RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 CLCN1P35523 988 aa13.17□□□□□ -0.3
LINC00871-202ENST00000556071 BRPF1P55201 1214 aaPredicted RBP13.17□□□□□ -0.3
LINC00871-202ENST00000556071 RNF166Q96A37 237 aaPredicted RBP13.17□□□□□ -0.3
LINC00871-202ENST00000556071 TMUB1Q9BVT8 246 aa13.17□□□□□ -0.3
LINC00871-202ENST00000556071 GPBP1L1Q9HC44 474 aaPredicted RBP13.17□□□□□ -0.3
LINC00871-202ENST00000556071 GPCPD1Q9NPB8 672 aa13.17□□□□□ -0.3
LINC00871-202ENST00000556071 DAXXQ9UER7 740 aaPredicted RBP13.16□□□□□ -0.3
LINC00871-202ENST00000556071 NEUROD2Q15784 382 aa13.15□□□□□ -0.3
LINC00871-202ENST00000556071 GIGYF2Q6Y7W6 1299 aaKnown RBP13.15□□□□□ -0.3
LINC00871-202ENST00000556071 ANKK1Q8NFD2 765 aa13.15□□□□□ -0.3
LINC00871-202ENST00000556071 WNT2BQ93097 391 aa13.15□□□□□ -0.3
LINC00871-202ENST00000556071 HDGFP51858 240 aaKnown RBP13.14□□□□□ -0.31
LINC00871-202ENST00000556071 LRCH3Q96II8 777 aa13.13□□□□□ -0.31
LINC00871-202ENST00000556071 MYT1LQ9UL68 1186 aa13.13□□□□□ -0.31
LINC00871-202ENST00000556071 KCTD12Q96CX2 325 aaKnown RBP13.12□□□□□ -0.31
LINC00871-202ENST00000556071 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.12□□□□□ -0.31
LINC00871-202ENST00000556071 RNF40O75150 1001 aa13.11□□□□□ -0.31
LINC00871-202ENST00000556071 BCAMP50895 628 aa13.11□□□□□ -0.31
LINC00871-202ENST00000556071 KDM4CQ9H3R0 1056 aa13.11□□□□□ -0.31
LINC00871-202ENST00000556071 FAM217BQ9NTX9 383 aaPredicted RBP13.11□□□□□ -0.31
LINC00871-202ENST00000556071 SOWAHBA6NEL2 793 aa13.1□□□□□ -0.31
LINC00871-202ENST00000556071 DDX11L8A8MPP1 907 aa13.09□□□□□ -0.31
LINC00871-202ENST00000556071 MS4A1P11836 297 aa13.08□□□□□ -0.32
LINC00871-202ENST00000556071 SSTR3P32745 418 aaPredicted RBP13.08□□□□□ -0.32
LINC00871-202ENST00000556071 SLF2Q8IX21 1173 aa13.08□□□□□ -0.32
LINC00871-202ENST00000556071 THSD4Q6ZMP0 1018 aa13.07□□□□□ -0.32
LINC00871-202ENST00000556071 SULF1Q8IWU6 871 aa13.07□□□□□ -0.32
LINC00871-202ENST00000556071 SLC10A3P09131 477 aa13.06□□□□□ -0.32
LINC00871-202ENST00000556071 SLC4A3P48751 1232 aa13.06□□□□□ -0.32
LINC00871-202ENST00000556071 RDH13Q8NBN7 331 aa13.05□□□□□ -0.32
LINC00871-202ENST00000556071 HPS5Q9UPZ3 1129 aa13.05□□□□□ -0.32
LINC00871-202ENST00000556071 CD46P15529 392 aa13.03□□□□□ -0.32
LINC00871-202ENST00000556071 TSR3Q9UJK0 312 aaKnown RBP13.02□□□□□ -0.33
LINC00871-202ENST00000556071 PPP4CP60510 307 aa13□□□□□ -0.33
LINC00871-202ENST00000556071 RSPH4AQ5TD94 716 aa13□□□□□ -0.33
LINC00871-202ENST00000556071 FAM117AQ9C073 453 aa13□□□□□ -0.33
LINC00871-202ENST00000556071 WBP1LQ9NX94 342 aa13□□□□□ -0.33
LINC00871-202ENST00000556071 PTPN5P54829 565 aa12.99□□□□□ -0.33
LINC00871-202ENST00000556071 BEGAINQ9BUH8 593 aa12.99□□□□□ -0.33
LINC00871-202ENST00000556071 CFHP08603 1231 aa12.98□□□□□ -0.33
LINC00871-202ENST00000556071 NECTIN2Q92692 538 aa12.96□□□□□ -0.33
LINC00871-202ENST00000556071 GCGRP47871 477 aa12.95□□□□□ -0.34
LINC00871-202ENST00000556071 APLP1P51693 650 aa12.94□□□□□ -0.34
LINC00871-202ENST00000556071 DDRGK1Q96HY6 314 aa12.94□□□□□ -0.34
LINC00871-202ENST00000556071 PLEKHG3A1L390 1219 aa12.93□□□□□ -0.34
LINC00871-202ENST00000556071 IL27Q8NEV9 243 aa12.93□□□□□ -0.34
LINC00871-202ENST00000556071 KMT5BQ4FZB7 885 aa12.92□□□□□ -0.34
LINC00871-202ENST00000556071 SPIRE2Q8WWL2 714 aa12.9□□□□□ -0.34
LINC00871-202ENST00000556071 KDM4AO75164 1064 aa12.89□□□□□ -0.35
LINC00871-202ENST00000556071 FUT2Q10981 343 aa12.89□□□□□ -0.35
LINC00871-202ENST00000556071 NUTM1Q86Y26 1132 aa12.89□□□□□ -0.35
LINC00871-202ENST00000556071 ACTN4O43707 911 aaKnown RBP12.88□□□□□ -0.35
LINC00871-202ENST00000556071 NYAP1Q6ZVC0 841 aa12.88□□□□□ -0.35
LINC00871-202ENST00000556071 PRR14Q9BWN1 585 aa12.88□□□□□ -0.35
LINC00871-202ENST00000556071 TBC1D2Q9BYX2 928 aa12.88□□□□□ -0.35
LINC00871-202ENST00000556071 HCSTQ9UBK5 93 aa12.88□□□□□ -0.35
LINC00871-202ENST00000556071 HOXA2O43364 376 aa12.84□□□□□ -0.35
LINC00871-202ENST00000556071 USP46P62068 366 aa12.84□□□□□ -0.35
LINC00871-202ENST00000556071 PUS10Q3MIT2 529 aaKnown RBP12.84□□□□□ -0.35
LINC00871-202ENST00000556071 MYSM1Q5VVJ2 828 aa12.84□□□□□ -0.35
LINC00871-202ENST00000556071 DIXDC1Q155Q3 683 aa12.83□□□□□ -0.36
LINC00871-202ENST00000556071 HLA-CQ95604 372 aa12.83□□□□□ -0.36
LINC00871-202ENST00000556071 PCDHB3Q9Y5E6 796 aa12.83□□□□□ -0.36
LINC00871-202ENST00000556071 MOXD2PA6NHM9 499 aa12.82□□□□□ -0.36
LINC00871-202ENST00000556071 ATP6V1AP38606 617 aa12.82□□□□□ -0.36
LINC00871-202ENST00000556071 RSPH6AQ9H0K4 717 aa12.81□□□□□ -0.36
LINC00871-202ENST00000556071 NDUFV2P19404 249 aa12.8□□□□□ -0.36
LINC00871-202ENST00000556071 GUCA2AQ02747 115 aa12.8□□□□□ -0.36
LINC00871-202ENST00000556071 GRIPAP1Q4V328 841 aa12.8□□□□□ -0.36
LINC00871-202ENST00000556071 MORN1Q5T089 497 aa12.8□□□□□ -0.36
LINC00871-202ENST00000556071 BLOC1S3Q6QNY0 202 aa12.8□□□□□ -0.36
LINC00871-202ENST00000556071 COPS2P61201 443 aa12.79□□□□□ -0.36
LINC00871-202ENST00000556071 SH3D19Q5HYK7 790 aa12.79□□□□□ -0.36
LINC00871-202ENST00000556071 POLR3EQ9NVU0 708 aa12.78□□□□□ -0.36
LINC00871-202ENST00000556071 RSBN1LQ6PCB5 846 aaPredicted RBP12.77□□□□□ -0.37
LINC00871-202ENST00000556071 MTRQ99707 1265 aa12.77□□□□□ -0.37
LINC00871-202ENST00000556071 SKIV2LQ15477 1246 aaKnown RBP12.76□□□□□ -0.37
LINC00871-202ENST00000556071 TMEM132AQ24JP5 1023 aa12.76□□□□□ -0.37
LINC00871-202ENST00000556071 RIC3Q7Z5B4 369 aa12.76□□□□□ -0.37
LINC00871-202ENST00000556071 LIMD1Q9UGP4 676 aa12.76□□□□□ -0.37
LINC00871-202ENST00000556071 SLC27A5Q9Y2P5 690 aa12.76□□□□□ -0.37
LINC00871-202ENST00000556071 SPTLC1O15269 473 aa12.75□□□□□ -0.37
LINC00871-202ENST00000556071 FDX1P10109 184 aa12.75□□□□□ -0.37
LINC00871-202ENST00000556071 CLK2P49760 499 aaKnown RBP12.75□□□□□ -0.37
LINC00871-202ENST00000556071 PCDHGC3Q9UN70 934 aa12.75□□□□□ -0.37
LINC00871-202ENST00000556071 TJAP1Q5JTD0 557 aa12.74□□□□□ -0.37
LINC00871-202ENST00000556071 GOPCQ9HD26 462 aa12.74□□□□□ -0.37
LINC00871-202ENST00000556071 NR1I2O75469 434 aa12.73□□□□□ -0.37
LINC00871-202ENST00000556071 SCUBE3Q8IX30 993 aa12.73□□□□□ -0.37
LINC00871-202ENST00000556071 GJA5P36382 358 aa12.72□□□□□ -0.37
LINC00871-202ENST00000556071 PROCA1Q8NCQ7 364 aaPredicted RBP12.72□□□□□ -0.37
LINC00871-202ENST00000556071 PCDHB15Q9Y5E8 787 aa12.72□□□□□ -0.37
LINC00871-202ENST00000556071 CSPP1Q1MSJ5 1256 aa12.71□□□□□ -0.37
LINC00871-202ENST00000556071 ZNF516Q92618 1163 aa12.71□□□□□ -0.37
LINC00871-202ENST00000556071 IL21Q9HBE4 155 aa12.7□□□□□ -0.38
LINC00871-202ENST00000556071 ZPR1O75312 459 aa12.69□□□□□ -0.38
LINC00871-202ENST00000556071 PCMTD1Q96MG8 357 aaPredicted RBP12.69□□□□□ -0.38
LINC00871-202ENST00000556071 ATP1B4Q9UN42 357 aaPredicted RBP12.69□□□□□ -0.38
LINC00871-202ENST00000556071 ITGBL1O95965 494 aaPredicted RBP12.68□□□□□ -0.38
LINC00871-202ENST00000556071 RNF19BQ6ZMZ0 732 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms