RNA–Protein interactions for RNA: ENST00000556925.5

NEMF-213, Transcript of nuclear export mediator factor, humanhuman

TSL 5

Gene NEMF, Length 3,699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-213ENST00000556925 PELP1Q8IZL8 1130 aaKnown RBP16.75■□□□□ 0.27
NEMF-213ENST00000556925 MYT1Q01538 1121 aa16.54■□□□□ 0.24
NEMF-213ENST00000556925 TTBK1Q5TCY1 1321 aaPredicted RBP16.03■□□□□ 0.16
NEMF-213ENST00000556925 PRKCSHP14314 528 aaPredicted RBP15.99■□□□□ 0.15
NEMF-213ENST00000556925 SLC24A1O60721 1099 aa15.79■□□□□ 0.12
NEMF-213ENST00000556925 APLP2Q06481 763 aa15.61■□□□□ 0.09
NEMF-213ENST00000556925 ERICH6Q7L0X2 663 aa15.44■□□□□ 0.06
NEMF-213ENST00000556925 BCL11AQ9H165 835 aa15.32■□□□□ 0.04
NEMF-213ENST00000556925 FAM9AQ8IZU1 332 aaPredicted RBP15.18■□□□□ 0.02
NEMF-213ENST00000556925 SCAF1Q9H7N4 1312 aaKnown RBP15.18■□□□□ 0.02
NEMF-213ENST00000556925 HRCP23327 699 aa15.15■□□□□ 0.02
NEMF-213ENST00000556925 DAXXQ9UER7 740 aaPredicted RBP15.02□□□□□ -0.01
NEMF-213ENST00000556925 PPARGC1BQ86YN6 1023 aaKnown RBP14.76□□□□□ -0.05
NEMF-213ENST00000556925 EIF5BO60841 1220 aaKnown RBP14.64□□□□□ -0.07
NEMF-213ENST00000556925 CENPBP07199 599 aaPredicted RBP14.55□□□□□ -0.08
NEMF-213ENST00000556925 PLEKHG5O94827 1062 aa14.48□□□□□ -0.09
NEMF-213ENST00000556925 ANP32EQ9BTT0 268 aa14.31□□□□□ -0.12
NEMF-213ENST00000556925 ACIN1Q9UKV3 1341 aaKnown RBP14.3□□□□□ -0.12
NEMF-213ENST00000556925 UBE2Q2Q8WVN8 375 aa14.26□□□□□ -0.13
NEMF-213ENST00000556925 GTF3C3Q9Y5Q9 886 aa14.24□□□□□ -0.13
NEMF-213ENST00000556925 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
NEMF-213ENST00000556925 ANO8Q9HCE9 1232 aaPredicted RBP14.23□□□□□ -0.13
NEMF-213ENST00000556925 NEUROD1Q13562 356 aa14.2□□□□□ -0.14
NEMF-213ENST00000556925 PODXL2Q9NZ53 605 aa14.09□□□□□ -0.15
NEMF-213ENST00000556925 PCGF6Q9BYE7 350 aa14.04□□□□□ -0.16
NEMF-213ENST00000556925 PKNOX2Q96KN3 472 aa13.92□□□□□ -0.18
NEMF-213ENST00000556925 NCBP3Q53F19 620 aaKnown RBP13.9□□□□□ -0.18
NEMF-213ENST00000556925 SALL2Q9Y467 1007 aaPredicted RBP13.83□□□□□ -0.2
NEMF-213ENST00000556925 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
NEMF-213ENST00000556925 ZEB1P37275 1124 aaPredicted RBP13.77□□□□□ -0.21
NEMF-213ENST00000556925 CCDC136Q96JN2 1154 aa13.77□□□□□ -0.21
NEMF-213ENST00000556925 AEBP2Q6ZN18 517 aaPredicted RBP13.72□□□□□ -0.21
NEMF-213ENST00000556925 ARXQ96QS3 562 aa13.63□□□□□ -0.23
NEMF-213ENST00000556925 PDIA4P13667 645 aaKnown RBP13.59□□□□□ -0.23
NEMF-213ENST00000556925 TSHZ2Q9NRE2 1034 aa13.59□□□□□ -0.23
NEMF-213ENST00000556925 TIMELESSQ9UNS1 1208 aa13.57□□□□□ -0.24
NEMF-213ENST00000556925 MYO15BQ96JP2 1530 aa13.57□□□□□ -0.24
NEMF-213ENST00000556925 PDE4CQ08493 712 aa13.55□□□□□ -0.24
NEMF-213ENST00000556925 PLPPR3Q6T4P5 718 aa13.55□□□□□ -0.24
NEMF-213ENST00000556925 RANGAP1P46060 587 aaPredicted RBP13.53□□□□□ -0.24
NEMF-213ENST00000556925 ERICH6BQ5W0A0 696 aa13.52□□□□□ -0.25
NEMF-213ENST00000556925 NEFLP07196 543 aa13.51□□□□□ -0.25
NEMF-213ENST00000556925 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.26
NEMF-213ENST00000556925 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.45□□□□□ -0.26
NEMF-213ENST00000556925 FGD1P98174 961 aa13.44□□□□□ -0.26
NEMF-213ENST00000556925 BCL11BQ9C0K0 894 aaPredicted RBP13.4□□□□□ -0.26
NEMF-213ENST00000556925 DEKP35659 375 aaKnown RBP13.32□□□□□ -0.28
NEMF-213ENST00000556925 A0A0U1RQG5 324 aaPredicted RBP13.29□□□□□ -0.28
NEMF-213ENST00000556925 AAMPQ13685 434 aa13.28□□□□□ -0.28
NEMF-213ENST00000556925 CCDC180Q9P1Z9 1646 aa13.28□□□□□ -0.28
NEMF-213ENST00000556925 ZMYND15Q9H091 742 aa13.26□□□□□ -0.29
NEMF-213ENST00000556925 MYT1LQ9UL68 1186 aa13.25□□□□□ -0.29
NEMF-213ENST00000556925 TRIM26Q12899 539 aaPredicted RBP13.22□□□□□ -0.29
NEMF-213ENST00000556925 TAF7LQ5H9L4 462 aa13.22□□□□□ -0.29
NEMF-213ENST00000556925 SUPT16HQ9Y5B9 1047 aaKnown RBP13.22□□□□□ -0.29
NEMF-213ENST00000556925 DIEXFQ68CQ4 756 aaKnown RBP13.22□□□□□ -0.29
NEMF-213ENST00000556925 MSH5O43196 834 aa13.21□□□□□ -0.29
NEMF-213ENST00000556925 RBM10P98175 930 aaKnown RBP13.2□□□□□ -0.3
NEMF-213ENST00000556925 TULP1O00294 542 aaPredicted RBP13.19□□□□□ -0.3
NEMF-213ENST00000556925 DCAF1Q9Y4B6 1507 aa13.18□□□□□ -0.3
NEMF-213ENST00000556925 IL27Q8NEV9 243 aa13.14□□□□□ -0.31
NEMF-213ENST00000556925 HOMEZQ8IX15 550 aa13.12□□□□□ -0.31
NEMF-213ENST00000556925 EHMT2Q96KQ7 1210 aa13.11□□□□□ -0.31
NEMF-213ENST00000556925 CLSPNQ9HAW4 1339 aa13.11□□□□□ -0.31
NEMF-213ENST00000556925 DHX37Q8IY37 1157 aaKnown RBP13.1□□□□□ -0.31
NEMF-213ENST00000556925 YTHDC1Q96MU7 727 aaKnown RBP13.1□□□□□ -0.31
NEMF-213ENST00000556925 RBM19Q9Y4C8 960 aaKnown RBP13.1□□□□□ -0.31
NEMF-213ENST00000556925 RSPH6AQ9H0K4 717 aa13.09□□□□□ -0.31
NEMF-213ENST00000556925 CHMP4AQ9BY43 222 aa13.08□□□□□ -0.32
NEMF-213ENST00000556925 VSIG10Q8N0Z9 540 aa13.06□□□□□ -0.32
NEMF-213ENST00000556925 GLIPR1L2Q4G1C9 344 aa13.03□□□□□ -0.32
NEMF-213ENST00000556925 PAXIP1Q6ZW49 1069 aaPredicted RBP13.01□□□□□ -0.33
NEMF-213ENST00000556925 LOC105371045A0A1W2PR82 267 aa12.99□□□□□ -0.33
NEMF-213ENST00000556925 SAMD1Q6SPF0 538 aaPredicted RBP12.98□□□□□ -0.33
NEMF-213ENST00000556925 BRD2P25440 801 aaKnown RBP12.95□□□□□ -0.34
NEMF-213ENST00000556925 RSPH4AQ5TD94 716 aa12.94□□□□□ -0.34
NEMF-213ENST00000556925 NPM2Q86SE8 214 aaKnown RBP12.93□□□□□ -0.34
NEMF-213ENST00000556925 HAP1P54257 671 aaPredicted RBP12.9□□□□□ -0.34
NEMF-213ENST00000556925 TRIM41Q8WV44 630 aa12.89□□□□□ -0.35
NEMF-213ENST00000556925 FANCIQ9NVI1 1328 aa12.88□□□□□ -0.35
NEMF-213ENST00000556925 C14orf37Q86TY3 774 aa12.8□□□□□ -0.36
NEMF-213ENST00000556925 NAP1L5Q96NT1 182 aaPredicted RBP12.79□□□□□ -0.36
NEMF-213ENST00000556925 NAP1L2Q9ULW6 460 aaPredicted RBP12.79□□□□□ -0.36
NEMF-213ENST00000556925 MIER1Q8N108 512 aa12.77□□□□□ -0.36
NEMF-213ENST00000556925 ZNF326Q5BKZ1 582 aaKnown RBP12.72□□□□□ -0.37
NEMF-213ENST00000556925 CHMP4BQ9H444 224 aaKnown RBP12.72□□□□□ -0.37
NEMF-213ENST00000556925 TAOK2Q9UL54 1235 aa12.72□□□□□ -0.37
NEMF-213ENST00000556925 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
NEMF-213ENST00000556925 CNKSR2Q8WXI2 1034 aa12.7□□□□□ -0.38
NEMF-213ENST00000556925 C11orf95C9JLR9 678 aaPredicted RBP12.69□□□□□ -0.38
NEMF-213ENST00000556925 IRX6P78412 446 aaPredicted RBP12.69□□□□□ -0.38
NEMF-213ENST00000556925 NBR1Q14596 966 aa12.67□□□□□ -0.38
NEMF-213ENST00000556925 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.67□□□□□ -0.38
NEMF-213ENST00000556925 BBXQ8WY36 941 aaPredicted RBP12.65□□□□□ -0.38
NEMF-213ENST00000556925 GTF2E1P29083 439 aaPredicted RBP12.64□□□□□ -0.39
NEMF-213ENST00000556925 IPO4Q8TEX9 1081 aaKnown RBP12.63□□□□□ -0.39
NEMF-213ENST00000556925 BCANQ96GW7 911 aa12.63□□□□□ -0.39
NEMF-213ENST00000556925 ZFP91Q96JP5 570 aaPredicted RBP12.63□□□□□ -0.39
NEMF-213ENST00000556925 CHIC1Q5VXU3 224 aa12.62□□□□□ -0.39
NEMF-213ENST00000556925 ZNF316A6NFI3 1004 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms