RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 ANKRD50Q9ULJ7 1429 aa24.56■■□□□ 1.52
RCCD1-207ENST00000556774 RBM33Q96EV2 1170 aaKnown RBP24.56■■□□□ 1.52
RCCD1-207ENST00000556774 PROSER2Q86WR7 435 aaPredicted RBP24.55■■□□□ 1.52
RCCD1-207ENST00000556774 UNC13BO14795 1591 aa24.54■■□□□ 1.52
RCCD1-207ENST00000556774 ZFYVE9O95405 1425 aa24.53■■□□□ 1.52
RCCD1-207ENST00000556774 SLC52A1Q9NWF4 448 aa24.53■■□□□ 1.52
RCCD1-207ENST00000556774 TMEM131LA2VDJ0 1609 aa24.53■■□□□ 1.52
RCCD1-207ENST00000556774 CHD2O14647 1828 aaKnown RBP24.52■■□□□ 1.52
RCCD1-207ENST00000556774 RGS17Q9UGC6 210 aaPredicted RBP24.52■■□□□ 1.52
RCCD1-207ENST00000556774 BCANQ96GW7 911 aa24.51■■□□□ 1.51
RCCD1-207ENST00000556774 RIMS2Q9UQ26 1411 aa24.49■■□□□ 1.51
RCCD1-207ENST00000556774 E9PCH4 1651 aa24.49■■□□□ 1.51
RCCD1-207ENST00000556774 PHLPP1O60346 1717 aa24.48■■□□□ 1.51
RCCD1-207ENST00000556774 PLEKHG1Q9ULL1 1385 aa24.48■■□□□ 1.51
RCCD1-207ENST00000556774 MSH6P52701 1360 aa24.47■■□□□ 1.51
RCCD1-207ENST00000556774 PPP1R15AO75807 674 aaPredicted RBP24.45■■□□□ 1.5
RCCD1-207ENST00000556774 IQGAP3Q86VI3 1631 aa24.43■■□□□ 1.5
RCCD1-207ENST00000556774 DIP2AQ14689 1571 aa24.39■■□□□ 1.5
RCCD1-207ENST00000556774 CHGAP10645 457 aaKnown RBP24.39■■□□□ 1.49
RCCD1-207ENST00000556774 POTEAQ6S8J7 498 aa24.38■■□□□ 1.49
RCCD1-207ENST00000556774 SLAIN2Q9P270 581 aa24.38■■□□□ 1.49
RCCD1-207ENST00000556774 COL16A1Q07092 1604 aaPredicted RBP24.38■■□□□ 1.49
RCCD1-207ENST00000556774 ADAMTS13Q76LX8 1427 aa24.36■■□□□ 1.49
RCCD1-207ENST00000556774 HDGFP51858 240 aaKnown RBP24.36■■□□□ 1.49
RCCD1-207ENST00000556774 NUTM2DQ5VT03 806 aaPredicted RBP24.36■■□□□ 1.49
RCCD1-207ENST00000556774 SETD1AO15047 1707 aaKnown RBP24.35■■□□□ 1.49
RCCD1-207ENST00000556774 ROCK1Q13464 1354 aa24.35■■□□□ 1.49
RCCD1-207ENST00000556774 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.35■■□□□ 1.49
RCCD1-207ENST00000556774 TBX22Q9Y458 520 aa24.34■■□□□ 1.49
RCCD1-207ENST00000556774 JCADQ9P266 1359 aa24.33■■□□□ 1.49
RCCD1-207ENST00000556774 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.33■■□□□ 1.49
RCCD1-207ENST00000556774 TRPM2O94759 1503 aa24.31■■□□□ 1.48
RCCD1-207ENST00000556774 NCOA3Q9Y6Q9 1424 aa24.31■■□□□ 1.48
RCCD1-207ENST00000556774 C14orf37Q86TY3 774 aa24.3■■□□□ 1.48
RCCD1-207ENST00000556774 SPHKAPQ2M3C7 1700 aa24.29■■□□□ 1.48
RCCD1-207ENST00000556774 NUP155O75694 1391 aa24.29■■□□□ 1.48
RCCD1-207ENST00000556774 AHDC1Q5TGY3 1603 aaPredicted RBP24.28■■□□□ 1.48
RCCD1-207ENST00000556774 PIK3R4Q99570 1358 aa24.28■■□□□ 1.48
RCCD1-207ENST00000556774 LRP6O75581 1613 aa24.27■■□□□ 1.48
RCCD1-207ENST00000556774 NRXN3Q9Y4C0 1643 aa24.27■■□□□ 1.48
RCCD1-207ENST00000556774 SHPRHQ149N8 1683 aa24.26■■□□□ 1.47
RCCD1-207ENST00000556774 PTPRUQ92729 1446 aa24.26■■□□□ 1.47
RCCD1-207ENST00000556774 ITGAEP38570 1179 aa24.25■■□□□ 1.47
RCCD1-207ENST00000556774 XRN1Q8IZH2 1706 aaKnown RBP24.24■■□□□ 1.47
RCCD1-207ENST00000556774 CADPS2Q86UW7 1296 aa24.22■■□□□ 1.47
RCCD1-207ENST00000556774 C19orf44Q9H6X5 657 aa24.22■■□□□ 1.47
RCCD1-207ENST00000556774 SETBP1Q9Y6X0 1596 aa24.21■■□□□ 1.47
RCCD1-207ENST00000556774 ATF3P18847 181 aa24.21■■□□□ 1.47
RCCD1-207ENST00000556774 AMOTL2Q9Y2J4 779 aa24.2■■□□□ 1.46
RCCD1-207ENST00000556774 SPATA31A6Q5VVP1 1343 aa24.18■■□□□ 1.46
RCCD1-207ENST00000556774 MEX3CQ5U5Q3 659 aaKnown RBP24.16■■□□□ 1.46
RCCD1-207ENST00000556774 PPARGC1BQ86YN6 1023 aaKnown RBP24.16■■□□□ 1.46
RCCD1-207ENST00000556774 CLTCL1P53675 1640 aa24.16■■□□□ 1.46
RCCD1-207ENST00000556774 DCCP43146 1447 aa24.16■■□□□ 1.46
RCCD1-207ENST00000556774 ASXL1Q8IXJ9 1541 aa24.15■■□□□ 1.46
RCCD1-207ENST00000556774 BRINP3Q76B58 766 aa24.14■■□□□ 1.45
RCCD1-207ENST00000556774 NHSL1Q5SYE7 1610 aa24.13■■□□□ 1.45
RCCD1-207ENST00000556774 NEXMIFQ5QGS0 1516 aa24.12■■□□□ 1.45
RCCD1-207ENST00000556774 ZNF326Q5BKZ1 582 aaKnown RBP24.12■■□□□ 1.45
RCCD1-207ENST00000556774 NALCNQ8IZF0 1738 aa24.12■■□□□ 1.45
RCCD1-207ENST00000556774 MST1RQ04912 1400 aa24.11■■□□□ 1.45
RCCD1-207ENST00000556774 METP08581 1390 aa24.11■■□□□ 1.45
RCCD1-207ENST00000556774 KIF1BO60333 1816 aa24.1■■□□□ 1.45
RCCD1-207ENST00000556774 ZNF772Q68DY9 489 aaPredicted RBP24.08■■□□□ 1.45
RCCD1-207ENST00000556774 NUTM2BA6NNL0 878 aaPredicted RBP24.06■■□□□ 1.44
RCCD1-207ENST00000556774 NUTM2EB1AL46 878 aaPredicted RBP24.06■■□□□ 1.44
RCCD1-207ENST00000556774 NUTM2AQ8IVF1 878 aaPredicted RBP24.06■■□□□ 1.44
RCCD1-207ENST00000556774 ADGRL3Q9HAR2 1447 aa24.06■■□□□ 1.44
RCCD1-207ENST00000556774 TRIM52Q96A61 297 aa24.05■■□□□ 1.44
RCCD1-207ENST00000556774 SETD5Q9C0A6 1442 aa24.04■■□□□ 1.44
RCCD1-207ENST00000556774 NAIPQ13075 1403 aa24■■□□□ 1.43
RCCD1-207ENST00000556774 DDX17Q92841 729 aaKnown RBP23.99■■□□□ 1.43
RCCD1-207ENST00000556774 RRBP1Q9P2E9 1410 aaKnown RBP23.99■■□□□ 1.43
RCCD1-207ENST00000556774 AFF2P51816 1311 aa23.98■■□□□ 1.43
RCCD1-207ENST00000556774 UPF1Q92900 1129 aaKnown RBP eCLIP23.97■■□□□ 1.43
RCCD1-207ENST00000556774 CDK12Q9NYV4 1490 aaPredicted RBP23.96■■□□□ 1.43
RCCD1-207ENST00000556774 PNPLA6Q8IY17 1366 aa23.96■■□□□ 1.43
RCCD1-207ENST00000556774 RXRBP28702 533 aa23.96■■□□□ 1.43
RCCD1-207ENST00000556774 PTCH1Q13635 1447 aa23.95■■□□□ 1.42
RCCD1-207ENST00000556774 LAMC1P11047 1609 aa23.95■■□□□ 1.42
RCCD1-207ENST00000556774 C1orf167Q5SNV9 1468 aa23.94■■□□□ 1.42
RCCD1-207ENST00000556774 PPLO60437 1756 aa23.94■■□□□ 1.42
RCCD1-207ENST00000556774 LRRC59Q96AG4 307 aaKnown RBP23.94■■□□□ 1.42
RCCD1-207ENST00000556774 ROBO2Q9HCK4 1378 aa23.92■■□□□ 1.42
RCCD1-207ENST00000556774 C8orf37Q96NL8 207 aa23.91■■□□□ 1.42
RCCD1-207ENST00000556774 RGS12O14924 1447 aa23.9■■□□□ 1.42
RCCD1-207ENST00000556774 HFM1A2PYH4 1435 aa23.88■■□□□ 1.41
RCCD1-207ENST00000556774 PRAG1Q86YV5 1406 aa23.88■■□□□ 1.41
RCCD1-207ENST00000556774 VGFO15240 615 aaPredicted RBP23.87■■□□□ 1.41
RCCD1-207ENST00000556774 ORAI2Q96SN7 254 aa23.84■■□□□ 1.41
RCCD1-207ENST00000556774 ADAMTS2O95450 1211 aa23.83■■□□□ 1.41
RCCD1-207ENST00000556774 QTRT2Q9H974 415 aaKnown RBP23.83■■□□□ 1.41
RCCD1-207ENST00000556774 SLC4A1APQ9BWU0 796 aaKnown RBP23.82■■□□□ 1.4
RCCD1-207ENST00000556774 CDC42BPGQ6DT37 1551 aa23.82■■□□□ 1.4
RCCD1-207ENST00000556774 RPGRIP1LQ68CZ1 1315 aa23.82■■□□□ 1.4
RCCD1-207ENST00000556774 COL22A1Q8NFW1 1626 aaPredicted RBP23.81■■□□□ 1.4
RCCD1-207ENST00000556774 RBM6P78332 1123 aaKnown RBP23.81■■□□□ 1.4
RCCD1-207ENST00000556774 SOS2Q07890 1332 aaPredicted RBP23.81■■□□□ 1.4
RCCD1-207ENST00000556774 NGLY1Q96IV0 654 aa23.79■■□□□ 1.4
RCCD1-207ENST00000556774 IFT172Q9UG01 1749 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms