RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 L3MBTL2Q969R5 705 aa16.64■□□□□ 0.25
GABRB3-210ENST00000556166 SLIT1O75093 1534 aa16.64■□□□□ 0.25
GABRB3-210ENST00000556166 KDM5AP29375 1690 aaKnown RBP16.64■□□□□ 0.25
GABRB3-210ENST00000556166 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
GABRB3-210ENST00000556166 MYO5BQ9ULV0 1848 aa16.63■□□□□ 0.25
GABRB3-210ENST00000556166 NEURL4Q96JN8 1562 aa16.63■□□□□ 0.25
GABRB3-210ENST00000556166 DCAF11Q8TEB1 546 aa16.62■□□□□ 0.25
GABRB3-210ENST00000556166 KDM2AQ9Y2K7 1162 aa16.62■□□□□ 0.25
GABRB3-210ENST00000556166 EID1Q9Y6B2 187 aa16.62■□□□□ 0.25
GABRB3-210ENST00000556166 KIF1BO60333 1816 aa16.62■□□□□ 0.25
GABRB3-210ENST00000556166 ADGRF5Q8IZF2 1346 aa16.62■□□□□ 0.25
GABRB3-210ENST00000556166 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.61■□□□□ 0.25
GABRB3-210ENST00000556166 NEXMIFQ5QGS0 1516 aa16.61■□□□□ 0.25
GABRB3-210ENST00000556166 HDGFP51858 240 aaKnown RBP16.6■□□□□ 0.25
GABRB3-210ENST00000556166 SCAF11Q99590 1463 aaKnown RBP16.59■□□□□ 0.25
GABRB3-210ENST00000556166 VGFO15240 615 aaPredicted RBP16.59■□□□□ 0.25
GABRB3-210ENST00000556166 PPP1R15AO75807 674 aaPredicted RBP16.58■□□□□ 0.24
GABRB3-210ENST00000556166 PLEKHG1Q9ULL1 1385 aa16.56■□□□□ 0.24
GABRB3-210ENST00000556166 STRCQ7RTU9 1775 aa16.56■□□□□ 0.24
GABRB3-210ENST00000556166 TONSLQ96HA7 1378 aa16.55■□□□□ 0.24
GABRB3-210ENST00000556166 NPHP4O75161 1426 aaPredicted RBP16.55■□□□□ 0.24
GABRB3-210ENST00000556166 MED14O60244 1454 aa16.55■□□□□ 0.24
GABRB3-210ENST00000556166 SLC26A8Q96RN1 970 aa16.55■□□□□ 0.24
GABRB3-210ENST00000556166 STAC3Q96MF2 364 aa16.54■□□□□ 0.24
GABRB3-210ENST00000556166 NBPF8Q3BBV2 869 aa16.53■□□□□ 0.24
GABRB3-210ENST00000556166 TIMELESSQ9UNS1 1208 aa16.53■□□□□ 0.24
GABRB3-210ENST00000556166 NRXN1Q9ULB1 1477 aa16.53■□□□□ 0.24
GABRB3-210ENST00000556166 PPLO60437 1756 aa16.53■□□□□ 0.24
GABRB3-210ENST00000556166 BCANQ96GW7 911 aa16.52■□□□□ 0.24
GABRB3-210ENST00000556166 ADAMTS13Q76LX8 1427 aa16.52■□□□□ 0.24
GABRB3-210ENST00000556166 MYOM2P54296 1465 aa16.52■□□□□ 0.24
GABRB3-210ENST00000556166 IFT172Q9UG01 1749 aa16.51■□□□□ 0.23
GABRB3-210ENST00000556166 CFAP70Q5T0N1 1121 aa16.51■□□□□ 0.23
GABRB3-210ENST00000556166 C14orf93Q9H972 538 aaKnown RBP16.51■□□□□ 0.23
GABRB3-210ENST00000556166 TBX22Q9Y458 520 aa16.51■□□□□ 0.23
GABRB3-210ENST00000556166 PIK3C2GO75747 1445 aa16.5■□□□□ 0.23
GABRB3-210ENST00000556166 PRAG1Q86YV5 1406 aa16.49■□□□□ 0.23
GABRB3-210ENST00000556166 DMRT2Q9Y5R5 561 aa16.49■□□□□ 0.23
GABRB3-210ENST00000556166 METP08581 1390 aa16.48■□□□□ 0.23
GABRB3-210ENST00000556166 NRXN3Q9Y4C0 1643 aa16.48■□□□□ 0.23
GABRB3-210ENST00000556166 SETBP1Q9Y6X0 1596 aa16.48■□□□□ 0.23
GABRB3-210ENST00000556166 POLR1AO95602 1720 aaPredicted RBP16.47■□□□□ 0.23
GABRB3-210ENST00000556166 NBPF1Q3BBV0 1214 aa16.47■□□□□ 0.23
GABRB3-210ENST00000556166 TMEM132EQ6IEE7 984 aa16.47■□□□□ 0.23
GABRB3-210ENST00000556166 ALKQ9UM73 1620 aa16.45■□□□□ 0.22
GABRB3-210ENST00000556166 IQGAP1P46940 1657 aa16.45■□□□□ 0.22
GABRB3-210ENST00000556166 PTPRUQ92729 1446 aa16.43■□□□□ 0.22
GABRB3-210ENST00000556166 ZNF335Q9H4Z2 1342 aaPredicted RBP16.42■□□□□ 0.22
GABRB3-210ENST00000556166 KCNA6P17658 529 aa16.4■□□□□ 0.22
GABRB3-210ENST00000556166 AMOTL2Q9Y2J4 779 aa16.4■□□□□ 0.22
GABRB3-210ENST00000556166 ASXL1Q8IXJ9 1541 aa16.4■□□□□ 0.22
GABRB3-210ENST00000556166 STK26Q9P289 416 aa16.39■□□□□ 0.21
GABRB3-210ENST00000556166 PIK3R4Q99570 1358 aa16.39■□□□□ 0.21
GABRB3-210ENST00000556166 ADGRB1O14514 1584 aa16.38■□□□□ 0.21
GABRB3-210ENST00000556166 SETD1AO15047 1707 aaKnown RBP16.38■□□□□ 0.21
GABRB3-210ENST00000556166 DIP2AQ14689 1571 aa16.38■□□□□ 0.21
GABRB3-210ENST00000556166 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
GABRB3-210ENST00000556166 YTHDC2Q9H6S0 1430 aaKnown RBP16.35■□□□□ 0.21
GABRB3-210ENST00000556166 ROCK2O75116 1388 aaKnown RBP16.35■□□□□ 0.21
GABRB3-210ENST00000556166 ABCC11Q96J66 1382 aa16.35■□□□□ 0.21
GABRB3-210ENST00000556166 RBM33Q96EV2 1170 aaKnown RBP16.34■□□□□ 0.21
GABRB3-210ENST00000556166 TRAK1Q9UPV9 953 aa16.34■□□□□ 0.21
GABRB3-210ENST00000556166 GPRASP1Q5JY77 1395 aa16.34■□□□□ 0.21
GABRB3-210ENST00000556166 ROBO2Q9HCK4 1378 aa16.34■□□□□ 0.21
GABRB3-210ENST00000556166 RALGAPBQ86X10 1494 aa16.34■□□□□ 0.21
GABRB3-210ENST00000556166 TRPM1Q7Z4N2 1603 aa16.34■□□□□ 0.21
GABRB3-210ENST00000556166 WAPLQ7Z5K2 1190 aa16.33■□□□□ 0.2
GABRB3-210ENST00000556166 CARD11Q9BXL7 1154 aa16.33■□□□□ 0.2
GABRB3-210ENST00000556166 LAMC1P11047 1609 aa16.32■□□□□ 0.2
GABRB3-210ENST00000556166 KIAA1210Q9ULL0 1709 aa16.32■□□□□ 0.2
GABRB3-210ENST00000556166 STRCP1A6NGW2 1772 aa16.32■□□□□ 0.2
GABRB3-210ENST00000556166 PROSER2Q86WR7 435 aaPredicted RBP16.31■□□□□ 0.2
GABRB3-210ENST00000556166 SIRT1Q96EB6 747 aa16.31■□□□□ 0.2
GABRB3-210ENST00000556166 CHD2O14647 1828 aaKnown RBP16.31■□□□□ 0.2
GABRB3-210ENST00000556166 LTBP4Q8N2S1 1624 aa16.3■□□□□ 0.2
GABRB3-210ENST00000556166 TECPR2O15040 1411 aa16.3■□□□□ 0.2
GABRB3-210ENST00000556166 PLEKHH1Q9ULM0 1364 aa16.3■□□□□ 0.2
GABRB3-210ENST00000556166 NWD1Q149M9 1564 aa16.3■□□□□ 0.2
GABRB3-210ENST00000556166 PRAM1Q96QH2 718 aa16.3■□□□□ 0.2
GABRB3-210ENST00000556166 ZEB1P37275 1124 aaPredicted RBP16.29■□□□□ 0.2
GABRB3-210ENST00000556166 XRN1Q8IZH2 1706 aaKnown RBP16.29■□□□□ 0.2
GABRB3-210ENST00000556166 SAFB2Q14151 953 aaKnown RBP eCLIP16.27■□□□□ 0.2
GABRB3-210ENST00000556166 LRRC7Q96NW7 1537 aa16.27■□□□□ 0.2
GABRB3-210ENST00000556166 PTCH1Q13635 1447 aa16.27■□□□□ 0.19
GABRB3-210ENST00000556166 TMEM94Q12767 1356 aa16.27■□□□□ 0.19
GABRB3-210ENST00000556166 NKTRP30414 1462 aaKnown RBP16.26■□□□□ 0.19
GABRB3-210ENST00000556166 FAM135BQ49AJ0 1406 aa16.25■□□□□ 0.19
GABRB3-210ENST00000556166 POGKQ9P215 609 aa16.25■□□□□ 0.19
GABRB3-210ENST00000556166 DLC1Q96QB1 1528 aa16.24■□□□□ 0.19
GABRB3-210ENST00000556166 CPS1P31327 1500 aa16.24■□□□□ 0.19
GABRB3-210ENST00000556166 ST20-MTHFSA0A0A6YYL1 179 aa16.23■□□□□ 0.19
GABRB3-210ENST00000556166 USP47Q96K76 1375 aa16.22■□□□□ 0.19
GABRB3-210ENST00000556166 CENPJQ9HC77 1338 aaPredicted RBP16.22■□□□□ 0.19
GABRB3-210ENST00000556166 CERKQ8TCT0 537 aa16.21■□□□□ 0.19
GABRB3-210ENST00000556166 MINK1Q8N4C8 1332 aaPredicted RBP16.21■□□□□ 0.19
GABRB3-210ENST00000556166 HSPA5P11021 654 aaKnown RBP16.21■□□□□ 0.18
GABRB3-210ENST00000556166 TESK2Q96S53 571 aa16.21■□□□□ 0.18
GABRB3-210ENST00000556166 HIRIP3Q9BW71 556 aaPredicted RBP16.21■□□□□ 0.18
GABRB3-210ENST00000556166 KNDC1Q76NI1 1749 aa16.2■□□□□ 0.18
GABRB3-210ENST00000556166 NCOA3Q9Y6Q9 1424 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms