TUBB3-213ENST00000557262 NAIPQ13075 1403 aa24.02■■□□□ 1.44
TUBB3-213ENST00000557262 AMOTL2Q9Y2J4 779 aa24.02■■□□□ 1.44
TUBB3-213ENST00000557262 DIP2AQ14689 1571 aa24.01■■□□□ 1.43
TUBB3-213ENST00000557262 C19orf44Q9H6X5 657 aa24.01■■□□□ 1.43
TUBB3-213ENST00000557262 SPHKAPQ2M3C7 1700 aa23.98■■□□□ 1.43
TUBB3-213ENST00000557262 TRIM52Q96A61 297 aa23.98■■□□□ 1.43
TUBB3-213ENST00000557262 CADPS2Q86UW7 1296 aa23.97■■□□□ 1.43
TUBB3-213ENST00000557262 TRPM2O94759 1503 aa23.96■■□□□ 1.43
TUBB3-213ENST00000557262 ATF3P18847 181 aa23.96■■□□□ 1.43
TUBB3-213ENST00000557262 RGS17Q9UGC6 210 aaPredicted RBP23.96■■□□□ 1.43
TUBB3-213ENST00000557262 PTPRUQ92729 1446 aa23.95■■□□□ 1.42
TUBB3-213ENST00000557262 HFM1A2PYH4 1435 aa23.93■■□□□ 1.42
TUBB3-213ENST00000557262 SETBP1Q9Y6X0 1596 aa23.91■■□□□ 1.42
TUBB3-213ENST00000557262 SLC4A1APQ9BWU0 796 aaKnown RBP23.9■■□□□ 1.42
TUBB3-213ENST00000557262 PHLPP1O60346 1717 aa23.9■■□□□ 1.42
TUBB3-213ENST00000557262 CLTCL1P53675 1640 aa23.89■■□□□ 1.42
TUBB3-213ENST00000557262 METP08581 1390 aa23.89■■□□□ 1.41
TUBB3-213ENST00000557262 JCADQ9P266 1359 aa23.89■■□□□ 1.41
TUBB3-213ENST00000557262 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.88■■□□□ 1.41
TUBB3-213ENST00000557262 NRXN3Q9Y4C0 1643 aa23.88■■□□□ 1.41
TUBB3-213ENST00000557262 VGFO15240 615 aaPredicted RBP23.87■■□□□ 1.41
TUBB3-213ENST00000557262 NEXMIFQ5QGS0 1516 aa23.84■■□□□ 1.41
TUBB3-213ENST00000557262 KIF1BO60333 1816 aa23.84■■□□□ 1.41
TUBB3-213ENST00000557262 RPGRIP1LQ68CZ1 1315 aa23.84■■□□□ 1.41
TUBB3-213ENST00000557262 POTEAQ6S8J7 498 aa23.83■■□□□ 1.41
TUBB3-213ENST00000557262 XRN1Q8IZH2 1706 aaKnown RBP23.82■■□□□ 1.4
TUBB3-213ENST00000557262 COL16A1Q07092 1604 aaPredicted RBP23.82■■□□□ 1.4
TUBB3-213ENST00000557262 BRINP3Q76B58 766 aa23.82■■□□□ 1.4
TUBB3-213ENST00000557262 DCCP43146 1447 aa23.82■■□□□ 1.4
TUBB3-213ENST00000557262 SPATA31A6Q5VVP1 1343 aa23.79■■□□□ 1.4
TUBB3-213ENST00000557262 AHDC1Q5TGY3 1603 aaPredicted RBP23.77■■□□□ 1.4
TUBB3-213ENST00000557262 FOXD1Q16676 465 aa23.77■■□□□ 1.4
TUBB3-213ENST00000557262 MST1RQ04912 1400 aa23.75■■□□□ 1.39
TUBB3-213ENST00000557262 MPHOSPH9Q99550 1183 aa23.74■■□□□ 1.39
TUBB3-213ENST00000557262 ADGRL3Q9HAR2 1447 aa23.74■■□□□ 1.39
TUBB3-213ENST00000557262 MEX3CQ5U5Q3 659 aaKnown RBP23.72■■□□□ 1.39
TUBB3-213ENST00000557262 LRRC59Q96AG4 307 aaKnown RBP23.7■■□□□ 1.38
TUBB3-213ENST00000557262 LRP6O75581 1613 aa23.7■■□□□ 1.38
TUBB3-213ENST00000557262 ASXL1Q8IXJ9 1541 aa23.69■■□□□ 1.38
TUBB3-213ENST00000557262 ROBO2Q9HCK4 1378 aa23.68■■□□□ 1.38
TUBB3-213ENST00000557262 ACIN1Q9UKV3 1341 aaKnown RBP23.68■■□□□ 1.38
TUBB3-213ENST00000557262 SHPRHQ149N8 1683 aa23.68■■□□□ 1.38
TUBB3-213ENST00000557262 RGL3Q3MIN7 710 aa23.68■■□□□ 1.38
TUBB3-213ENST00000557262 CCDC144AA2RUR9 1427 aa23.67■■□□□ 1.38
TUBB3-213ENST00000557262 PTCH1Q13635 1447 aa23.67■■□□□ 1.38
TUBB3-213ENST00000557262 ZNF772Q68DY9 489 aaPredicted RBP23.67■■□□□ 1.38
TUBB3-213ENST00000557262 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
TUBB3-213ENST00000557262 NUTM2BA6NNL0 878 aaPredicted RBP23.66■■□□□ 1.38
TUBB3-213ENST00000557262 NUTM2EB1AL46 878 aaPredicted RBP23.66■■□□□ 1.38
TUBB3-213ENST00000557262 NUTM2AQ8IVF1 878 aaPredicted RBP23.66■■□□□ 1.38
TUBB3-213ENST00000557262 NALCNQ8IZF0 1738 aa23.65■■□□□ 1.38
TUBB3-213ENST00000557262 DDX17Q92841 729 aaKnown RBP23.65■■□□□ 1.38
TUBB3-213ENST00000557262 PPLO60437 1756 aa23.65■■□□□ 1.38
TUBB3-213ENST00000557262 SETD1AO15047 1707 aaKnown RBP23.64■■□□□ 1.38
TUBB3-213ENST00000557262 ADGRF5Q8IZF2 1346 aa23.64■■□□□ 1.38
TUBB3-213ENST00000557262 PRAG1Q86YV5 1406 aa23.63■■□□□ 1.37
TUBB3-213ENST00000557262 NHSL1Q5SYE7 1610 aa23.62■■□□□ 1.37
TUBB3-213ENST00000557262 C1orf167Q5SNV9 1468 aa23.62■■□□□ 1.37
TUBB3-213ENST00000557262 ANKRD30BQ9BXX2 1392 aa23.62■■□□□ 1.37
TUBB3-213ENST00000557262 SPATA31E1Q6ZUB1 1445 aa23.61■■□□□ 1.37
TUBB3-213ENST00000557262 ORAI2Q96SN7 254 aa23.61■■□□□ 1.37
TUBB3-213ENST00000557262 STK26Q9P289 416 aa23.57■■□□□ 1.36
TUBB3-213ENST00000557262 PNPLA6Q8IY17 1366 aa23.55■■□□□ 1.36
TUBB3-213ENST00000557262 SOS2Q07890 1332 aaPredicted RBP23.55■■□□□ 1.36
TUBB3-213ENST00000557262 RXRBP28702 533 aa23.54■■□□□ 1.36
TUBB3-213ENST00000557262 TMEM132EQ6IEE7 984 aa23.54■■□□□ 1.36
TUBB3-213ENST00000557262 WAPLQ7Z5K2 1190 aa23.53■■□□□ 1.36
TUBB3-213ENST00000557262 AFF2P51816 1311 aa23.53■■□□□ 1.36
TUBB3-213ENST00000557262 LRPPRCP42704 1394 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms