RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 ATP6V1E2Q96A05 226 aa2.31□□□□□ -2.04
KTN1-224ENST00000556631 IPO9Q96P70 1041 aaKnown RBP2.31□□□□□ -2.04
KTN1-224ENST00000556631 GPBP1L1Q9HC44 474 aaPredicted RBP2.31□□□□□ -2.04
KTN1-224ENST00000556631 RBM27Q9P2N5 1060 aaKnown RBP2.31□□□□□ -2.04
KTN1-224ENST00000556631 FGD1P98174 961 aa2.31□□□□□ -2.04
KTN1-224ENST00000556631 ATP2B2Q01814 1243 aa2.31□□□□□ -2.04
KTN1-224ENST00000556631 CERS3Q8IU89 383 aa2.31□□□□□ -2.04
KTN1-224ENST00000556631 ZSCAN29Q8IWY8 852 aaPredicted RBP2.31□□□□□ -2.04
KTN1-224ENST00000556631 ATG3Q9NT62 314 aa2.31□□□□□ -2.04
KTN1-224ENST00000556631 PDE4AP27815 886 aa2.31□□□□□ -2.04
KTN1-224ENST00000556631 WDR75Q8IWA0 830 aaKnown RBP2.31□□□□□ -2.04
KTN1-224ENST00000556631 SREK1Q8WXA9 508 aaKnown RBP2.31□□□□□ -2.04
KTN1-224ENST00000556631 MRFAP1L1Q96HT8 127 aa2.31□□□□□ -2.04
KTN1-224ENST00000556631 PNNQ9H307 717 aaKnown RBP2.31□□□□□ -2.04
KTN1-224ENST00000556631 DCAF1Q9Y4B6 1507 aa2.31□□□□□ -2.04
KTN1-224ENST00000556631 TPD52L2O43399 206 aaKnown RBP2.3□□□□□ -2.04
KTN1-224ENST00000556631 S100BP04271 92 aaPredicted RBP2.3□□□□□ -2.04
KTN1-224ENST00000556631 ARHGEF1Q92888 912 aaKnown RBP2.3□□□□□ -2.04
KTN1-224ENST00000556631 DNAJC2Q99543 621 aaKnown RBP2.3□□□□□ -2.04
KTN1-224ENST00000556631 MARCH6O60337 910 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 ABL1P00519 1130 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 ERCC5P28715 1186 aaPredicted RBP2.3□□□□□ -2.04
KTN1-224ENST00000556631 EXOC8Q8IYI6 725 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 FNBP4Q8N3X1 1017 aaPredicted RBP2.3□□□□□ -2.04
KTN1-224ENST00000556631 CLEC11AQ9Y240 323 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 IVNS1ABPQ9Y6Y0 642 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 TRAK2O60296 914 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 GRM1Q13255 1194 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 KIAA1211Q6ZU35 1233 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 NUTM1Q86Y26 1132 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 RETREG2Q8NC44 543 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 ACRBPQ8NEB7 543 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 CPLX3Q8WVH0 158 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 CCDC34Q96HJ3 373 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 GOLIM4O00461 696 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 FAM193AP78312 1265 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 BIRC2Q13490 618 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 TAF3Q5VWG9 929 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 CLUAP1Q96AJ1 413 aa2.3□□□□□ -2.04
KTN1-224ENST00000556631 GOLGA6L3A6NEY3 463 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 STK10O94804 968 aaKnown RBP2.29□□□□□ -2.04
KTN1-224ENST00000556631 ERCC3P19447 782 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 ARID4AP29374 1257 aaPredicted RBP2.29□□□□□ -2.04
KTN1-224ENST00000556631 MNX1P50219 401 aaPredicted RBP2.29□□□□□ -2.04
KTN1-224ENST00000556631 DIXDC1Q155Q3 683 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 WWC2Q6AWC2 1192 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 KRT18P05783 430 aaKnown RBP2.29□□□□□ -2.04
KTN1-224ENST00000556631 SEMA3FQ13275 785 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 RALBP1Q15311 655 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 TSNAXIP1Q2TAA8 658 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 CDCA8Q53HL2 280 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 RASSF8Q8NHQ8 419 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 UBXN4Q92575 508 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 GRXCR2A6NFK2 248 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 NBPF7P0C2Y1 421 aaPredicted RBP2.29□□□□□ -2.04
KTN1-224ENST00000556631 LIG1P18858 919 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 TRIM29Q14134 588 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 CC2D1BQ5T0F9 858 aaKnown RBP2.29□□□□□ -2.04
KTN1-224ENST00000556631 SOGA3Q5TF21 947 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 GIPC2Q8TF65 315 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 LARP6Q9BRS8 491 aaKnown RBP2.29□□□□□ -2.04
KTN1-224ENST00000556631 PLEKHD1A6NEE1 506 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 GOLGA6L4A6NEF3 574 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 HTATSF1O43719 755 aaKnown RBP2.29□□□□□ -2.04
KTN1-224ENST00000556631 IGSF3O75054 1194 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 CCDC181Q5TID7 509 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 CREBRFQ8IUR6 639 aa2.29□□□□□ -2.04
KTN1-224ENST00000556631 ZFP91Q96JP5 570 aaPredicted RBP2.29□□□□□ -2.04
KTN1-224ENST00000556631 PDE4DQ08499 809 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 CSPP1Q1MSJ5 1256 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 CC2D2BQ6DHV5 1058 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 LARP1Q6PKG0 1096 aaKnown RBP2.28□□□□□ -2.04
KTN1-224ENST00000556631 HDGFL2Q7Z4V5 671 aaPredicted RBP2.28□□□□□ -2.04
KTN1-224ENST00000556631 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.28□□□□□ -2.04
KTN1-224ENST00000556631 CAPN10Q9HC96 672 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 FRMD4BQ9Y2L6 1034 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 SSUH2Q9Y2M2 353 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 MRVI1Q9Y6F6 885 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 HDGFP51858 240 aaKnown RBP2.28□□□□□ -2.04
KTN1-224ENST00000556631 PDE1CQ14123 709 aaPredicted RBP2.28□□□□□ -2.04
KTN1-224ENST00000556631 ZNF354CQ86Y25 554 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 HSCBQ8IWL3 235 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 CFAP53Q96M91 514 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 TRIM55Q9BYV6 548 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 POLR3EQ9NVU0 708 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 LOC105371045A0A1W2PR82 267 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 PEX14O75381 377 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 CCAR2Q8N163 923 aaKnown RBP2.28□□□□□ -2.04
KTN1-224ENST00000556631 LTV1Q96GA3 475 aaPredicted RBP2.28□□□□□ -2.04
KTN1-224ENST00000556631 SCLT1Q96NL6 688 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 VRTNQ9H8Y1 702 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 TBC1D12O60347 775 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 HMMRO75330 724 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 CPEP16870 476 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 TOMM22Q9NS69 142 aa2.28□□□□□ -2.04
KTN1-224ENST00000556631 ZNHIT6Q9NWK9 470 aaKnown RBP2.28□□□□□ -2.04
KTN1-224ENST00000556631 MAGEC2Q9UBF1 373 aaPredicted RBP2.28□□□□□ -2.04
KTN1-224ENST00000556631 BRD1O95696 1058 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 PSMA4P25789 261 aaKnown RBP2.27□□□□□ -2.05
KTN1-224ENST00000556631 LMOD1P29536 600 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms