RNA–Protein interactions for RNA: ENST00000556863.1

CIPC-207, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 3

Gene CIPC, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-207ENST00000556863 TMEM2Q9UHN6 1383 aa20.79■□□□□ 0.92
CIPC-207ENST00000556863 CLSPNQ9HAW4 1339 aa20.78■□□□□ 0.92
CIPC-207ENST00000556863 ZFYVE9O95405 1425 aa20.78■□□□□ 0.92
CIPC-207ENST00000556863 STRCQ7RTU9 1775 aa20.77■□□□□ 0.92
CIPC-207ENST00000556863 NUTM2DQ5VT03 806 aaPredicted RBP20.77■□□□□ 0.92
CIPC-207ENST00000556863 SCAF11Q99590 1463 aaKnown RBP20.74■□□□□ 0.91
CIPC-207ENST00000556863 LTKP29376 864 aa20.73■□□□□ 0.91
CIPC-207ENST00000556863 NCKAP5LQ9HCH0 1330 aa20.73■□□□□ 0.91
CIPC-207ENST00000556863 SENP3Q9H4L4 574 aaPredicted RBP20.72■□□□□ 0.91
CIPC-207ENST00000556863 TXNDC2Q86VQ3 553 aa20.71■□□□□ 0.91
CIPC-207ENST00000556863 IQGAP1P46940 1657 aa20.7■□□□□ 0.91
CIPC-207ENST00000556863 RPGRIP1LQ68CZ1 1315 aa20.7■□□□□ 0.9
CIPC-207ENST00000556863 TONSLQ96HA7 1378 aa20.7■□□□□ 0.9
CIPC-207ENST00000556863 ANKLE2Q86XL3 938 aa20.69■□□□□ 0.9
CIPC-207ENST00000556863 L3MBTL2Q969R5 705 aa20.69■□□□□ 0.9
CIPC-207ENST00000556863 MYOM2P54296 1465 aa20.69■□□□□ 0.9
CIPC-207ENST00000556863 NRXN3Q9Y4C0 1643 aa20.68■□□□□ 0.9
CIPC-207ENST00000556863 PPP1R15AO75807 674 aaPredicted RBP20.68■□□□□ 0.9
CIPC-207ENST00000556863 DCAF11Q8TEB1 546 aa20.68■□□□□ 0.9
CIPC-207ENST00000556863 KDM2AQ9Y2K7 1162 aa20.68■□□□□ 0.9
CIPC-207ENST00000556863 EID1Q9Y6B2 187 aa20.68■□□□□ 0.9
CIPC-207ENST00000556863 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.67■□□□□ 0.9
CIPC-207ENST00000556863 ADGRF5Q8IZF2 1346 aa20.67■□□□□ 0.9
CIPC-207ENST00000556863 MED14O60244 1454 aa20.65■□□□□ 0.9
CIPC-207ENST00000556863 NPHP4O75161 1426 aaPredicted RBP20.65■□□□□ 0.9
CIPC-207ENST00000556863 PLEKHG1Q9ULL1 1385 aa20.65■□□□□ 0.9
CIPC-207ENST00000556863 NRXN1Q9ULB1 1477 aa20.64■□□□□ 0.89
CIPC-207ENST00000556863 SETBP1Q9Y6X0 1596 aa20.63■□□□□ 0.89
CIPC-207ENST00000556863 HDGFP51858 240 aaKnown RBP20.63■□□□□ 0.89
CIPC-207ENST00000556863 SETD1AO15047 1707 aaKnown RBP20.62■□□□□ 0.89
CIPC-207ENST00000556863 VGFO15240 615 aaPredicted RBP20.62■□□□□ 0.89
CIPC-207ENST00000556863 PIK3C2GO75747 1445 aa20.61■□□□□ 0.89
CIPC-207ENST00000556863 BCANQ96GW7 911 aa20.61■□□□□ 0.89
CIPC-207ENST00000556863 ADAMTS13Q76LX8 1427 aa20.6■□□□□ 0.89
CIPC-207ENST00000556863 ALKQ9UM73 1620 aa20.59■□□□□ 0.89
CIPC-207ENST00000556863 PRAG1Q86YV5 1406 aa20.59■□□□□ 0.89
CIPC-207ENST00000556863 DIP2AQ14689 1571 aa20.58■□□□□ 0.88
CIPC-207ENST00000556863 LAMC1P11047 1609 aa20.57■□□□□ 0.88
CIPC-207ENST00000556863 SLC26A8Q96RN1 970 aa20.57■□□□□ 0.88
CIPC-207ENST00000556863 TRPM1Q7Z4N2 1603 aa20.56■□□□□ 0.88
CIPC-207ENST00000556863 ASXL1Q8IXJ9 1541 aa20.56■□□□□ 0.88
CIPC-207ENST00000556863 KIAA1210Q9ULL0 1709 aa20.54■□□□□ 0.88
CIPC-207ENST00000556863 NBPF8Q3BBV2 869 aa20.54■□□□□ 0.88
CIPC-207ENST00000556863 TIMELESSQ9UNS1 1208 aa20.54■□□□□ 0.88
CIPC-207ENST00000556863 CFAP70Q5T0N1 1121 aa20.53■□□□□ 0.88
CIPC-207ENST00000556863 STAC3Q96MF2 364 aa20.53■□□□□ 0.88
CIPC-207ENST00000556863 STRCP1A6NGW2 1772 aa20.51■□□□□ 0.87
CIPC-207ENST00000556863 METP08581 1390 aa20.5■□□□□ 0.87
CIPC-207ENST00000556863 CHD2O14647 1828 aaKnown RBP20.5■□□□□ 0.87
CIPC-207ENST00000556863 C14orf93Q9H972 538 aaKnown RBP20.49■□□□□ 0.87
CIPC-207ENST00000556863 TBX22Q9Y458 520 aa20.49■□□□□ 0.87
CIPC-207ENST00000556863 DMRT2Q9Y5R5 561 aa20.49■□□□□ 0.87
CIPC-207ENST00000556863 ADGRB1O14514 1584 aa20.49■□□□□ 0.87
CIPC-207ENST00000556863 PTPRUQ92729 1446 aa20.48■□□□□ 0.87
CIPC-207ENST00000556863 TMEM132EQ6IEE7 984 aa20.47■□□□□ 0.87
CIPC-207ENST00000556863 RALGAPBQ86X10 1494 aa20.47■□□□□ 0.87
CIPC-207ENST00000556863 XRN1Q8IZH2 1706 aaKnown RBP20.47■□□□□ 0.87
CIPC-207ENST00000556863 NWD1Q149M9 1564 aa20.46■□□□□ 0.87
CIPC-207ENST00000556863 NBPF1Q3BBV0 1214 aa20.46■□□□□ 0.87
CIPC-207ENST00000556863 ZNF335Q9H4Z2 1342 aaPredicted RBP20.44■□□□□ 0.86
CIPC-207ENST00000556863 KNDC1Q76NI1 1749 aa20.44■□□□□ 0.86
CIPC-207ENST00000556863 ROCK2O75116 1388 aaKnown RBP20.42■□□□□ 0.86
CIPC-207ENST00000556863 PIK3R4Q99570 1358 aa20.42■□□□□ 0.86
CIPC-207ENST00000556863 YTHDC2Q9H6S0 1430 aaKnown RBP20.42■□□□□ 0.86
CIPC-207ENST00000556863 ARHGEF28Q8N1W1 1705 aaKnown RBP20.4■□□□□ 0.86
CIPC-207ENST00000556863 STK26Q9P289 416 aa20.4■□□□□ 0.86
CIPC-207ENST00000556863 CPS1P31327 1500 aa20.39■□□□□ 0.85
CIPC-207ENST00000556863 LRPPRCP42704 1394 aaKnown RBP20.39■□□□□ 0.85
CIPC-207ENST00000556863 AMOTL2Q9Y2J4 779 aa20.39■□□□□ 0.85
CIPC-207ENST00000556863 GPRASP1Q5JY77 1395 aa20.38■□□□□ 0.85
CIPC-207ENST00000556863 LTBP4Q8N2S1 1624 aa20.38■□□□□ 0.85
CIPC-207ENST00000556863 KCNA6P17658 529 aa20.37■□□□□ 0.85
CIPC-207ENST00000556863 NKTRP30414 1462 aaKnown RBP20.37■□□□□ 0.85
CIPC-207ENST00000556863 XIRP1Q702N8 1843 aaKnown RBP20.36■□□□□ 0.85
CIPC-207ENST00000556863 TECPR2O15040 1411 aa20.36■□□□□ 0.85
CIPC-207ENST00000556863 ROBO2Q9HCK4 1378 aa20.34■□□□□ 0.85
CIPC-207ENST00000556863 DLC1Q96QB1 1528 aa20.34■□□□□ 0.85
CIPC-207ENST00000556863 CARD11Q9BXL7 1154 aa20.34■□□□□ 0.85
CIPC-207ENST00000556863 TRAK1Q9UPV9 953 aa20.34■□□□□ 0.85
CIPC-207ENST00000556863 PTCH1Q13635 1447 aa20.34■□□□□ 0.85
CIPC-207ENST00000556863 ABCC11Q96J66 1382 aa20.34■□□□□ 0.85
CIPC-207ENST00000556863 RBM33Q96EV2 1170 aaKnown RBP20.32■□□□□ 0.84
CIPC-207ENST00000556863 PLEKHH1Q9ULM0 1364 aa20.32■□□□□ 0.84
CIPC-207ENST00000556863 LRRC7Q96NW7 1537 aa20.32■□□□□ 0.84
CIPC-207ENST00000556863 ZEB1P37275 1124 aaPredicted RBP20.31■□□□□ 0.84
CIPC-207ENST00000556863 NALCNQ8IZF0 1738 aa20.3■□□□□ 0.84
CIPC-207ENST00000556863 QRICH2Q9H0J4 1663 aa20.3■□□□□ 0.84
CIPC-207ENST00000556863 WAPLQ7Z5K2 1190 aa20.29■□□□□ 0.84
CIPC-207ENST00000556863 PROSER2Q86WR7 435 aaPredicted RBP20.29■□□□□ 0.84
CIPC-207ENST00000556863 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.29■□□□□ 0.84
CIPC-207ENST00000556863 FAM135BQ49AJ0 1406 aa20.27■□□□□ 0.84
CIPC-207ENST00000556863 TMEM94Q12767 1356 aa20.27■□□□□ 0.84
CIPC-207ENST00000556863 SAFB2Q14151 953 aaKnown RBP eCLIP20.27■□□□□ 0.84
CIPC-207ENST00000556863 PRAM1Q96QH2 718 aa20.27■□□□□ 0.84
CIPC-207ENST00000556863 USP47Q96K76 1375 aa20.26■□□□□ 0.83
CIPC-207ENST00000556863 POGKQ9P215 609 aa20.24■□□□□ 0.83
CIPC-207ENST00000556863 EIF3AQ14152 1382 aaKnown RBP20.23■□□□□ 0.83
CIPC-207ENST00000556863 SIRT1Q96EB6 747 aa20.22■□□□□ 0.83
CIPC-207ENST00000556863 CENPJQ9HC77 1338 aaPredicted RBP20.22■□□□□ 0.83
CIPC-207ENST00000556863 ADGRL3Q9HAR2 1447 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms