RNA–Protein interactions for RNA: ENST00000557157.5

HNRNPC-229, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-229ENST00000557157 ANP32EQ9BTT0 268 aa7.01□□□□□ -1.29
HNRNPC-229ENST00000557157 PCGF6Q9BYE7 350 aa7.01□□□□□ -1.29
HNRNPC-229ENST00000557157 DAXXQ9UER7 740 aaPredicted RBP7.01□□□□□ -1.29
HNRNPC-229ENST00000557157 A0A0G2JS52 829 aa7□□□□□ -1.29
HNRNPC-229ENST00000557157 LAPTM4BQ86VI4 370 aa7□□□□□ -1.29
HNRNPC-229ENST00000557157 EPAS1Q99814 870 aa7□□□□□ -1.29
HNRNPC-229ENST00000557157 ADAMTSL3P82987 1691 aa7□□□□□ -1.29
HNRNPC-229ENST00000557157 TDRD9Q8NDG6 1382 aaKnown RBP6.99□□□□□ -1.29
HNRNPC-229ENST00000557157 ONECUT3O60422 494 aaPredicted RBP6.99□□□□□ -1.29
HNRNPC-229ENST00000557157 LTBP4Q8N2S1 1624 aa6.98□□□□□ -1.29
HNRNPC-229ENST00000557157 NYAP1Q6ZVC0 841 aa6.98□□□□□ -1.29
HNRNPC-229ENST00000557157 SETD1AO15047 1707 aaKnown RBP6.98□□□□□ -1.29
HNRNPC-229ENST00000557157 HSPA1LP34931 641 aa6.97□□□□□ -1.29
HNRNPC-229ENST00000557157 CAMK2BQ13554 666 aa6.97□□□□□ -1.29
HNRNPC-229ENST00000557157 PROX2Q3B8N5 592 aa6.97□□□□□ -1.29
HNRNPC-229ENST00000557157 GTF3C3Q9Y5Q9 886 aa6.97□□□□□ -1.29
HNRNPC-229ENST00000557157 MROH2BQ7Z745 1585 aa6.96□□□□□ -1.29
HNRNPC-229ENST00000557157 COL9A1P20849 921 aa6.96□□□□□ -1.3
HNRNPC-229ENST00000557157 BBXQ8WY36 941 aaPredicted RBP6.96□□□□□ -1.3
HNRNPC-229ENST00000557157 ADCY10Q96PN6 1610 aa6.95□□□□□ -1.3
HNRNPC-229ENST00000557157 SOWAHBA6NEL2 793 aa6.95□□□□□ -1.3
HNRNPC-229ENST00000557157 ITGBL1O95965 494 aaPredicted RBP6.95□□□□□ -1.3
HNRNPC-229ENST00000557157 PAXIP1Q6ZW49 1069 aaPredicted RBP6.95□□□□□ -1.3
HNRNPC-229ENST00000557157 CADPS2Q86UW7 1296 aa6.95□□□□□ -1.3
HNRNPC-229ENST00000557157 RAD54L2Q9Y4B4 1467 aa6.94□□□□□ -1.3
HNRNPC-229ENST00000557157 C6orf132Q5T0Z8 1188 aa6.94□□□□□ -1.3
HNRNPC-229ENST00000557157 ZFRQ96KR1 1074 aaKnown RBP6.94□□□□□ -1.3
HNRNPC-229ENST00000557157 CFAP44Q96MT7 982 aa6.94□□□□□ -1.3
HNRNPC-229ENST00000557157 IRX2Q9BZI1 471 aaPredicted RBP6.94□□□□□ -1.3
HNRNPC-229ENST00000557157 KIAA1468Q9P260 1216 aa6.94□□□□□ -1.3
HNRNPC-229ENST00000557157 STRCQ7RTU9 1775 aa6.93□□□□□ -1.3
HNRNPC-229ENST00000557157 DPYSL4O14531 572 aa6.93□□□□□ -1.3
HNRNPC-229ENST00000557157 NEUROD1Q13562 356 aa6.93□□□□□ -1.3
HNRNPC-229ENST00000557157 MADDQ8WXG6 1647 aa6.93□□□□□ -1.3
HNRNPC-229ENST00000557157 MAGI1Q96QZ7 1491 aaPredicted RBP6.92□□□□□ -1.3
HNRNPC-229ENST00000557157 TRIM6-TRIM34B2RNG4 842 aa6.92□□□□□ -1.3
HNRNPC-229ENST00000557157 UBAP1LF5GYI3 381 aa6.92□□□□□ -1.3
HNRNPC-229ENST00000557157 BCAMP50895 628 aa6.92□□□□□ -1.3
HNRNPC-229ENST00000557157 FAM98CQ17RN3 349 aaKnown RBP6.92□□□□□ -1.3
HNRNPC-229ENST00000557157 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.92□□□□□ -1.3
HNRNPC-229ENST00000557157 IQSEC2Q5JU85 1478 aa6.92□□□□□ -1.3
HNRNPC-229ENST00000557157 SHROOM2Q13796 1616 aa6.91□□□□□ -1.3
HNRNPC-229ENST00000557157 POTEAQ6S8J7 498 aa6.91□□□□□ -1.3
HNRNPC-229ENST00000557157 RBM33Q96EV2 1170 aaKnown RBP6.9□□□□□ -1.3
HNRNPC-229ENST00000557157 SEPT9Q9UHD8 586 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-229ENST00000557157 KDM2AQ9Y2K7 1162 aa6.9□□□□□ -1.3
HNRNPC-229ENST00000557157 CLSPNQ9HAW4 1339 aa6.9□□□□□ -1.3
HNRNPC-229ENST00000557157 KCNC4Q03721 635 aa6.89□□□□□ -1.31
HNRNPC-229ENST00000557157 DDX12PQ92771 950 aa6.89□□□□□ -1.31
HNRNPC-229ENST00000557157 LRCH3Q96II8 777 aa6.89□□□□□ -1.31
HNRNPC-229ENST00000557157 PTPRTO14522 1441 aa6.89□□□□□ -1.31
HNRNPC-229ENST00000557157 POLA1P09884 1462 aaPredicted RBP6.88□□□□□ -1.31
HNRNPC-229ENST00000557157 SPDYE16A6NNV3 312 aaPredicted RBP6.88□□□□□ -1.31
HNRNPC-229ENST00000557157 EN1Q05925 392 aaPredicted RBP6.88□□□□□ -1.31
HNRNPC-229ENST00000557157 NBR1Q14596 966 aa6.88□□□□□ -1.31
HNRNPC-229ENST00000557157 PACS2Q86VP3 889 aa6.88□□□□□ -1.31
HNRNPC-229ENST00000557157 TSHZ2Q9NRE2 1034 aa6.88□□□□□ -1.31
HNRNPC-229ENST00000557157 WBP1LQ9NX94 342 aa6.88□□□□□ -1.31
HNRNPC-229ENST00000557157 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.88□□□□□ -1.31
HNRNPC-229ENST00000557157 TSR3Q9UJK0 312 aaKnown RBP6.88□□□□□ -1.31
HNRNPC-229ENST00000557157 MAP3K7O43318 606 aa6.87□□□□□ -1.31
HNRNPC-229ENST00000557157 TRIM26Q12899 539 aaPredicted RBP6.87□□□□□ -1.31
HNRNPC-229ENST00000557157 PDIA6Q15084 440 aa6.87□□□□□ -1.31
HNRNPC-229ENST00000557157 YEATS2Q9ULM3 1422 aa6.86□□□□□ -1.31
HNRNPC-229ENST00000557157 SPRYD3Q8NCJ5 442 aa6.86□□□□□ -1.31
HNRNPC-229ENST00000557157 RIMS1Q86UR5 1692 aaKnown RBP6.86□□□□□ -1.31
HNRNPC-229ENST00000557157 GLI2P10070 1586 aa6.86□□□□□ -1.31
HNRNPC-229ENST00000557157 EIF5BO60841 1220 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-229ENST00000557157 VSIG10Q8N0Z9 540 aa6.85□□□□□ -1.31
HNRNPC-229ENST00000557157 HPS5Q9UPZ3 1129 aa6.85□□□□□ -1.31
HNRNPC-229ENST00000557157 DNMBPQ6XZF7 1577 aa6.85□□□□□ -1.31
HNRNPC-229ENST00000557157 BCORL1Q5H9F3 1711 aa6.84□□□□□ -1.31
HNRNPC-229ENST00000557157 GRIN2BQ13224 1484 aa6.84□□□□□ -1.31
HNRNPC-229ENST00000557157 PRG4Q92954 1404 aaPredicted RBP6.84□□□□□ -1.32
HNRNPC-229ENST00000557157 PPP4CP60510 307 aa6.83□□□□□ -1.32
HNRNPC-229ENST00000557157 E2F4Q16254 413 aa6.82□□□□□ -1.32
HNRNPC-229ENST00000557157 TSR1Q2NL82 804 aaKnown RBP6.82□□□□□ -1.32
HNRNPC-229ENST00000557157 TSKSQ9UJT2 592 aa6.82□□□□□ -1.32
HNRNPC-229ENST00000557157 MAP3K4Q9Y6R4 1608 aa6.82□□□□□ -1.32
HNRNPC-229ENST00000557157 NUP160Q12769 1436 aa6.82□□□□□ -1.32
HNRNPC-229ENST00000557157 NBPF26B4DH59 902 aa6.81□□□□□ -1.32
HNRNPC-229ENST00000557157 PIP4K2BP78356 416 aa6.81□□□□□ -1.32
HNRNPC-229ENST00000557157 LAPTM4AQ15012 233 aa6.81□□□□□ -1.32
HNRNPC-229ENST00000557157 UBE2Q2Q8WVN8 375 aa6.81□□□□□ -1.32
HNRNPC-229ENST00000557157 CDCA7LQ96GN5 454 aa6.81□□□□□ -1.32
HNRNPC-229ENST00000557157 WDR70Q9NW82 654 aa6.81□□□□□ -1.32
HNRNPC-229ENST00000557157 ARIH1Q9Y4X5 557 aaPredicted RBP6.81□□□□□ -1.32
HNRNPC-229ENST00000557157 PRSS12P56730 875 aa6.8□□□□□ -1.32
HNRNPC-229ENST00000557157 Q6ZNB5 142 aa6.8□□□□□ -1.32
HNRNPC-229ENST00000557157 PRDM2Q13029 1718 aa6.79□□□□□ -1.32
HNRNPC-229ENST00000557157 SETBP1Q9Y6X0 1596 aa6.79□□□□□ -1.32
HNRNPC-229ENST00000557157 SOGA1O94964 1423 aa6.79□□□□□ -1.32
HNRNPC-229ENST00000557157 ASXL2Q76L83 1435 aa6.79□□□□□ -1.32
HNRNPC-229ENST00000557157 HDGFP51858 240 aaKnown RBP6.79□□□□□ -1.32
HNRNPC-229ENST00000557157 NECTIN2Q92692 538 aa6.79□□□□□ -1.32
HNRNPC-229ENST00000557157 GRIN2AQ12879 1464 aa6.79□□□□□ -1.32
HNRNPC-229ENST00000557157 RBM27Q9P2N5 1060 aaKnown RBP6.78□□□□□ -1.32
HNRNPC-229ENST00000557157 GRXCR2A6NFK2 248 aa6.77□□□□□ -1.33
HNRNPC-229ENST00000557157 SAMD7Q7Z3H4 446 aa6.77□□□□□ -1.33
HNRNPC-229ENST00000557157 TATDN2Q93075 761 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms