RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 HS3ST6Q96QI5 342 aa7.62□□□□□ -1.19
GPHN-214ENST00000556633 SEPT9Q9UHD8 586 aaPredicted RBP7.62□□□□□ -1.19
GPHN-214ENST00000556633 ATP1B4Q9UN42 357 aaPredicted RBP7.62□□□□□ -1.19
GPHN-214ENST00000556633 MYSM1Q5VVJ2 828 aa7.61□□□□□ -1.19
GPHN-214ENST00000556633 TBC1D2Q9BYX2 928 aa7.61□□□□□ -1.19
GPHN-214ENST00000556633 POLR3EQ9NVU0 708 aa7.61□□□□□ -1.19
GPHN-214ENST00000556633 VPS9D1Q9Y2B5 631 aa7.61□□□□□ -1.19
GPHN-214ENST00000556633 POTEB3A0JP26 581 aa7.6□□□□□ -1.19
GPHN-214ENST00000556633 DIXDC1Q155Q3 683 aa7.6□□□□□ -1.19
GPHN-214ENST00000556633 POTEBQ6S5H4 581 aa7.6□□□□□ -1.19
GPHN-214ENST00000556633 RDH13Q8NBN7 331 aa7.6□□□□□ -1.19
GPHN-214ENST00000556633 SWT1Q5T5J6 900 aaKnown RBP7.59□□□□□ -1.19
GPHN-214ENST00000556633 CLK2P49760 499 aaKnown RBP7.58□□□□□ -1.2
GPHN-214ENST00000556633 FAM98CQ17RN3 349 aaKnown RBP7.58□□□□□ -1.2
GPHN-214ENST00000556633 LCE2DQ5TA82 110 aaPredicted RBP7.58□□□□□ -1.2
GPHN-214ENST00000556633 NUTM1Q86Y26 1132 aa7.58□□□□□ -1.2
GPHN-214ENST00000556633 PROCA1Q8NCQ7 364 aaPredicted RBP7.58□□□□□ -1.2
GPHN-214ENST00000556633 SPIRE2Q8WWL2 714 aa7.58□□□□□ -1.2
GPHN-214ENST00000556633 HDGFP51858 240 aaKnown RBP7.57□□□□□ -1.2
GPHN-214ENST00000556633 NBPF3Q9H094 633 aa7.57□□□□□ -1.2
GPHN-214ENST00000556633 TK2O00142 265 aa7.56□□□□□ -1.2
GPHN-214ENST00000556633 RSPH4AQ5TD94 716 aa7.56□□□□□ -1.2
GPHN-214ENST00000556633 LAPTM4BQ86VI4 370 aa7.56□□□□□ -1.2
GPHN-214ENST00000556633 SLC4A3P48751 1232 aa7.55□□□□□ -1.2
GPHN-214ENST00000556633 LSM11P83369 360 aaKnown RBP eCLIP7.55□□□□□ -1.2
GPHN-214ENST00000556633 SAMD7Q7Z3H4 446 aa7.55□□□□□ -1.2
GPHN-214ENST00000556633 RIC3Q7Z5B4 369 aa7.55□□□□□ -1.2
GPHN-214ENST00000556633 LIMD1Q9UGP4 676 aa7.55□□□□□ -1.2
GPHN-214ENST00000556633 BHMG1C9JSJ3 638 aaPredicted RBP7.54□□□□□ -1.2
GPHN-214ENST00000556633 ADGRD1Q6QNK2 874 aa7.54□□□□□ -1.2
GPHN-214ENST00000556633 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.54□□□□□ -1.2
GPHN-214ENST00000556633 MOXD2PA6NHM9 499 aa7.53□□□□□ -1.2
GPHN-214ENST00000556633 RNF40O75150 1001 aa7.53□□□□□ -1.2
GPHN-214ENST00000556633 KDM4AO75164 1064 aa7.53□□□□□ -1.2
GPHN-214ENST00000556633 SLC10A3P09131 477 aa7.53□□□□□ -1.2
GPHN-214ENST00000556633 GCGRP47871 477 aa7.53□□□□□ -1.2
GPHN-214ENST00000556633 FLIIQ13045 1269 aa7.53□□□□□ -1.2
GPHN-214ENST00000556633 MRPL50Q8N5N7 158 aaKnown RBP7.53□□□□□ -1.2
GPHN-214ENST00000556633 SPTLC1O15269 473 aa7.52□□□□□ -1.21
GPHN-214ENST00000556633 RSBN1LQ6PCB5 846 aaPredicted RBP7.52□□□□□ -1.21
GPHN-214ENST00000556633 SLF2Q8IX21 1173 aa7.52□□□□□ -1.21
GPHN-214ENST00000556633 ZFRQ96KR1 1074 aaKnown RBP7.52□□□□□ -1.21
GPHN-214ENST00000556633 NDUFV2P19404 249 aa7.51□□□□□ -1.21
GPHN-214ENST00000556633 USP46P62068 366 aa7.51□□□□□ -1.21
GPHN-214ENST00000556633 CSPP1Q1MSJ5 1256 aa7.51□□□□□ -1.21
GPHN-214ENST00000556633 TUSC1Q2TAM9 212 aa7.5□□□□□ -1.21
GPHN-214ENST00000556633 ANKRD13DQ6ZTN6 518 aa7.5□□□□□ -1.21
GPHN-214ENST00000556633 ZMYND15Q9H091 742 aa7.5□□□□□ -1.21
GPHN-214ENST00000556633 HOXA2O43364 376 aa7.49□□□□□ -1.21
GPHN-214ENST00000556633 CFHP08603 1231 aa7.49□□□□□ -1.21
GPHN-214ENST00000556633 GJA5P36382 358 aa7.49□□□□□ -1.21
GPHN-214ENST00000556633 RFC5P40937 340 aa7.49□□□□□ -1.21
GPHN-214ENST00000556633 FBXO31Q5XUX0 539 aaPredicted RBP7.49□□□□□ -1.21
GPHN-214ENST00000556633 STAC3Q96MF2 364 aa7.49□□□□□ -1.21
GPHN-214ENST00000556633 HRO43593 1189 aa7.48□□□□□ -1.21
GPHN-214ENST00000556633 MCM6Q14566 821 aa7.48□□□□□ -1.21
GPHN-214ENST00000556633 QPCTQ16769 361 aa7.48□□□□□ -1.21
GPHN-214ENST00000556633 LRCH3Q96II8 777 aa7.48□□□□□ -1.21
GPHN-214ENST00000556633 PCDHB15Q9Y5E8 787 aa7.48□□□□□ -1.21
GPHN-214ENST00000556633 GOLGA8CPA6NN73 597 aa7.47□□□□□ -1.21
GPHN-214ENST00000556633 SUPT5HO00267 1087 aaKnown RBP7.47□□□□□ -1.21
GPHN-214ENST00000556633 FDX1P10109 184 aa7.47□□□□□ -1.21
GPHN-214ENST00000556633 FUT2Q10981 343 aa7.47□□□□□ -1.21
GPHN-214ENST00000556633 PPP2R2DQ66LE6 453 aa7.47□□□□□ -1.21
GPHN-214ENST00000556633 HLA-CQ95604 372 aa7.47□□□□□ -1.21
GPHN-214ENST00000556633 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.47□□□□□ -1.21
GPHN-214ENST00000556633 NUTM2BA6NNL0 878 aaPredicted RBP7.46□□□□□ -1.22
GPHN-214ENST00000556633 NUTM2EB1AL46 878 aaPredicted RBP7.46□□□□□ -1.22
GPHN-214ENST00000556633 LILRB3O75022 631 aa7.46□□□□□ -1.22
GPHN-214ENST00000556633 GUCA2AQ02747 115 aa7.46□□□□□ -1.22
GPHN-214ENST00000556633 NUTM2DQ5VT03 806 aaPredicted RBP7.46□□□□□ -1.22
GPHN-214ENST00000556633 NUTM2AQ8IVF1 878 aaPredicted RBP7.46□□□□□ -1.22
GPHN-214ENST00000556633 ANKK1Q8NFD2 765 aa7.46□□□□□ -1.22
GPHN-214ENST00000556633 UBTFP17480 764 aaKnown RBP7.45□□□□□ -1.22
GPHN-214ENST00000556633 KMT5BQ4FZB7 885 aa7.45□□□□□ -1.22
GPHN-214ENST00000556633 GRIPAP1Q4V328 841 aa7.45□□□□□ -1.22
GPHN-214ENST00000556633 TMEM259Q4ZIN3 620 aa7.45□□□□□ -1.22
GPHN-214ENST00000556633 PRPF38BQ5VTL8 546 aaKnown RBP7.45□□□□□ -1.22
GPHN-214ENST00000556633 CABLES1Q8TDN4 633 aa7.45□□□□□ -1.22
GPHN-214ENST00000556633 NECTIN2Q92692 538 aa7.45□□□□□ -1.22
GPHN-214ENST00000556633 RTL5Q5HYW3 569 aaPredicted RBP7.44□□□□□ -1.22
GPHN-214ENST00000556633 BANK1Q8NDB2 785 aa7.44□□□□□ -1.22
GPHN-214ENST00000556633 ZBTB3Q9H5J0 574 aa7.44□□□□□ -1.22
GPHN-214ENST00000556633 PCDHGC3Q9UN70 934 aa7.44□□□□□ -1.22
GPHN-214ENST00000556633 SPDYE5A6NIY4 337 aa7.43□□□□□ -1.22
GPHN-214ENST00000556633 HRCP23327 699 aa7.43□□□□□ -1.22
GPHN-214ENST00000556633 ATP6V1AP38606 617 aa7.43□□□□□ -1.22
GPHN-214ENST00000556633 BCAMP50895 628 aa7.43□□□□□ -1.22
GPHN-214ENST00000556633 SOWAHBA6NEL2 793 aa7.42□□□□□ -1.22
GPHN-214ENST00000556633 WNT2BQ93097 391 aa7.42□□□□□ -1.22
GPHN-214ENST00000556633 CLUAP1Q96AJ1 413 aa7.42□□□□□ -1.22
GPHN-214ENST00000556633 SNRKQ9NRH2 765 aa7.42□□□□□ -1.22
GPHN-214ENST00000556633 HPS5Q9UPZ3 1129 aa7.42□□□□□ -1.22
GPHN-214ENST00000556633 ACTN4O43707 911 aaKnown RBP7.41□□□□□ -1.22
GPHN-214ENST00000556633 AP1G2O75843 785 aa7.41□□□□□ -1.22
GPHN-214ENST00000556633 PPP4CP60510 307 aa7.41□□□□□ -1.22
GPHN-214ENST00000556633 MTMR2Q13614 643 aa7.41□□□□□ -1.22
GPHN-214ENST00000556633 PRR14Q9BWN1 585 aa7.41□□□□□ -1.22
GPHN-214ENST00000556633 KRTAP3-3Q9BYR6 98 aa7.41□□□□□ -1.22
GPHN-214ENST00000556633 KRTAP3-2Q9BYR7 98 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms