RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SENP3Q9H4L4 574 aaPredicted RBP24.26■■□□□ 1.47
TUBB3-213ENST00000557262 MED1Q15648 1581 aaPredicted RBP24.25■■□□□ 1.47
TUBB3-213ENST00000557262 GCC2Q8IWJ2 1684 aa24.25■■□□□ 1.47
TUBB3-213ENST00000557262 XIRP1Q702N8 1843 aaKnown RBP24.25■■□□□ 1.47
TUBB3-213ENST00000557262 TMEM94Q12767 1356 aa24.25■■□□□ 1.47
TUBB3-213ENST00000557262 PPP1R15AO75807 674 aaPredicted RBP24.24■■□□□ 1.47
TUBB3-213ENST00000557262 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.24■■□□□ 1.47
TUBB3-213ENST00000557262 ZFYVE9O95405 1425 aa24.24■■□□□ 1.47
TUBB3-213ENST00000557262 RIMS2Q9UQ26 1411 aa24.23■■□□□ 1.47
TUBB3-213ENST00000557262 PLEKHG1Q9ULL1 1385 aa24.22■■□□□ 1.47
TUBB3-213ENST00000557262 TMEM131LA2VDJ0 1609 aa24.21■■□□□ 1.47
TUBB3-213ENST00000557262 RBM33Q96EV2 1170 aaKnown RBP24.2■■□□□ 1.46
TUBB3-213ENST00000557262 TBX22Q9Y458 520 aa24.2■■□□□ 1.46
TUBB3-213ENST00000557262 E9PCH4 1651 aa24.2■■□□□ 1.46
TUBB3-213ENST00000557262 IQGAP3Q86VI3 1631 aa24.2■■□□□ 1.46
TUBB3-213ENST00000557262 MYO5BQ9ULV0 1848 aa24.19■■□□□ 1.46
TUBB3-213ENST00000557262 FAM135BQ49AJ0 1406 aa24.18■■□□□ 1.46
TUBB3-213ENST00000557262 NUTM2DQ5VT03 806 aaPredicted RBP24.16■■□□□ 1.46
TUBB3-213ENST00000557262 NKTRP30414 1462 aaKnown RBP24.15■■□□□ 1.46
TUBB3-213ENST00000557262 NWD1Q149M9 1564 aa24.14■■□□□ 1.45
TUBB3-213ENST00000557262 PHF23Q9BUL5 403 aaPredicted RBP24.14■■□□□ 1.45
TUBB3-213ENST00000557262 MSH6P52701 1360 aa24.11■■□□□ 1.45
TUBB3-213ENST00000557262 RRBP1Q9P2E9 1410 aaKnown RBP24.1■■□□□ 1.45
TUBB3-213ENST00000557262 SLAIN2Q9P270 581 aa24.09■■□□□ 1.45
TUBB3-213ENST00000557262 CHD2O14647 1828 aaKnown RBP24.09■■□□□ 1.45
TUBB3-213ENST00000557262 ADAMTS13Q76LX8 1427 aa24.08■■□□□ 1.44
TUBB3-213ENST00000557262 PIK3R4Q99570 1358 aa24.06■■□□□ 1.44
TUBB3-213ENST00000557262 NCOA3Q9Y6Q9 1424 aa24.05■■□□□ 1.44
TUBB3-213ENST00000557262 ROBO1Q9Y6N7 1651 aa24.04■■□□□ 1.44
TUBB3-213ENST00000557262 ZNF326Q5BKZ1 582 aaKnown RBP24.03■■□□□ 1.44
TUBB3-213ENST00000557262 C14orf37Q86TY3 774 aa24.03■■□□□ 1.44
TUBB3-213ENST00000557262 NAIPQ13075 1403 aa24.02■■□□□ 1.44
TUBB3-213ENST00000557262 AMOTL2Q9Y2J4 779 aa24.02■■□□□ 1.44
TUBB3-213ENST00000557262 DIP2AQ14689 1571 aa24.01■■□□□ 1.43
TUBB3-213ENST00000557262 C19orf44Q9H6X5 657 aa24.01■■□□□ 1.43
TUBB3-213ENST00000557262 SPHKAPQ2M3C7 1700 aa23.98■■□□□ 1.43
TUBB3-213ENST00000557262 TRIM52Q96A61 297 aa23.98■■□□□ 1.43
TUBB3-213ENST00000557262 CADPS2Q86UW7 1296 aa23.97■■□□□ 1.43
TUBB3-213ENST00000557262 TRPM2O94759 1503 aa23.96■■□□□ 1.43
TUBB3-213ENST00000557262 ATF3P18847 181 aa23.96■■□□□ 1.43
TUBB3-213ENST00000557262 RGS17Q9UGC6 210 aaPredicted RBP23.96■■□□□ 1.43
TUBB3-213ENST00000557262 PTPRUQ92729 1446 aa23.95■■□□□ 1.42
TUBB3-213ENST00000557262 HFM1A2PYH4 1435 aa23.93■■□□□ 1.42
TUBB3-213ENST00000557262 SETBP1Q9Y6X0 1596 aa23.91■■□□□ 1.42
TUBB3-213ENST00000557262 SLC4A1APQ9BWU0 796 aaKnown RBP23.9■■□□□ 1.42
TUBB3-213ENST00000557262 PHLPP1O60346 1717 aa23.9■■□□□ 1.42
TUBB3-213ENST00000557262 CLTCL1P53675 1640 aa23.89■■□□□ 1.42
TUBB3-213ENST00000557262 METP08581 1390 aa23.89■■□□□ 1.41
TUBB3-213ENST00000557262 JCADQ9P266 1359 aa23.89■■□□□ 1.41
TUBB3-213ENST00000557262 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.88■■□□□ 1.41
TUBB3-213ENST00000557262 NRXN3Q9Y4C0 1643 aa23.88■■□□□ 1.41
TUBB3-213ENST00000557262 VGFO15240 615 aaPredicted RBP23.87■■□□□ 1.41
TUBB3-213ENST00000557262 NEXMIFQ5QGS0 1516 aa23.84■■□□□ 1.41
TUBB3-213ENST00000557262 KIF1BO60333 1816 aa23.84■■□□□ 1.41
TUBB3-213ENST00000557262 RPGRIP1LQ68CZ1 1315 aa23.84■■□□□ 1.41
TUBB3-213ENST00000557262 POTEAQ6S8J7 498 aa23.83■■□□□ 1.41
TUBB3-213ENST00000557262 XRN1Q8IZH2 1706 aaKnown RBP23.82■■□□□ 1.4
TUBB3-213ENST00000557262 COL16A1Q07092 1604 aaPredicted RBP23.82■■□□□ 1.4
TUBB3-213ENST00000557262 BRINP3Q76B58 766 aa23.82■■□□□ 1.4
TUBB3-213ENST00000557262 DCCP43146 1447 aa23.82■■□□□ 1.4
TUBB3-213ENST00000557262 SPATA31A6Q5VVP1 1343 aa23.79■■□□□ 1.4
TUBB3-213ENST00000557262 AHDC1Q5TGY3 1603 aaPredicted RBP23.77■■□□□ 1.4
TUBB3-213ENST00000557262 FOXD1Q16676 465 aa23.77■■□□□ 1.4
TUBB3-213ENST00000557262 MST1RQ04912 1400 aa23.75■■□□□ 1.39
TUBB3-213ENST00000557262 MPHOSPH9Q99550 1183 aa23.74■■□□□ 1.39
TUBB3-213ENST00000557262 ADGRL3Q9HAR2 1447 aa23.74■■□□□ 1.39
TUBB3-213ENST00000557262 MEX3CQ5U5Q3 659 aaKnown RBP23.72■■□□□ 1.39
TUBB3-213ENST00000557262 LRRC59Q96AG4 307 aaKnown RBP23.7■■□□□ 1.38
TUBB3-213ENST00000557262 LRP6O75581 1613 aa23.7■■□□□ 1.38
TUBB3-213ENST00000557262 ASXL1Q8IXJ9 1541 aa23.69■■□□□ 1.38
TUBB3-213ENST00000557262 ROBO2Q9HCK4 1378 aa23.68■■□□□ 1.38
TUBB3-213ENST00000557262 ACIN1Q9UKV3 1341 aaKnown RBP23.68■■□□□ 1.38
TUBB3-213ENST00000557262 SHPRHQ149N8 1683 aa23.68■■□□□ 1.38
TUBB3-213ENST00000557262 RGL3Q3MIN7 710 aa23.68■■□□□ 1.38
TUBB3-213ENST00000557262 CCDC144AA2RUR9 1427 aa23.67■■□□□ 1.38
TUBB3-213ENST00000557262 PTCH1Q13635 1447 aa23.67■■□□□ 1.38
TUBB3-213ENST00000557262 ZNF772Q68DY9 489 aaPredicted RBP23.67■■□□□ 1.38
TUBB3-213ENST00000557262 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
TUBB3-213ENST00000557262 NUTM2BA6NNL0 878 aaPredicted RBP23.66■■□□□ 1.38
TUBB3-213ENST00000557262 NUTM2EB1AL46 878 aaPredicted RBP23.66■■□□□ 1.38
TUBB3-213ENST00000557262 NUTM2AQ8IVF1 878 aaPredicted RBP23.66■■□□□ 1.38
TUBB3-213ENST00000557262 NALCNQ8IZF0 1738 aa23.65■■□□□ 1.38
TUBB3-213ENST00000557262 DDX17Q92841 729 aaKnown RBP23.65■■□□□ 1.38
TUBB3-213ENST00000557262 PPLO60437 1756 aa23.65■■□□□ 1.38
TUBB3-213ENST00000557262 SETD1AO15047 1707 aaKnown RBP23.64■■□□□ 1.38
TUBB3-213ENST00000557262 ADGRF5Q8IZF2 1346 aa23.64■■□□□ 1.38
TUBB3-213ENST00000557262 PRAG1Q86YV5 1406 aa23.63■■□□□ 1.37
TUBB3-213ENST00000557262 NHSL1Q5SYE7 1610 aa23.62■■□□□ 1.37
TUBB3-213ENST00000557262 C1orf167Q5SNV9 1468 aa23.62■■□□□ 1.37
TUBB3-213ENST00000557262 ANKRD30BQ9BXX2 1392 aa23.62■■□□□ 1.37
TUBB3-213ENST00000557262 SPATA31E1Q6ZUB1 1445 aa23.61■■□□□ 1.37
TUBB3-213ENST00000557262 ORAI2Q96SN7 254 aa23.61■■□□□ 1.37
TUBB3-213ENST00000557262 STK26Q9P289 416 aa23.57■■□□□ 1.36
TUBB3-213ENST00000557262 PNPLA6Q8IY17 1366 aa23.55■■□□□ 1.36
TUBB3-213ENST00000557262 SOS2Q07890 1332 aaPredicted RBP23.55■■□□□ 1.36
TUBB3-213ENST00000557262 RXRBP28702 533 aa23.54■■□□□ 1.36
TUBB3-213ENST00000557262 TMEM132EQ6IEE7 984 aa23.54■■□□□ 1.36
TUBB3-213ENST00000557262 WAPLQ7Z5K2 1190 aa23.53■■□□□ 1.36
TUBB3-213ENST00000557262 AFF2P51816 1311 aa23.53■■□□□ 1.36
TUBB3-213ENST00000557262 LRPPRCP42704 1394 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms