RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PPP1R15AO75807 674 aaPredicted RBP21.88■■□□□ 1.09
ACTN1-219ENST00000556432 LMTK2Q8IWU2 1503 aa21.88■■□□□ 1.09
ACTN1-219ENST00000556432 ANKRD30AQ9BXX3 1397 aa21.87■■□□□ 1.09
ACTN1-219ENST00000556432 C14orf37Q86TY3 774 aa21.87■■□□□ 1.09
ACTN1-219ENST00000556432 SLC52A1Q9NWF4 448 aa21.85■■□□□ 1.09
ACTN1-219ENST00000556432 NOS1P29475 1434 aa21.85■■□□□ 1.09
ACTN1-219ENST00000556432 APLP2Q06481 763 aa21.84■■□□□ 1.09
ACTN1-219ENST00000556432 TRIM52Q96A61 297 aa21.84■■□□□ 1.09
ACTN1-219ENST00000556432 COL16A1Q07092 1604 aaPredicted RBP21.81■■□□□ 1.08
ACTN1-219ENST00000556432 LOC105371045A0A1W2PR82 267 aa21.81■■□□□ 1.08
ACTN1-219ENST00000556432 ZNF772Q68DY9 489 aaPredicted RBP21.81■■□□□ 1.08
ACTN1-219ENST00000556432 PLEKHG1Q9ULL1 1385 aa21.81■■□□□ 1.08
ACTN1-219ENST00000556432 SPATA31A6Q5VVP1 1343 aa21.8■■□□□ 1.08
ACTN1-219ENST00000556432 FGD6Q6ZV73 1430 aa21.8■■□□□ 1.08
ACTN1-219ENST00000556432 HDGFP51858 240 aaKnown RBP21.8■■□□□ 1.08
ACTN1-219ENST00000556432 LRP6O75581 1613 aa21.8■■□□□ 1.08
ACTN1-219ENST00000556432 RIMS2Q9UQ26 1411 aa21.8■■□□□ 1.08
ACTN1-219ENST00000556432 UPF1Q92900 1129 aaKnown RBP eCLIP21.78■■□□□ 1.08
ACTN1-219ENST00000556432 ZFYVE9O95405 1425 aa21.78■■□□□ 1.08
ACTN1-219ENST00000556432 CHD2O14647 1828 aaKnown RBP21.78■■□□□ 1.08
ACTN1-219ENST00000556432 CHGAP10645 457 aaKnown RBP21.77■■□□□ 1.08
ACTN1-219ENST00000556432 ATF3P18847 181 aa21.76■■□□□ 1.07
ACTN1-219ENST00000556432 RPRD2Q5VT52 1461 aaKnown RBP21.75■■□□□ 1.07
ACTN1-219ENST00000556432 MYO5BQ9ULV0 1848 aa21.75■■□□□ 1.07
ACTN1-219ENST00000556432 GCC2Q8IWJ2 1684 aa21.75■■□□□ 1.07
ACTN1-219ENST00000556432 CADPS2Q86UW7 1296 aa21.74■■□□□ 1.07
ACTN1-219ENST00000556432 NCOA3Q9Y6Q9 1424 aa21.73■■□□□ 1.07
ACTN1-219ENST00000556432 NUTM2BA6NNL0 878 aaPredicted RBP21.73■■□□□ 1.07
ACTN1-219ENST00000556432 NUTM2EB1AL46 878 aaPredicted RBP21.73■■□□□ 1.07
ACTN1-219ENST00000556432 NUTM2DQ5VT03 806 aaPredicted RBP21.73■■□□□ 1.07
ACTN1-219ENST00000556432 NUTM2AQ8IVF1 878 aaPredicted RBP21.73■■□□□ 1.07
ACTN1-219ENST00000556432 TBX22Q9Y458 520 aa21.73■■□□□ 1.07
ACTN1-219ENST00000556432 RXRBP28702 533 aa21.72■■□□□ 1.07
ACTN1-219ENST00000556432 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.72■■□□□ 1.07
ACTN1-219ENST00000556432 AHDC1Q5TGY3 1603 aaPredicted RBP21.71■■□□□ 1.07
ACTN1-219ENST00000556432 C19orf44Q9H6X5 657 aa21.71■■□□□ 1.07
ACTN1-219ENST00000556432 SHPRHQ149N8 1683 aa21.7■■□□□ 1.06
ACTN1-219ENST00000556432 TMEM131LA2VDJ0 1609 aa21.69■■□□□ 1.06
ACTN1-219ENST00000556432 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.69■■□□□ 1.06
ACTN1-219ENST00000556432 FAM50AQ14320 339 aaKnown RBP21.69■■□□□ 1.06
ACTN1-219ENST00000556432 ANKRD50Q9ULJ7 1429 aa21.69■■□□□ 1.06
ACTN1-219ENST00000556432 ADGRL2O95490 1459 aa21.68■■□□□ 1.06
ACTN1-219ENST00000556432 DIP2AQ14689 1571 aa21.66■■□□□ 1.06
ACTN1-219ENST00000556432 ADAMTS13Q76LX8 1427 aa21.65■■□□□ 1.06
ACTN1-219ENST00000556432 BRINP3Q76B58 766 aa21.65■■□□□ 1.06
ACTN1-219ENST00000556432 PIK3R4Q99570 1358 aa21.64■■□□□ 1.06
ACTN1-219ENST00000556432 AFF2P51816 1311 aa21.64■■□□□ 1.05
ACTN1-219ENST00000556432 AMOTL2Q9Y2J4 779 aa21.63■■□□□ 1.05
ACTN1-219ENST00000556432 TRPM2O94759 1503 aa21.62■■□□□ 1.05
ACTN1-219ENST00000556432 CDK12Q9NYV4 1490 aaPredicted RBP21.61■■□□□ 1.05
ACTN1-219ENST00000556432 C8orf37Q96NL8 207 aa21.58■■□□□ 1.05
ACTN1-219ENST00000556432 ASXL1Q8IXJ9 1541 aa21.58■■□□□ 1.04
ACTN1-219ENST00000556432 DCCP43146 1447 aa21.56■■□□□ 1.04
ACTN1-219ENST00000556432 PTPRUQ92729 1446 aa21.56■■□□□ 1.04
ACTN1-219ENST00000556432 UNC13BO14795 1591 aa21.56■■□□□ 1.04
ACTN1-219ENST00000556432 E9PCH4 1651 aa21.55■■□□□ 1.04
ACTN1-219ENST00000556432 SETD5Q9C0A6 1442 aa21.55■■□□□ 1.04
ACTN1-219ENST00000556432 LRRC59Q96AG4 307 aaKnown RBP21.54■■□□□ 1.04
ACTN1-219ENST00000556432 QTRT2Q9H974 415 aaKnown RBP21.54■■□□□ 1.04
ACTN1-219ENST00000556432 RGS12O14924 1447 aa21.54■■□□□ 1.04
ACTN1-219ENST00000556432 RBM6P78332 1123 aaKnown RBP21.52■■□□□ 1.04
ACTN1-219ENST00000556432 MST1RQ04912 1400 aa21.52■■□□□ 1.04
ACTN1-219ENST00000556432 DDX17Q92841 729 aaKnown RBP21.51■■□□□ 1.03
ACTN1-219ENST00000556432 NHSL1Q5SYE7 1610 aa21.5■■□□□ 1.03
ACTN1-219ENST00000556432 ADAMTS2O95450 1211 aa21.49■■□□□ 1.03
ACTN1-219ENST00000556432 ZNF326Q5BKZ1 582 aaKnown RBP21.49■■□□□ 1.03
ACTN1-219ENST00000556432 XRN1Q8IZH2 1706 aaKnown RBP21.49■■□□□ 1.03
ACTN1-219ENST00000556432 PNPLA6Q8IY17 1366 aa21.48■■□□□ 1.03
ACTN1-219ENST00000556432 NGLY1Q96IV0 654 aa21.48■■□□□ 1.03
ACTN1-219ENST00000556432 IQGAP3Q86VI3 1631 aa21.47■■□□□ 1.03
ACTN1-219ENST00000556432 NUP155O75694 1391 aa21.47■■□□□ 1.03
ACTN1-219ENST00000556432 SRCAPQ6ZRS2 3230 aa21.46■■□□□ 1.03
ACTN1-219ENST00000556432 ADGRL3Q9HAR2 1447 aa21.45■■□□□ 1.02
ACTN1-219ENST00000556432 SETBP1Q9Y6X0 1596 aa21.44■■□□□ 1.02
ACTN1-219ENST00000556432 NRXN3Q9Y4C0 1643 aa21.44■■□□□ 1.02
ACTN1-219ENST00000556432 METP08581 1390 aa21.44■■□□□ 1.02
ACTN1-219ENST00000556432 ATAD2Q6PL18 1390 aa21.44■■□□□ 1.02
ACTN1-219ENST00000556432 ROCK1Q13464 1354 aa21.41■■□□□ 1.02
ACTN1-219ENST00000556432 NALCNQ8IZF0 1738 aa21.39■■□□□ 1.01
ACTN1-219ENST00000556432 ITGAEP38570 1179 aa21.39■■□□□ 1.01
ACTN1-219ENST00000556432 FOXD1Q16676 465 aa21.39■■□□□ 1.01
ACTN1-219ENST00000556432 USP21Q9UK80 565 aa21.39■■□□□ 1.01
ACTN1-219ENST00000556432 ZRANB1Q9UGI0 708 aa21.37■■□□□ 1.01
ACTN1-219ENST00000556432 TRPC5Q9UL62 973 aaPredicted RBP21.36■■□□□ 1.01
ACTN1-219ENST00000556432 C1orf167Q5SNV9 1468 aa21.36■■□□□ 1.01
ACTN1-219ENST00000556432 SPHKAPQ2M3C7 1700 aa21.35■■□□□ 1.01
ACTN1-219ENST00000556432 ORAI2Q96SN7 254 aa21.32■■□□□ 1
ACTN1-219ENST00000556432 SOS2Q07890 1332 aaPredicted RBP21.3■■□□□ 1
ACTN1-219ENST00000556432 PTCH1Q13635 1447 aa21.3■■□□□ 1
ACTN1-219ENST00000556432 NEXMIFQ5QGS0 1516 aa21.29■■□□□ 1
ACTN1-219ENST00000556432 FNBP4Q8N3X1 1017 aaPredicted RBP21.28■■□□□ 1
ACTN1-219ENST00000556432 ATRNO75882 1429 aa21.28■■□□□ 1
ACTN1-219ENST00000556432 ROBO2Q9HCK4 1378 aa21.27■■□□□ 1
ACTN1-219ENST00000556432 LAMC1P11047 1609 aa21.27■■□□□ 1
ACTN1-219ENST00000556432 CLTCL1P53675 1640 aa21.27■■□□□ 1
ACTN1-219ENST00000556432 EP400Q96L91 3159 aa21.24■□□□□ 0.99
ACTN1-219ENST00000556432 CCDC125Q86Z20 511 aa21.23■□□□□ 0.99
ACTN1-219ENST00000556432 VGFO15240 615 aaPredicted RBP21.22■□□□□ 0.99
ACTN1-219ENST00000556432 ESCO1Q5FWF5 840 aa21.22■□□□□ 0.99
ACTN1-219ENST00000556432 NPHP3Q7Z494 1330 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms