RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 NCOA3Q9Y6Q9 1424 aa11.86□□□□□ -0.51
PTCSC3-201ENST00000556013 TMEM94Q12767 1356 aa11.85□□□□□ -0.51
PTCSC3-201ENST00000556013 BCANQ96GW7 911 aa11.85□□□□□ -0.51
PTCSC3-201ENST00000556013 PIK3R4Q99570 1358 aa11.84□□□□□ -0.51
PTCSC3-201ENST00000556013 PPP1R15AO75807 674 aaPredicted RBP11.84□□□□□ -0.51
PTCSC3-201ENST00000556013 RIMS2Q9UQ26 1411 aa11.84□□□□□ -0.51
PTCSC3-201ENST00000556013 UNC13BO14795 1591 aa11.84□□□□□ -0.51
PTCSC3-201ENST00000556013 NKTRP30414 1462 aaKnown RBP11.83□□□□□ -0.52
PTCSC3-201ENST00000556013 CHGAP10645 457 aaKnown RBP11.82□□□□□ -0.52
PTCSC3-201ENST00000556013 ITGAEP38570 1179 aa11.82□□□□□ -0.52
PTCSC3-201ENST00000556013 RRBP1Q9P2E9 1410 aaKnown RBP11.81□□□□□ -0.52
PTCSC3-201ENST00000556013 GCC2Q8IWJ2 1684 aa11.81□□□□□ -0.52
PTCSC3-201ENST00000556013 MSH6P52701 1360 aa11.8□□□□□ -0.52
PTCSC3-201ENST00000556013 TMEM131LA2VDJ0 1609 aa11.8□□□□□ -0.52
PTCSC3-201ENST00000556013 IQGAP3Q86VI3 1631 aa11.8□□□□□ -0.52
PTCSC3-201ENST00000556013 SLAIN2Q9P270 581 aa11.8□□□□□ -0.52
PTCSC3-201ENST00000556013 PHF23Q9BUL5 403 aaPredicted RBP11.79□□□□□ -0.52
PTCSC3-201ENST00000556013 C19orf44Q9H6X5 657 aa11.79□□□□□ -0.52
PTCSC3-201ENST00000556013 NWD1Q149M9 1564 aa11.79□□□□□ -0.52
PTCSC3-201ENST00000556013 PPARGC1BQ86YN6 1023 aaKnown RBP11.78□□□□□ -0.52
PTCSC3-201ENST00000556013 E9PCH4 1651 aa11.78□□□□□ -0.52
PTCSC3-201ENST00000556013 ADAMTS13Q76LX8 1427 aa11.77□□□□□ -0.52
PTCSC3-201ENST00000556013 MED1Q15648 1581 aaPredicted RBP11.77□□□□□ -0.53
PTCSC3-201ENST00000556013 CADPS2Q86UW7 1296 aa11.77□□□□□ -0.53
PTCSC3-201ENST00000556013 XIRP1Q702N8 1843 aaKnown RBP11.76□□□□□ -0.53
PTCSC3-201ENST00000556013 AMOTL2Q9Y2J4 779 aa11.76□□□□□ -0.53
PTCSC3-201ENST00000556013 ACIN1Q9UKV3 1341 aaKnown RBP11.76□□□□□ -0.53
PTCSC3-201ENST00000556013 CHD2O14647 1828 aaKnown RBP11.76□□□□□ -0.53
PTCSC3-201ENST00000556013 RBM33Q96EV2 1170 aaKnown RBP11.75□□□□□ -0.53
PTCSC3-201ENST00000556013 NAIPQ13075 1403 aa11.75□□□□□ -0.53
PTCSC3-201ENST00000556013 DIP2AQ14689 1571 aa11.75□□□□□ -0.53
PTCSC3-201ENST00000556013 ATF3P18847 181 aa11.74□□□□□ -0.53
PTCSC3-201ENST00000556013 NUTM2DQ5VT03 806 aaPredicted RBP11.74□□□□□ -0.53
PTCSC3-201ENST00000556013 VGFO15240 615 aaPredicted RBP11.73□□□□□ -0.53
PTCSC3-201ENST00000556013 ZNF326Q5BKZ1 582 aaKnown RBP11.73□□□□□ -0.53
PTCSC3-201ENST00000556013 RPGRIP1LQ68CZ1 1315 aa11.73□□□□□ -0.53
PTCSC3-201ENST00000556013 C14orf37Q86TY3 774 aa11.72□□□□□ -0.53
PTCSC3-201ENST00000556013 RGS17Q9UGC6 210 aaPredicted RBP11.72□□□□□ -0.53
PTCSC3-201ENST00000556013 MYO5BQ9ULV0 1848 aa11.72□□□□□ -0.53
PTCSC3-201ENST00000556013 HFM1A2PYH4 1435 aa11.71□□□□□ -0.53
PTCSC3-201ENST00000556013 JCADQ9P266 1359 aa11.71□□□□□ -0.53
PTCSC3-201ENST00000556013 SENP3Q9H4L4 574 aaPredicted RBP11.71□□□□□ -0.53
PTCSC3-201ENST00000556013 TRPM2O94759 1503 aa11.7□□□□□ -0.54
PTCSC3-201ENST00000556013 TRIM52Q96A61 297 aa11.7□□□□□ -0.54
PTCSC3-201ENST00000556013 SLC4A1APQ9BWU0 796 aaKnown RBP11.7□□□□□ -0.54
PTCSC3-201ENST00000556013 DCCP43146 1447 aa11.69□□□□□ -0.54
PTCSC3-201ENST00000556013 SETBP1Q9Y6X0 1596 aa11.69□□□□□ -0.54
PTCSC3-201ENST00000556013 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
PTCSC3-201ENST00000556013 ROBO1Q9Y6N7 1651 aa11.68□□□□□ -0.54
PTCSC3-201ENST00000556013 SPATA31A6Q5VVP1 1343 aa11.68□□□□□ -0.54
PTCSC3-201ENST00000556013 SPHKAPQ2M3C7 1700 aa11.67□□□□□ -0.54
PTCSC3-201ENST00000556013 METP08581 1390 aa11.66□□□□□ -0.54
PTCSC3-201ENST00000556013 BRINP3Q76B58 766 aa11.65□□□□□ -0.54
PTCSC3-201ENST00000556013 LRRC59Q96AG4 307 aaKnown RBP11.64□□□□□ -0.55
PTCSC3-201ENST00000556013 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.63□□□□□ -0.55
PTCSC3-201ENST00000556013 POTEAQ6S8J7 498 aa11.63□□□□□ -0.55
PTCSC3-201ENST00000556013 NEXMIFQ5QGS0 1516 aa11.63□□□□□ -0.55
PTCSC3-201ENST00000556013 PRAG1Q86YV5 1406 aa11.62□□□□□ -0.55
PTCSC3-201ENST00000556013 AHDC1Q5TGY3 1603 aaPredicted RBP11.62□□□□□ -0.55
PTCSC3-201ENST00000556013 NRXN3Q9Y4C0 1643 aa11.62□□□□□ -0.55
PTCSC3-201ENST00000556013 ZNF772Q68DY9 489 aaPredicted RBP11.62□□□□□ -0.55
PTCSC3-201ENST00000556013 MPHOSPH9Q99550 1183 aa11.62□□□□□ -0.55
PTCSC3-201ENST00000556013 CLTCL1P53675 1640 aa11.61□□□□□ -0.55
PTCSC3-201ENST00000556013 KIF1BO60333 1816 aa11.61□□□□□ -0.55
PTCSC3-201ENST00000556013 MST1RQ04912 1400 aa11.6□□□□□ -0.55
PTCSC3-201ENST00000556013 SETD5Q9C0A6 1442 aa11.6□□□□□ -0.55
PTCSC3-201ENST00000556013 ADGRL3Q9HAR2 1447 aa11.6□□□□□ -0.55
PTCSC3-201ENST00000556013 PHLPP1O60346 1717 aa11.6□□□□□ -0.55
PTCSC3-201ENST00000556013 XRN1Q8IZH2 1706 aaKnown RBP11.6□□□□□ -0.55
PTCSC3-201ENST00000556013 COL16A1Q07092 1604 aaPredicted RBP11.6□□□□□ -0.55
PTCSC3-201ENST00000556013 PTCH1Q13635 1447 aa11.6□□□□□ -0.55
PTCSC3-201ENST00000556013 ANKRD30BQ9BXX2 1392 aa11.59□□□□□ -0.55
PTCSC3-201ENST00000556013 SIRT1Q96EB6 747 aa11.58□□□□□ -0.56
PTCSC3-201ENST00000556013 CCDC144AA2RUR9 1427 aa11.58□□□□□ -0.56
PTCSC3-201ENST00000556013 MEX3CQ5U5Q3 659 aaKnown RBP11.57□□□□□ -0.56
PTCSC3-201ENST00000556013 ROBO2Q9HCK4 1378 aa11.56□□□□□ -0.56
PTCSC3-201ENST00000556013 HRCP23327 699 aa11.56□□□□□ -0.56
PTCSC3-201ENST00000556013 SPATA31E1Q6ZUB1 1445 aa11.56□□□□□ -0.56
PTCSC3-201ENST00000556013 C1orf167Q5SNV9 1468 aa11.56□□□□□ -0.56
PTCSC3-201ENST00000556013 SOS2Q07890 1332 aaPredicted RBP11.56□□□□□ -0.56
PTCSC3-201ENST00000556013 ASXL1Q8IXJ9 1541 aa11.55□□□□□ -0.56
PTCSC3-201ENST00000556013 ABCC11Q96J66 1382 aa11.55□□□□□ -0.56
PTCSC3-201ENST00000556013 FOXD1Q16676 465 aa11.55□□□□□ -0.56
PTCSC3-201ENST00000556013 RGL3Q3MIN7 710 aa11.55□□□□□ -0.56
PTCSC3-201ENST00000556013 STAC3Q96MF2 364 aa11.55□□□□□ -0.56
PTCSC3-201ENST00000556013 ADGRF5Q8IZF2 1346 aa11.55□□□□□ -0.56
PTCSC3-201ENST00000556013 SHPRHQ149N8 1683 aa11.54□□□□□ -0.56
PTCSC3-201ENST00000556013 RXRBP28702 533 aa11.53□□□□□ -0.56
PTCSC3-201ENST00000556013 ORAI2Q96SN7 254 aa11.53□□□□□ -0.56
PTCSC3-201ENST00000556013 C14orf93Q9H972 538 aaKnown RBP11.53□□□□□ -0.56
PTCSC3-201ENST00000556013 LRP6O75581 1613 aa11.53□□□□□ -0.56
PTCSC3-201ENST00000556013 LRPPRCP42704 1394 aaKnown RBP11.53□□□□□ -0.56
PTCSC3-201ENST00000556013 TECPR2O15040 1411 aa11.52□□□□□ -0.56
PTCSC3-201ENST00000556013 NHSL1Q5SYE7 1610 aa11.51□□□□□ -0.57
PTCSC3-201ENST00000556013 NUTM2BA6NNL0 878 aaPredicted RBP11.51□□□□□ -0.57
PTCSC3-201ENST00000556013 NUTM2EB1AL46 878 aaPredicted RBP11.51□□□□□ -0.57
PTCSC3-201ENST00000556013 NUTM2AQ8IVF1 878 aaPredicted RBP11.51□□□□□ -0.57
PTCSC3-201ENST00000556013 NPHP3Q7Z494 1330 aa11.51□□□□□ -0.57
PTCSC3-201ENST00000556013 PNPLA6Q8IY17 1366 aa11.51□□□□□ -0.57
PTCSC3-201ENST00000556013 PPLO60437 1756 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms