RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 ZBED9Q6R2W3 1325 aa9.97□□□□□ -0.81
PCNX1-211ENST00000556272 ZFP91Q96JP5 570 aaPredicted RBP9.97□□□□□ -0.81
PCNX1-211ENST00000556272 MAST1Q9Y2H9 1570 aa9.97□□□□□ -0.81
PCNX1-211ENST00000556272 PREX2Q70Z35 1606 aa9.97□□□□□ -0.81
PCNX1-211ENST00000556272 HNRNPUQ00839 825 aaKnown RBP eCLIP9.97□□□□□ -0.81
PCNX1-211ENST00000556272 NBPF8Q3BBV2 869 aa9.96□□□□□ -0.81
PCNX1-211ENST00000556272 BARGINQ6ZT62 677 aa9.96□□□□□ -0.81
PCNX1-211ENST00000556272 ZNF644Q9H582 1327 aaPredicted RBP9.96□□□□□ -0.82
PCNX1-211ENST00000556272 C9orf84Q5VXU9 1444 aa9.96□□□□□ -0.82
PCNX1-211ENST00000556272 KIF7Q2M1P5 1343 aa9.95□□□□□ -0.82
PCNX1-211ENST00000556272 IRX6P78412 446 aaPredicted RBP9.95□□□□□ -0.82
PCNX1-211ENST00000556272 KTN1Q86UP2 1357 aaKnown RBP9.95□□□□□ -0.82
PCNX1-211ENST00000556272 ATP10BO94823 1461 aa9.95□□□□□ -0.82
PCNX1-211ENST00000556272 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
PCNX1-211ENST00000556272 LAMC1P11047 1609 aa9.95□□□□□ -0.82
PCNX1-211ENST00000556272 CERS3Q8IU89 383 aa9.94□□□□□ -0.82
PCNX1-211ENST00000556272 ZNF777Q9ULD5 760 aaPredicted RBP9.94□□□□□ -0.82
PCNX1-211ENST00000556272 BCORL1Q5H9F3 1711 aa9.94□□□□□ -0.82
PCNX1-211ENST00000556272 TESPA1A2RU30 521 aaPredicted RBP9.94□□□□□ -0.82
PCNX1-211ENST00000556272 E9PCH4 1651 aa9.94□□□□□ -0.82
PCNX1-211ENST00000556272 ANP32EQ9BTT0 268 aa9.93□□□□□ -0.82
PCNX1-211ENST00000556272 FAM117AQ9C073 453 aa9.93□□□□□ -0.82
PCNX1-211ENST00000556272 UNC13BO14795 1591 aa9.93□□□□□ -0.82
PCNX1-211ENST00000556272 USP47Q96K76 1375 aa9.93□□□□□ -0.82
PCNX1-211ENST00000556272 ZNF592Q92610 1267 aa9.93□□□□□ -0.82
PCNX1-211ENST00000556272 DHX29Q7Z478 1369 aaKnown RBP9.93□□□□□ -0.82
PCNX1-211ENST00000556272 PLEKHD1A6NEE1 506 aa9.93□□□□□ -0.82
PCNX1-211ENST00000556272 BCL11BQ9C0K0 894 aaPredicted RBP9.93□□□□□ -0.82
PCNX1-211ENST00000556272 CCDC141Q6ZP82 1450 aa9.92□□□□□ -0.82
PCNX1-211ENST00000556272 A6NJR5 290 aa9.92□□□□□ -0.82
PCNX1-211ENST00000556272 C11orf95C9JLR9 678 aaPredicted RBP9.92□□□□□ -0.82
PCNX1-211ENST00000556272 PLXNC1O60486 1568 aa9.92□□□□□ -0.82
PCNX1-211ENST00000556272 CDC42BPBQ9Y5S2 1711 aa9.92□□□□□ -0.82
PCNX1-211ENST00000556272 TMED8Q6PL24 325 aaPredicted RBP9.92□□□□□ -0.82
PCNX1-211ENST00000556272 SAMD9LQ8IVG5 1584 aa9.91□□□□□ -0.82
PCNX1-211ENST00000556272 FLIIQ13045 1269 aa9.9□□□□□ -0.82
PCNX1-211ENST00000556272 SMG6Q86US8 1419 aaKnown RBP9.9□□□□□ -0.82
PCNX1-211ENST00000556272 CCDC125Q86Z20 511 aa9.9□□□□□ -0.82
PCNX1-211ENST00000556272 MRS2Q9HD23 443 aa9.9□□□□□ -0.82
PCNX1-211ENST00000556272 PPP4R2Q9NY27 417 aa9.9□□□□□ -0.82
PCNX1-211ENST00000556272 PLEKHH2Q8IVE3 1493 aa9.9□□□□□ -0.82
PCNX1-211ENST00000556272 ABCC2Q92887 1545 aa9.9□□□□□ -0.82
PCNX1-211ENST00000556272 RBM19Q9Y4C8 960 aaKnown RBP9.89□□□□□ -0.83
PCNX1-211ENST00000556272 PLCD3Q8N3E9 789 aa9.89□□□□□ -0.83
PCNX1-211ENST00000556272 TRPM1Q7Z4N2 1603 aa9.89□□□□□ -0.83
PCNX1-211ENST00000556272 AK7Q96M32 723 aa9.89□□□□□ -0.83
PCNX1-211ENST00000556272 IQGAP3Q86VI3 1631 aa9.88□□□□□ -0.83
PCNX1-211ENST00000556272 EIF2AK4Q9P2K8 1649 aaKnown RBP9.88□□□□□ -0.83
PCNX1-211ENST00000556272 FAM135AQ9P2D6 1515 aa9.88□□□□□ -0.83
PCNX1-211ENST00000556272 FANCIQ9NVI1 1328 aa9.88□□□□□ -0.83
PCNX1-211ENST00000556272 ZMYM4Q5VZL5 1548 aa9.88□□□□□ -0.83
PCNX1-211ENST00000556272 NUP155O75694 1391 aa9.88□□□□□ -0.83
PCNX1-211ENST00000556272 KIF15Q9NS87 1388 aa9.88□□□□□ -0.83
PCNX1-211ENST00000556272 UNCXA6NJT0 531 aa9.88□□□□□ -0.83
PCNX1-211ENST00000556272 TSPY4P0CV99 314 aa9.88□□□□□ -0.83
PCNX1-211ENST00000556272 TSPY10P0CW01 314 aa9.88□□□□□ -0.83
PCNX1-211ENST00000556272 MYO5CQ9NQX4 1742 aa9.87□□□□□ -0.83
PCNX1-211ENST00000556272 PLEKHG3A1L390 1219 aa9.87□□□□□ -0.83
PCNX1-211ENST00000556272 ATP10AO60312 1499 aa9.86□□□□□ -0.83
PCNX1-211ENST00000556272 MAGI2Q86UL8 1455 aa9.86□□□□□ -0.83
PCNX1-211ENST00000556272 STK25O00506 426 aa9.86□□□□□ -0.83
PCNX1-211ENST00000556272 BCCIPQ9P287 314 aaKnown RBP eCLIP9.86□□□□□ -0.83
PCNX1-211ENST00000556272 INSRP06213 1382 aa9.86□□□□□ -0.83
PCNX1-211ENST00000556272 UHRF1BP1LA0JNW5 1464 aa9.86□□□□□ -0.83
PCNX1-211ENST00000556272 RNF123Q5XPI4 1314 aa9.85□□□□□ -0.83
PCNX1-211ENST00000556272 ILDR1Q86SU0 546 aaPredicted RBP9.85□□□□□ -0.83
PCNX1-211ENST00000556272 GPRASP1Q5JY77 1395 aa9.85□□□□□ -0.83
PCNX1-211ENST00000556272 ZCCHC11Q5TAX3 1644 aaKnown RBP9.85□□□□□ -0.83
PCNX1-211ENST00000556272 CCDC184Q52MB2 194 aa9.85□□□□□ -0.83
PCNX1-211ENST00000556272 BRD4O60885 1362 aaPredicted RBP9.85□□□□□ -0.83
PCNX1-211ENST00000556272 PDE4DQ08499 809 aa9.84□□□□□ -0.83
PCNX1-211ENST00000556272 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.84□□□□□ -0.83
PCNX1-211ENST00000556272 DUOX2Q9NRD8 1548 aa9.84□□□□□ -0.83
PCNX1-211ENST00000556272 LRPPRCP42704 1394 aaKnown RBP9.83□□□□□ -0.84
PCNX1-211ENST00000556272 PRDM15P57071 1507 aaPredicted RBP9.83□□□□□ -0.84
PCNX1-211ENST00000556272 RALBP1Q15311 655 aa9.83□□□□□ -0.84
PCNX1-211ENST00000556272 FAM9BQ8IZU0 186 aa9.83□□□□□ -0.84
PCNX1-211ENST00000556272 IGSF5Q9NSI5 407 aa9.83□□□□□ -0.84
PCNX1-211ENST00000556272 PRAG1Q86YV5 1406 aa9.83□□□□□ -0.84
PCNX1-211ENST00000556272 ERBINQ96RT1 1412 aa9.83□□□□□ -0.84
PCNX1-211ENST00000556272 TTC37Q6PGP7 1564 aa9.82□□□□□ -0.84
PCNX1-211ENST00000556272 RNF17Q9BXT8 1623 aaKnown RBP9.82□□□□□ -0.84
PCNX1-211ENST00000556272 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.82□□□□□ -0.84
PCNX1-211ENST00000556272 SYCP2Q9BX26 1530 aa9.82□□□□□ -0.84
PCNX1-211ENST00000556272 NUDCQ9Y266 331 aa9.82□□□□□ -0.84
PCNX1-211ENST00000556272 CCDC144AA2RUR9 1427 aa9.82□□□□□ -0.84
PCNX1-211ENST00000556272 WASHC2CQ9Y4E1 1318 aa9.82□□□□□ -0.84
PCNX1-211ENST00000556272 ARAP3Q8WWN8 1544 aa9.81□□□□□ -0.84
PCNX1-211ENST00000556272 TRIM66O15016 1216 aa9.81□□□□□ -0.84
PCNX1-211ENST00000556272 TICAM2Q86XR7 235 aa9.81□□□□□ -0.84
PCNX1-211ENST00000556272 ARHGEF1Q92888 912 aaKnown RBP9.81□□□□□ -0.84
PCNX1-211ENST00000556272 CARD11Q9BXL7 1154 aa9.81□□□□□ -0.84
PCNX1-211ENST00000556272 CYB5RLQ6IPT4 315 aa9.81□□□□□ -0.84
PCNX1-211ENST00000556272 ARHGAP5Q13017 1502 aa9.81□□□□□ -0.84
PCNX1-211ENST00000556272 MYBBP1AQ9BQG0 1328 aaKnown RBP9.81□□□□□ -0.84
PCNX1-211ENST00000556272 KDM4AO75164 1064 aa9.8□□□□□ -0.84
PCNX1-211ENST00000556272 ARIH1Q9Y4X5 557 aaPredicted RBP9.8□□□□□ -0.84
PCNX1-211ENST00000556272 COL17A1Q9UMD9 1497 aaPredicted RBP9.8□□□□□ -0.84
PCNX1-211ENST00000556272 PNISRQ8TF01 805 aaKnown RBP9.79□□□□□ -0.84
PCNX1-211ENST00000556272 NEURL4Q96JN8 1562 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms