RNA–Protein interactions for RNA: ENST00000556925.5

NEMF-213, Transcript of nuclear export mediator factor, humanhuman

TSL 5

Gene NEMF, Length 3,699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-213ENST00000556925 PEG3Q9GZU2 1588 aa11.28□□□□□ -0.6
NEMF-213ENST00000556925 DHX16O60231 1041 aaKnown RBP11.28□□□□□ -0.6
NEMF-213ENST00000556925 RPS6KL1Q9Y6S9 549 aa11.28□□□□□ -0.6
NEMF-213ENST00000556925 SPDYE4A6NLX3 237 aa11.27□□□□□ -0.6
NEMF-213ENST00000556925 POLD1P28340 1107 aa11.27□□□□□ -0.6
NEMF-213ENST00000556925 MRVI1Q9Y6F6 885 aa11.27□□□□□ -0.6
NEMF-213ENST00000556925 SLFN14P0C7P3 912 aa11.27□□□□□ -0.61
NEMF-213ENST00000556925 ARHGEF1Q92888 912 aaKnown RBP11.27□□□□□ -0.61
NEMF-213ENST00000556925 C1QTNF12Q5T7M4 302 aa11.26□□□□□ -0.61
NEMF-213ENST00000556925 MFAP1P55081 439 aaKnown RBP11.26□□□□□ -0.61
NEMF-213ENST00000556925 RBM28Q9NW13 759 aaKnown RBP11.25□□□□□ -0.61
NEMF-213ENST00000556925 GUCY2CP25092 1073 aa11.25□□□□□ -0.61
NEMF-213ENST00000556925 SASS6Q6UVJ0 657 aa11.25□□□□□ -0.61
NEMF-213ENST00000556925 PIK3R5Q8WYR1 880 aa11.25□□□□□ -0.61
NEMF-213ENST00000556925 RSPH14Q9UHP6 348 aa11.25□□□□□ -0.61
NEMF-213ENST00000556925 TNNT1P13805 278 aa11.25□□□□□ -0.61
NEMF-213ENST00000556925 TDO2P48775 406 aa11.25□□□□□ -0.61
NEMF-213ENST00000556925 ICE2Q659A1 982 aa11.25□□□□□ -0.61
NEMF-213ENST00000556925 TNNT3P45378 269 aaPredicted RBP11.24□□□□□ -0.61
NEMF-213ENST00000556925 WRNQ14191 1432 aaPredicted RBP eCLIP11.24□□□□□ -0.61
NEMF-213ENST00000556925 MPHOSPH10O00566 681 aaKnown RBP11.24□□□□□ -0.61
NEMF-213ENST00000556925 CCT2P78371 535 aaKnown RBP11.24□□□□□ -0.61
NEMF-213ENST00000556925 TSPAN18Q96SJ8 248 aa11.24□□□□□ -0.61
NEMF-213ENST00000556925 CALCOCO1Q9P1Z2 691 aa11.24□□□□□ -0.61
NEMF-213ENST00000556925 RNF123Q5XPI4 1314 aa11.24□□□□□ -0.61
NEMF-213ENST00000556925 MSNP26038 577 aaKnown RBP11.23□□□□□ -0.61
NEMF-213ENST00000556925 TNPO1Q92973 898 aaKnown RBP11.23□□□□□ -0.61
NEMF-213ENST00000556925 GZF1Q9H116 711 aaPredicted RBP11.23□□□□□ -0.61
NEMF-213ENST00000556925 KIF1CO43896 1103 aaKnown RBP11.23□□□□□ -0.61
NEMF-213ENST00000556925 GABPB1Q06547 395 aaPredicted RBP11.23□□□□□ -0.61
NEMF-213ENST00000556925 EXOC8Q8IYI6 725 aa11.23□□□□□ -0.61
NEMF-213ENST00000556925 JARID2Q92833 1246 aaPredicted RBP11.23□□□□□ -0.61
NEMF-213ENST00000556925 TMX1Q9H3N1 280 aa11.23□□□□□ -0.61
NEMF-213ENST00000556925 SUFUQ9UMX1 484 aa11.23□□□□□ -0.61
NEMF-213ENST00000556925 MED4Q9NPJ6 270 aa11.23□□□□□ -0.61
NEMF-213ENST00000556925 BIRC2Q13490 618 aa11.22□□□□□ -0.61
NEMF-213ENST00000556925 PANK3Q9H999 370 aa11.22□□□□□ -0.61
NEMF-213ENST00000556925 KLHL33A6NCF5 533 aa11.22□□□□□ -0.61
NEMF-213ENST00000556925 HNRNPUL2Q1KMD3 747 aaKnown RBP11.22□□□□□ -0.61
NEMF-213ENST00000556925 BRMS1Q9HCU9 246 aa11.22□□□□□ -0.61
NEMF-213ENST00000556925 PPP1R9BQ96SB3 815 aa11.21□□□□□ -0.61
NEMF-213ENST00000556925 SCP2P22307 547 aa11.21□□□□□ -0.61
NEMF-213ENST00000556925 RBM5P52756 815 aaKnown RBP eCLIP11.21□□□□□ -0.61
NEMF-213ENST00000556925 FAM212AQ96EL1 285 aa11.21□□□□□ -0.61
NEMF-213ENST00000556925 NOL10Q9BSC4 688 aaKnown RBP11.21□□□□□ -0.61
NEMF-213ENST00000556925 IGF1RP08069 1367 aa11.21□□□□□ -0.62
NEMF-213ENST00000556925 COQ9O75208 318 aa11.21□□□□□ -0.62
NEMF-213ENST00000556925 SLC26A8Q96RN1 970 aa11.21□□□□□ -0.62
NEMF-213ENST00000556925 ISY1Q9ULR0 285 aaKnown RBP11.21□□□□□ -0.62
NEMF-213ENST00000556925 XPCQ01831 940 aaPredicted RBP11.2□□□□□ -0.62
NEMF-213ENST00000556925 TRERF1Q96PN7 1200 aa11.2□□□□□ -0.62
NEMF-213ENST00000556925 C11orf91Q3C1V1 193 aa11.2□□□□□ -0.62
NEMF-213ENST00000556925 PPP1R12AO14974 1030 aaPredicted RBP11.2□□□□□ -0.62
NEMF-213ENST00000556925 PHF23Q9BUL5 403 aaPredicted RBP11.2□□□□□ -0.62
NEMF-213ENST00000556925 CTR9Q6PD62 1173 aa11.19□□□□□ -0.62
NEMF-213ENST00000556925 DHX57Q6P158 1386 aaKnown RBP11.19□□□□□ -0.62
NEMF-213ENST00000556925 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.19□□□□□ -0.62
NEMF-213ENST00000556925 CFAP65Q6ZU64 1925 aaKnown RBP11.19□□□□□ -0.62
NEMF-213ENST00000556925 INHBEP58166 350 aa11.19□□□□□ -0.62
NEMF-213ENST00000556925 MYRIPQ8NFW9 859 aa11.19□□□□□ -0.62
NEMF-213ENST00000556925 NINLQ9Y2I6 1382 aa11.18□□□□□ -0.62
NEMF-213ENST00000556925 LRCH2Q5VUJ6 765 aa11.18□□□□□ -0.62
NEMF-213ENST00000556925 DDX46Q7L014 1031 aaKnown RBP11.18□□□□□ -0.62
NEMF-213ENST00000556925 TSC1Q92574 1164 aa11.18□□□□□ -0.62
NEMF-213ENST00000556925 CXorf56Q9H5V9 222 aa11.18□□□□□ -0.62
NEMF-213ENST00000556925 MYBPC2Q14324 1141 aa11.17□□□□□ -0.62
NEMF-213ENST00000556925 AKNAQ7Z591 1439 aa11.17□□□□□ -0.62
NEMF-213ENST00000556925 TOMM22Q9NS69 142 aa11.17□□□□□ -0.62
NEMF-213ENST00000556925 CCDC173Q0VFZ6 552 aa11.17□□□□□ -0.62
NEMF-213ENST00000556925 SWT1Q5T5J6 900 aaKnown RBP11.17□□□□□ -0.62
NEMF-213ENST00000556925 NUTM2GQ5VZR2 741 aa11.16□□□□□ -0.62
NEMF-213ENST00000556925 SPTY2D1Q68D10 685 aaPredicted RBP11.16□□□□□ -0.62
NEMF-213ENST00000556925 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.16□□□□□ -0.62
NEMF-213ENST00000556925 ATL2Q8NHH9 583 aa11.16□□□□□ -0.62
NEMF-213ENST00000556925 JMYQ8N9B5 988 aa11.16□□□□□ -0.62
NEMF-213ENST00000556925 RAD50Q92878 1312 aa11.16□□□□□ -0.62
NEMF-213ENST00000556925 PRDM2Q13029 1718 aa11.16□□□□□ -0.62
NEMF-213ENST00000556925 CSPP1Q1MSJ5 1256 aa11.16□□□□□ -0.62
NEMF-213ENST00000556925 MKL1Q969V6 931 aa11.16□□□□□ -0.62
NEMF-213ENST00000556925 U2AF2P26368 475 aaKnown RBP eCLIP11.15□□□□□ -0.623e-6■■■■□ 23.4
NEMF-213ENST00000556925 GTF2F1P35269 517 aaKnown RBP eCLIP11.15□□□□□ -0.62
NEMF-213ENST00000556925 FAM210AQ96ND0 272 aa11.15□□□□□ -0.62
NEMF-213ENST00000556925 NBPF3Q9H094 633 aa11.15□□□□□ -0.62
NEMF-213ENST00000556925 TERF2Q15554 542 aa11.15□□□□□ -0.62
NEMF-213ENST00000556925 MNS1Q8NEH6 495 aa11.15□□□□□ -0.62
NEMF-213ENST00000556925 NOL7Q9UMY1 257 aaKnown RBP11.15□□□□□ -0.62
NEMF-213ENST00000556925 GOLGA6CA6NDK9 693 aa11.15□□□□□ -0.62
NEMF-213ENST00000556925 GOLGA6BA6NDN3 693 aa11.15□□□□□ -0.62
NEMF-213ENST00000556925 GOLGA6DP0CG33 693 aa11.15□□□□□ -0.62
NEMF-213ENST00000556925 GYS2P54840 703 aa11.15□□□□□ -0.62
NEMF-213ENST00000556925 HDAC1Q13547 482 aaPredicted RBP11.15□□□□□ -0.62
NEMF-213ENST00000556925 BECN1Q14457 450 aa11.15□□□□□ -0.62
NEMF-213ENST00000556925 GOLGA6AQ9NYA3 693 aa11.15□□□□□ -0.62
NEMF-213ENST00000556925 RAD51AP2Q09MP3 1159 aa11.14□□□□□ -0.63
NEMF-213ENST00000556925 TSGA10IPQ3SY00 556 aa11.14□□□□□ -0.63
NEMF-213ENST00000556925 GAS2L3Q86XJ1 694 aa11.14□□□□□ -0.63
NEMF-213ENST00000556925 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.14□□□□□ -0.633e-8■■■■■ 63
NEMF-213ENST00000556925 KDM4CQ9H3R0 1056 aa11.14□□□□□ -0.63
NEMF-213ENST00000556925 PAX7P23759 505 aa11.14□□□□□ -0.63
NEMF-213ENST00000556925 ANTXR1Q9H6X2 564 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms