RNA–Protein interactions for RNA: ENST00000556116.1

LINC00639-203, long intergenic non-protein coding RNA 639, humanhuman

TSL 4

Gene LINC00639, Length 552 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-203ENST00000556116 ROCK1Q13464 1354 aa13.41□□□□□ -0.26
LINC00639-203ENST00000556116 STAG3Q9UJ98 1225 aa13.4□□□□□ -0.26
LINC00639-203ENST00000556116 NWD1Q149M9 1564 aa13.4□□□□□ -0.26
LINC00639-203ENST00000556116 EID1Q9Y6B2 187 aa13.39□□□□□ -0.27
LINC00639-203ENST00000556116 CHD2O14647 1828 aaKnown RBP13.38□□□□□ -0.27
LINC00639-203ENST00000556116 TMEM94Q12767 1356 aa13.37□□□□□ -0.27
LINC00639-203ENST00000556116 NUTM2DQ5VT03 806 aaPredicted RBP13.37□□□□□ -0.27
LINC00639-203ENST00000556116 SLC52A1Q9NWF4 448 aa13.37□□□□□ -0.27
LINC00639-203ENST00000556116 RIMS2Q9UQ26 1411 aa13.37□□□□□ -0.27
LINC00639-203ENST00000556116 SOCS7O14512 581 aa13.35□□□□□ -0.27
LINC00639-203ENST00000556116 ROBO1Q9Y6N7 1651 aa13.34□□□□□ -0.27
LINC00639-203ENST00000556116 NUP155O75694 1391 aa13.34□□□□□ -0.27
LINC00639-203ENST00000556116 SPHKAPQ2M3C7 1700 aa13.34□□□□□ -0.27
LINC00639-203ENST00000556116 ADAMTS13Q76LX8 1427 aa13.34□□□□□ -0.27
LINC00639-203ENST00000556116 RRBP1Q9P2E9 1410 aaKnown RBP13.34□□□□□ -0.27
LINC00639-203ENST00000556116 KCNA6P17658 529 aa13.34□□□□□ -0.27
LINC00639-203ENST00000556116 PLEKHG1Q9ULL1 1385 aa13.33□□□□□ -0.27
LINC00639-203ENST00000556116 NRXN3Q9Y4C0 1643 aa13.33□□□□□ -0.28
LINC00639-203ENST00000556116 NKTRP30414 1462 aaKnown RBP13.31□□□□□ -0.28
LINC00639-203ENST00000556116 CHGAP10645 457 aaKnown RBP13.31□□□□□ -0.28
LINC00639-203ENST00000556116 CLTCL1P53675 1640 aa13.31□□□□□ -0.28
LINC00639-203ENST00000556116 NAIPQ13075 1403 aa13.3□□□□□ -0.28
LINC00639-203ENST00000556116 PTPRUQ92729 1446 aa13.3□□□□□ -0.28
LINC00639-203ENST00000556116 PROSER2Q86WR7 435 aaPredicted RBP13.3□□□□□ -0.28
LINC00639-203ENST00000556116 FAM135BQ49AJ0 1406 aa13.29□□□□□ -0.28
LINC00639-203ENST00000556116 BCANQ96GW7 911 aa13.28□□□□□ -0.28
LINC00639-203ENST00000556116 RGS17Q9UGC6 210 aaPredicted RBP13.28□□□□□ -0.28
LINC00639-203ENST00000556116 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.27□□□□□ -0.29
LINC00639-203ENST00000556116 PPP1R15AO75807 674 aaPredicted RBP13.26□□□□□ -0.29
LINC00639-203ENST00000556116 XRN1Q8IZH2 1706 aaKnown RBP13.25□□□□□ -0.29
LINC00639-203ENST00000556116 DIP2AQ14689 1571 aa13.25□□□□□ -0.29
LINC00639-203ENST00000556116 NEXMIFQ5QGS0 1516 aa13.25□□□□□ -0.29
LINC00639-203ENST00000556116 TBX22Q9Y458 520 aa13.25□□□□□ -0.29
LINC00639-203ENST00000556116 TRPM2O94759 1503 aa13.24□□□□□ -0.29
LINC00639-203ENST00000556116 PHLPP1O60346 1717 aa13.24□□□□□ -0.29
LINC00639-203ENST00000556116 SETBP1Q9Y6X0 1596 aa13.24□□□□□ -0.29
LINC00639-203ENST00000556116 SETD1AO15047 1707 aaKnown RBP13.23□□□□□ -0.29
LINC00639-203ENST00000556116 COL16A1Q07092 1604 aaPredicted RBP13.23□□□□□ -0.29
LINC00639-203ENST00000556116 METP08581 1390 aa13.22□□□□□ -0.29
LINC00639-203ENST00000556116 MSH6P52701 1360 aa13.22□□□□□ -0.29
LINC00639-203ENST00000556116 KIF1BO60333 1816 aa13.21□□□□□ -0.29
LINC00639-203ENST00000556116 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC00639-203ENST00000556116 HFM1A2PYH4 1435 aa13.21□□□□□ -0.3
LINC00639-203ENST00000556116 SLAIN2Q9P270 581 aa13.2□□□□□ -0.3
LINC00639-203ENST00000556116 AMOTL2Q9Y2J4 779 aa13.19□□□□□ -0.3
LINC00639-203ENST00000556116 NALCNQ8IZF0 1738 aa13.19□□□□□ -0.3
LINC00639-203ENST00000556116 PIK3R4Q99570 1358 aa13.19□□□□□ -0.3
LINC00639-203ENST00000556116 HDGFP51858 240 aaKnown RBP13.18□□□□□ -0.3
LINC00639-203ENST00000556116 FOXD1Q16676 465 aa13.18□□□□□ -0.3
LINC00639-203ENST00000556116 LRP6O75581 1613 aa13.17□□□□□ -0.3
LINC00639-203ENST00000556116 ZNF326Q5BKZ1 582 aaKnown RBP13.17□□□□□ -0.3
LINC00639-203ENST00000556116 POTEAQ6S8J7 498 aa13.17□□□□□ -0.3
LINC00639-203ENST00000556116 PPLO60437 1756 aa13.17□□□□□ -0.3
LINC00639-203ENST00000556116 NCOA3Q9Y6Q9 1424 aa13.16□□□□□ -0.3
LINC00639-203ENST00000556116 AHDC1Q5TGY3 1603 aaPredicted RBP13.16□□□□□ -0.3
LINC00639-203ENST00000556116 TRIM52Q96A61 297 aa13.14□□□□□ -0.31
LINC00639-203ENST00000556116 C19orf44Q9H6X5 657 aa13.14□□□□□ -0.31
LINC00639-203ENST00000556116 MST1RQ04912 1400 aa13.13□□□□□ -0.31
LINC00639-203ENST00000556116 BRINP3Q76B58 766 aa13.13□□□□□ -0.31
LINC00639-203ENST00000556116 C14orf37Q86TY3 774 aa13.13□□□□□ -0.31
LINC00639-203ENST00000556116 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
LINC00639-203ENST00000556116 SHPRHQ149N8 1683 aa13.12□□□□□ -0.31
LINC00639-203ENST00000556116 DDX17Q92841 729 aaKnown RBP13.12□□□□□ -0.31
LINC00639-203ENST00000556116 ASXL1Q8IXJ9 1541 aa13.12□□□□□ -0.31
LINC00639-203ENST00000556116 IFT172Q9UG01 1749 aa13.11□□□□□ -0.31
LINC00639-203ENST00000556116 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
LINC00639-203ENST00000556116 ROBO2Q9HCK4 1378 aa13.1□□□□□ -0.31
LINC00639-203ENST00000556116 JCADQ9P266 1359 aa13.1□□□□□ -0.31
LINC00639-203ENST00000556116 CADPS2Q86UW7 1296 aa13.1□□□□□ -0.31
LINC00639-203ENST00000556116 ADGRL3Q9HAR2 1447 aa13.1□□□□□ -0.31
LINC00639-203ENST00000556116 ATF3P18847 181 aa13.09□□□□□ -0.31
LINC00639-203ENST00000556116 DCCP43146 1447 aa13.09□□□□□ -0.31
LINC00639-203ENST00000556116 SPATA31E1Q6ZUB1 1445 aa13.08□□□□□ -0.32
LINC00639-203ENST00000556116 ADGRF5Q8IZF2 1346 aa13.07□□□□□ -0.32
LINC00639-203ENST00000556116 PTCH1Q13635 1447 aa13.05□□□□□ -0.32
LINC00639-203ENST00000556116 MPHOSPH9Q99550 1183 aa13.05□□□□□ -0.32
LINC00639-203ENST00000556116 PRAG1Q86YV5 1406 aa13.05□□□□□ -0.32
LINC00639-203ENST00000556116 C1orf167Q5SNV9 1468 aa13.04□□□□□ -0.32
LINC00639-203ENST00000556116 LAMC1P11047 1609 aa13.04□□□□□ -0.32
LINC00639-203ENST00000556116 SETD5Q9C0A6 1442 aa13.04□□□□□ -0.32
LINC00639-203ENST00000556116 RGL3Q3MIN7 710 aa13.03□□□□□ -0.32
LINC00639-203ENST00000556116 VGFO15240 615 aaPredicted RBP13.02□□□□□ -0.33
LINC00639-203ENST00000556116 ORAI2Q96SN7 254 aa13.02□□□□□ -0.33
LINC00639-203ENST00000556116 SPATA31A6Q5VVP1 1343 aa13.02□□□□□ -0.33
LINC00639-203ENST00000556116 RPGRIP1LQ68CZ1 1315 aa13.02□□□□□ -0.33
LINC00639-203ENST00000556116 PLEKHH1Q9ULM0 1364 aa13.02□□□□□ -0.33
LINC00639-203ENST00000556116 CCDC144AA2RUR9 1427 aa13.02□□□□□ -0.33
LINC00639-203ENST00000556116 NUTM2BA6NNL0 878 aaPredicted RBP13.01□□□□□ -0.33
LINC00639-203ENST00000556116 NUTM2EB1AL46 878 aaPredicted RBP13.01□□□□□ -0.33
LINC00639-203ENST00000556116 NUTM2AQ8IVF1 878 aaPredicted RBP13.01□□□□□ -0.33
LINC00639-203ENST00000556116 PNPLA6Q8IY17 1366 aa13□□□□□ -0.33
LINC00639-203ENST00000556116 TMEM132EQ6IEE7 984 aa13□□□□□ -0.33
LINC00639-203ENST00000556116 KNDC1Q76NI1 1749 aa12.99□□□□□ -0.33
LINC00639-203ENST00000556116 PIK3C2GO75747 1445 aa12.99□□□□□ -0.33
LINC00639-203ENST00000556116 WAPLQ7Z5K2 1190 aa12.99□□□□□ -0.33
LINC00639-203ENST00000556116 RAB3GAP2Q9H2M9 1393 aa12.98□□□□□ -0.33
LINC00639-203ENST00000556116 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
LINC00639-203ENST00000556116 RGPD8O14715 1765 aaPredicted RBP12.97□□□□□ -0.33
LINC00639-203ENST00000556116 STK26Q9P289 416 aa12.97□□□□□ -0.33
LINC00639-203ENST00000556116 TECPR2O15040 1411 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms