RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 HDGFP51858 240 aaKnown RBP25.55■■□□□ 1.68
PSEN1-218ENST00000556864 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.54■■□□□ 1.68
PSEN1-218ENST00000556864 MED14O60244 1454 aa25.53■■□□□ 1.68
PSEN1-218ENST00000556864 IQGAP1P46940 1657 aa25.53■■□□□ 1.68
PSEN1-218ENST00000556864 NPHP4O75161 1426 aaPredicted RBP25.53■■□□□ 1.68
PSEN1-218ENST00000556864 PPP1R15AO75807 674 aaPredicted RBP25.52■■□□□ 1.68
PSEN1-218ENST00000556864 TXNDC2Q86VQ3 553 aa25.51■■□□□ 1.67
PSEN1-218ENST00000556864 DMRT2Q9Y5R5 561 aa25.51■■□□□ 1.67
PSEN1-218ENST00000556864 RPGRIP1LQ68CZ1 1315 aa25.51■■□□□ 1.67
PSEN1-218ENST00000556864 NCKAP5LQ9HCH0 1330 aa25.51■■□□□ 1.67
PSEN1-218ENST00000556864 PPLO60437 1756 aa25.49■■□□□ 1.67
PSEN1-218ENST00000556864 IFT172Q9UG01 1749 aa25.49■■□□□ 1.67
PSEN1-218ENST00000556864 PLEKHG1Q9ULL1 1385 aa25.47■■□□□ 1.67
PSEN1-218ENST00000556864 LTKP29376 864 aa25.46■■□□□ 1.67
PSEN1-218ENST00000556864 DIP2AQ14689 1571 aa25.44■■□□□ 1.66
PSEN1-218ENST00000556864 CLSPNQ9HAW4 1339 aa25.44■■□□□ 1.66
PSEN1-218ENST00000556864 MYOM2P54296 1465 aa25.44■■□□□ 1.66
PSEN1-218ENST00000556864 RGL3Q3MIN7 710 aa25.43■■□□□ 1.66
PSEN1-218ENST00000556864 SETBP1Q9Y6X0 1596 aa25.42■■□□□ 1.66
PSEN1-218ENST00000556864 VGFO15240 615 aaPredicted RBP25.41■■□□□ 1.66
PSEN1-218ENST00000556864 NUTM2DQ5VT03 806 aaPredicted RBP25.38■■□□□ 1.65
PSEN1-218ENST00000556864 CCER1Q8TC90 406 aaPredicted RBP25.38■■□□□ 1.65
PSEN1-218ENST00000556864 BCANQ96GW7 911 aa25.38■■□□□ 1.65
PSEN1-218ENST00000556864 NRXN3Q9Y4C0 1643 aa25.35■■□□□ 1.65
PSEN1-218ENST00000556864 STAC3Q96MF2 364 aa25.35■■□□□ 1.65
PSEN1-218ENST00000556864 SIN3AQ96ST3 1273 aa25.35■■□□□ 1.65
PSEN1-218ENST00000556864 NEUROD1Q13562 356 aa25.34■■□□□ 1.65
PSEN1-218ENST00000556864 NRXN1Q9ULB1 1477 aa25.34■■□□□ 1.65
PSEN1-218ENST00000556864 LAMC1P11047 1609 aa25.34■■□□□ 1.65
PSEN1-218ENST00000556864 TONSLQ96HA7 1378 aa25.32■■□□□ 1.64
PSEN1-218ENST00000556864 PIK3C2GO75747 1445 aa25.32■■□□□ 1.64
PSEN1-218ENST00000556864 ADAMTS13Q76LX8 1427 aa25.32■■□□□ 1.64
PSEN1-218ENST00000556864 DCAF11Q8TEB1 546 aa25.29■■□□□ 1.64
PSEN1-218ENST00000556864 ADGRF5Q8IZF2 1346 aa25.29■■□□□ 1.64
PSEN1-218ENST00000556864 PIK3R4Q99570 1358 aa25.28■■□□□ 1.64
PSEN1-218ENST00000556864 ALKQ9UM73 1620 aa25.27■■□□□ 1.64
PSEN1-218ENST00000556864 SLC26A8Q96RN1 970 aa25.27■■□□□ 1.64
PSEN1-218ENST00000556864 TBX22Q9Y458 520 aa25.27■■□□□ 1.64
PSEN1-218ENST00000556864 NWD1Q149M9 1564 aa25.27■■□□□ 1.64
PSEN1-218ENST00000556864 SETD1AO15047 1707 aaKnown RBP25.26■■□□□ 1.63
PSEN1-218ENST00000556864 SENP3Q9H4L4 574 aaPredicted RBP25.25■■□□□ 1.63
PSEN1-218ENST00000556864 CPS1P31327 1500 aa25.24■■□□□ 1.63
PSEN1-218ENST00000556864 KDM2AQ9Y2K7 1162 aa25.23■■□□□ 1.63
PSEN1-218ENST00000556864 NKTRP30414 1462 aaKnown RBP25.22■■□□□ 1.63
PSEN1-218ENST00000556864 L3MBTL2Q969R5 705 aa25.22■■□□□ 1.63
PSEN1-218ENST00000556864 PRAG1Q86YV5 1406 aa25.21■■□□□ 1.63
PSEN1-218ENST00000556864 ZNF335Q9H4Z2 1342 aaPredicted RBP25.21■■□□□ 1.63
PSEN1-218ENST00000556864 KIAA1210Q9ULL0 1709 aa25.19■■□□□ 1.62
PSEN1-218ENST00000556864 LTBP4Q8N2S1 1624 aa25.19■■□□□ 1.62
PSEN1-218ENST00000556864 XRN1Q8IZH2 1706 aaKnown RBP25.18■■□□□ 1.62
PSEN1-218ENST00000556864 CHD2O14647 1828 aaKnown RBP25.17■■□□□ 1.62
PSEN1-218ENST00000556864 TIMELESSQ9UNS1 1208 aa25.17■■□□□ 1.62
PSEN1-218ENST00000556864 METP08581 1390 aa25.17■■□□□ 1.62
PSEN1-218ENST00000556864 ASXL1Q8IXJ9 1541 aa25.17■■□□□ 1.62
PSEN1-218ENST00000556864 KCNA6P17658 529 aa25.16■■□□□ 1.62
PSEN1-218ENST00000556864 STRCP1A6NGW2 1772 aa25.14■■□□□ 1.62
PSEN1-218ENST00000556864 C14orf93Q9H972 538 aaKnown RBP25.14■■□□□ 1.62
PSEN1-218ENST00000556864 PTPRUQ92729 1446 aa25.12■■□□□ 1.61
PSEN1-218ENST00000556864 KNDC1Q76NI1 1749 aa25.12■■□□□ 1.61
PSEN1-218ENST00000556864 ADGRB1O14514 1584 aa25.12■■□□□ 1.61
PSEN1-218ENST00000556864 CFAP70Q5T0N1 1121 aa25.11■■□□□ 1.61
PSEN1-218ENST00000556864 TRPM1Q7Z4N2 1603 aa25.11■■□□□ 1.61
PSEN1-218ENST00000556864 PTCH1Q13635 1447 aa25.11■■□□□ 1.61
PSEN1-218ENST00000556864 IQSEC2Q5JU85 1478 aa25.09■■□□□ 1.61
PSEN1-218ENST00000556864 LRPPRCP42704 1394 aaKnown RBP25.09■■□□□ 1.61
PSEN1-218ENST00000556864 LRRC7Q96NW7 1537 aa25.08■■□□□ 1.61
PSEN1-218ENST00000556864 TECPR2O15040 1411 aa25.08■■□□□ 1.61
PSEN1-218ENST00000556864 YTHDC2Q9H6S0 1430 aaKnown RBP25.08■■□□□ 1.61
PSEN1-218ENST00000556864 AMOTL2Q9Y2J4 779 aa25.07■■□□□ 1.6
PSEN1-218ENST00000556864 RALGAPBQ86X10 1494 aa25.06■■□□□ 1.6
PSEN1-218ENST00000556864 DLC1Q96QB1 1528 aa25.04■■□□□ 1.6
PSEN1-218ENST00000556864 ABCC11Q96J66 1382 aa25.03■■□□□ 1.6
PSEN1-218ENST00000556864 TMEM132EQ6IEE7 984 aa25.02■■□□□ 1.6
PSEN1-218ENST00000556864 PROSER2Q86WR7 435 aaPredicted RBP25.02■■□□□ 1.6
PSEN1-218ENST00000556864 NCOA3Q9Y6Q9 1424 aa25.02■■□□□ 1.6
PSEN1-218ENST00000556864 ROCK2O75116 1388 aaKnown RBP25.01■■□□□ 1.59
PSEN1-218ENST00000556864 TMEM94Q12767 1356 aa25.01■■□□□ 1.59
PSEN1-218ENST00000556864 CERKQ8TCT0 537 aa25■■□□□ 1.59
PSEN1-218ENST00000556864 FAM135BQ49AJ0 1406 aa24.99■■□□□ 1.59
PSEN1-218ENST00000556864 ROBO2Q9HCK4 1378 aa24.99■■□□□ 1.59
PSEN1-218ENST00000556864 STK26Q9P289 416 aa24.99■■□□□ 1.59
PSEN1-218ENST00000556864 GPRASP1Q5JY77 1395 aa24.97■■□□□ 1.59
PSEN1-218ENST00000556864 NBPF8Q3BBV2 869 aa24.97■■□□□ 1.59
PSEN1-218ENST00000556864 ARHGEF28Q8N1W1 1705 aaKnown RBP24.96■■□□□ 1.59
PSEN1-218ENST00000556864 XIRP1Q702N8 1843 aaKnown RBP24.96■■□□□ 1.59
PSEN1-218ENST00000556864 MSH6P52701 1360 aa24.94■■□□□ 1.58
PSEN1-218ENST00000556864 C14orf37Q86TY3 774 aa24.94■■□□□ 1.58
PSEN1-218ENST00000556864 SIRT1Q96EB6 747 aa24.94■■□□□ 1.58
PSEN1-218ENST00000556864 ADGRL3Q9HAR2 1447 aa24.94■■□□□ 1.58
PSEN1-218ENST00000556864 NALCNQ8IZF0 1738 aa24.93■■□□□ 1.58
PSEN1-218ENST00000556864 NBPF1Q3BBV0 1214 aa24.93■■□□□ 1.58
PSEN1-218ENST00000556864 EIF3AQ14152 1382 aaKnown RBP24.93■■□□□ 1.58
PSEN1-218ENST00000556864 DCCP43146 1447 aa24.92■■□□□ 1.58
PSEN1-218ENST00000556864 TRAK1Q9UPV9 953 aa24.91■■□□□ 1.58
PSEN1-218ENST00000556864 CDC42BPGQ6DT37 1551 aa24.89■■□□□ 1.58
PSEN1-218ENST00000556864 PRAM1Q96QH2 718 aa24.88■■□□□ 1.57
PSEN1-218ENST00000556864 CARD11Q9BXL7 1154 aa24.88■■□□□ 1.57
PSEN1-218ENST00000556864 POGKQ9P215 609 aa24.88■■□□□ 1.57
PSEN1-218ENST00000556864 RBM33Q96EV2 1170 aaKnown RBP24.87■■□□□ 1.57
PSEN1-218ENST00000556864 ADGRB2O60241 1585 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms