RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 TMUB1Q9BVT8 246 aa8.56□□□□□ -1.04
CDKN3-210ENST00000556305 COL9A1P20849 921 aa8.55□□□□□ -1.04
CDKN3-210ENST00000556305 DIXDC1Q155Q3 683 aa8.55□□□□□ -1.04
CDKN3-210ENST00000556305 KCNK17Q96T54 332 aa8.55□□□□□ -1.04
CDKN3-210ENST00000556305 FAM217BQ9NTX9 383 aaPredicted RBP8.55□□□□□ -1.04
CDKN3-210ENST00000556305 TRIM6-TRIM34B2RNG4 842 aa8.54□□□□□ -1.04
CDKN3-210ENST00000556305 BHMG1C9JSJ3 638 aaPredicted RBP8.54□□□□□ -1.04
CDKN3-210ENST00000556305 ONECUT3O60422 494 aaPredicted RBP8.54□□□□□ -1.04
CDKN3-210ENST00000556305 PHOX2BQ99453 314 aa8.54□□□□□ -1.04
CDKN3-210ENST00000556305 REPIN1Q9BWE0 567 aaKnown RBP8.54□□□□□ -1.04
CDKN3-210ENST00000556305 SLC4A5Q9BY07 1137 aa8.54□□□□□ -1.04
CDKN3-210ENST00000556305 DNAJB2P25686 324 aa8.53□□□□□ -1.04
CDKN3-210ENST00000556305 SULF1Q8IWU6 871 aa8.53□□□□□ -1.04
CDKN3-210ENST00000556305 BEGAINQ9BUH8 593 aa8.53□□□□□ -1.04
CDKN3-210ENST00000556305 ATP1B4Q9UN42 357 aaPredicted RBP8.53□□□□□ -1.04
CDKN3-210ENST00000556305 SH3D19Q5HYK7 790 aa8.52□□□□□ -1.05
CDKN3-210ENST00000556305 NUDT18Q6ZVK8 323 aa8.52□□□□□ -1.05
CDKN3-210ENST00000556305 PNMA3Q9UL41 463 aa8.52□□□□□ -1.05
CDKN3-210ENST00000556305 RCCD1A6NED2 376 aa8.51□□□□□ -1.05
CDKN3-210ENST00000556305 TATDN2Q93075 761 aa8.51□□□□□ -1.05
CDKN3-210ENST00000556305 TSKSQ9UJT2 592 aa8.51□□□□□ -1.05
CDKN3-210ENST00000556305 SLC4A3P48751 1232 aa8.5□□□□□ -1.05
CDKN3-210ENST00000556305 RSPH4AQ5TD94 716 aa8.5□□□□□ -1.05
CDKN3-210ENST00000556305 SKIV2LQ15477 1246 aaKnown RBP8.49□□□□□ -1.05
CDKN3-210ENST00000556305 Q6ZNB5 142 aa8.49□□□□□ -1.05
CDKN3-210ENST00000556305 NLRP7Q8WX94 980 aa8.49□□□□□ -1.05
CDKN3-210ENST00000556305 EYA1Q99502 592 aa8.49□□□□□ -1.05
CDKN3-210ENST00000556305 ITGBL1O95965 494 aaPredicted RBP8.48□□□□□ -1.05
CDKN3-210ENST00000556305 HDGFP51858 240 aaKnown RBP8.48□□□□□ -1.05
CDKN3-210ENST00000556305 FLIIQ13045 1269 aa8.48□□□□□ -1.05
CDKN3-210ENST00000556305 FAM198AQ9UFP1 575 aa8.48□□□□□ -1.05
CDKN3-210ENST00000556305 PROX2Q3B8N5 592 aa8.46□□□□□ -1.06
CDKN3-210ENST00000556305 WNT2BQ93097 391 aa8.46□□□□□ -1.06
CDKN3-210ENST00000556305 ZBED2Q9BTP6 218 aa8.46□□□□□ -1.06
CDKN3-210ENST00000556305 TMEM134Q9H6X4 195 aa8.46□□□□□ -1.06
CDKN3-210ENST00000556305 DDX11L8A8MPP1 907 aa8.45□□□□□ -1.06
CDKN3-210ENST00000556305 NUTM1Q86Y26 1132 aa8.45□□□□□ -1.06
CDKN3-210ENST00000556305 KIAA1468Q9P260 1216 aa8.45□□□□□ -1.06
CDKN3-210ENST00000556305 RABGEF1Q9UJ41 708 aa8.45□□□□□ -1.06
CDKN3-210ENST00000556305 LCE2BO14633 110 aa8.44□□□□□ -1.06
CDKN3-210ENST00000556305 CD46P15529 392 aa8.43□□□□□ -1.06
CDKN3-210ENST00000556305 CLK2P49760 499 aaKnown RBP8.43□□□□□ -1.06
CDKN3-210ENST00000556305 RDH13Q8NBN7 331 aa8.43□□□□□ -1.06
CDKN3-210ENST00000556305 TBC1D2Q9BYX2 928 aa8.43□□□□□ -1.06
CDKN3-210ENST00000556305 NBPF3Q9H094 633 aa8.43□□□□□ -1.06
CDKN3-210ENST00000556305 SMAPO00193 183 aa8.42□□□□□ -1.06
CDKN3-210ENST00000556305 MYSM1Q5VVJ2 828 aa8.42□□□□□ -1.06
CDKN3-210ENST00000556305 MRPL50Q8N5N7 158 aaKnown RBP8.42□□□□□ -1.06
CDKN3-210ENST00000556305 POLR3EQ9NVU0 708 aa8.41□□□□□ -1.06
CDKN3-210ENST00000556305 FAM98CQ17RN3 349 aaKnown RBP8.4□□□□□ -1.06
CDKN3-210ENST00000556305 NECTIN2Q92692 538 aa8.4□□□□□ -1.06
CDKN3-210ENST00000556305 GOLGA8CPA6NN73 597 aa8.39□□□□□ -1.07
CDKN3-210ENST00000556305 USP46P62068 366 aa8.39□□□□□ -1.07
CDKN3-210ENST00000556305 LAPTM4BQ86VI4 370 aa8.39□□□□□ -1.07
CDKN3-210ENST00000556305 SLF2Q8IX21 1173 aa8.39□□□□□ -1.07
CDKN3-210ENST00000556305 ZMYND15Q9H091 742 aa8.39□□□□□ -1.07
CDKN3-210ENST00000556305 C3orf80F5H4A9 247 aa8.38□□□□□ -1.07
CDKN3-210ENST00000556305 RIC3Q7Z5B4 369 aa8.38□□□□□ -1.07
CDKN3-210ENST00000556305 SPIRE2Q8WWL2 714 aa8.38□□□□□ -1.07
CDKN3-210ENST00000556305 GJA5P36382 358 aa8.37□□□□□ -1.07
CDKN3-210ENST00000556305 LAPTM4AQ15012 233 aa8.37□□□□□ -1.07
CDKN3-210ENST00000556305 TUSC1Q2TAM9 212 aa8.37□□□□□ -1.07
CDKN3-210ENST00000556305 SWT1Q5T5J6 900 aaKnown RBP8.37□□□□□ -1.07
CDKN3-210ENST00000556305 SEPT9Q9UHD8 586 aaPredicted RBP8.37□□□□□ -1.07
CDKN3-210ENST00000556305 KDM4AO75164 1064 aa8.36□□□□□ -1.07
CDKN3-210ENST00000556305 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDKN3-210ENST00000556305 SPTLC1O15269 473 aa8.35□□□□□ -1.07
CDKN3-210ENST00000556305 GRIPAP1Q4V328 841 aa8.35□□□□□ -1.07
CDKN3-210ENST00000556305 PROCA1Q8NCQ7 364 aaPredicted RBP8.35□□□□□ -1.07
CDKN3-210ENST00000556305 UBTFP17480 764 aaKnown RBP8.34□□□□□ -1.07
CDKN3-210ENST00000556305 RSBN1LQ6PCB5 846 aaPredicted RBP8.34□□□□□ -1.07
CDKN3-210ENST00000556305 RNF40O75150 1001 aa8.33□□□□□ -1.08
CDKN3-210ENST00000556305 GCGRP47871 477 aa8.33□□□□□ -1.08
CDKN3-210ENST00000556305 TMEM259Q4ZIN3 620 aa8.33□□□□□ -1.08
CDKN3-210ENST00000556305 APBB1O00213 710 aa8.32□□□□□ -1.08
CDKN3-210ENST00000556305 KMT5BQ4FZB7 885 aa8.32□□□□□ -1.08
CDKN3-210ENST00000556305 TRAF7Q6Q0C0 670 aa8.32□□□□□ -1.08
CDKN3-210ENST00000556305 BANK1Q8NDB2 785 aa8.32□□□□□ -1.08
CDKN3-210ENST00000556305 LIMD1Q9UGP4 676 aa8.32□□□□□ -1.08
CDKN3-210ENST00000556305 MOXD2PA6NHM9 499 aa8.31□□□□□ -1.08
CDKN3-210ENST00000556305 RAD21O60216 631 aa8.31□□□□□ -1.08
CDKN3-210ENST00000556305 RFC5P40937 340 aa8.31□□□□□ -1.08
CDKN3-210ENST00000556305 MCM6Q14566 821 aa8.31□□□□□ -1.08
CDKN3-210ENST00000556305 PPP2R2DQ66LE6 453 aa8.31□□□□□ -1.08
CDKN3-210ENST00000556305 NYAP1Q6ZVC0 841 aa8.31□□□□□ -1.08
CDKN3-210ENST00000556305 SAMD7Q7Z3H4 446 aa8.31□□□□□ -1.08
CDKN3-210ENST00000556305 PRR14Q9BWN1 585 aa8.31□□□□□ -1.08
CDKN3-210ENST00000556305 SPDYE5A6NIY4 337 aa8.3□□□□□ -1.08
CDKN3-210ENST00000556305 NUTM2BA6NNL0 878 aaPredicted RBP8.3□□□□□ -1.08
CDKN3-210ENST00000556305 NUTM2EB1AL46 878 aaPredicted RBP8.3□□□□□ -1.08
CDKN3-210ENST00000556305 SUPT5HO00267 1087 aaKnown RBP8.3□□□□□ -1.08
CDKN3-210ENST00000556305 HOXA2O43364 376 aa8.3□□□□□ -1.08
CDKN3-210ENST00000556305 CSPP1Q1MSJ5 1256 aa8.3□□□□□ -1.08
CDKN3-210ENST00000556305 NUTM2DQ5VT03 806 aaPredicted RBP8.3□□□□□ -1.08
CDKN3-210ENST00000556305 PRPF38BQ5VTL8 546 aaKnown RBP8.3□□□□□ -1.08
CDKN3-210ENST00000556305 NUTM2AQ8IVF1 878 aaPredicted RBP8.3□□□□□ -1.08
CDKN3-210ENST00000556305 ANKK1Q8NFD2 765 aa8.3□□□□□ -1.08
CDKN3-210ENST00000556305 LRCH3Q96II8 777 aa8.3□□□□□ -1.08
CDKN3-210ENST00000556305 ZFRQ96KR1 1074 aaKnown RBP8.3□□□□□ -1.08
CDKN3-210ENST00000556305 PRM3Q9NNZ6 103 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms