RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 SLC26A8Q96RN1 970 aa27.25■■□□□ 1.95
NPC2-208ENST00000556009 CHD2O14647 1828 aaKnown RBP27.23■■□□□ 1.95
NPC2-208ENST00000556009 HDGFP51858 240 aaKnown RBP27.22■■□□□ 1.95
NPC2-208ENST00000556009 ZFYVE9O95405 1425 aa27.22■■□□□ 1.95
NPC2-208ENST00000556009 IQGAP3Q86VI3 1631 aa27.21■■□□□ 1.95
NPC2-208ENST00000556009 TMEM94Q12767 1356 aa27.21■■□□□ 1.95
NPC2-208ENST00000556009 ROBO1Q9Y6N7 1651 aa27.19■■□□□ 1.94
NPC2-208ENST00000556009 PROSER2Q86WR7 435 aaPredicted RBP27.17■■□□□ 1.94
NPC2-208ENST00000556009 NKTRP30414 1462 aaKnown RBP27.17■■□□□ 1.94
NPC2-208ENST00000556009 FAM135BQ49AJ0 1406 aa27.16■■□□□ 1.94
NPC2-208ENST00000556009 PLEKHG1Q9ULL1 1385 aa27.16■■□□□ 1.94
NPC2-208ENST00000556009 RBM33Q96EV2 1170 aaKnown RBP27.15■■□□□ 1.94
NPC2-208ENST00000556009 BCANQ96GW7 911 aa27.15■■□□□ 1.94
NPC2-208ENST00000556009 RIMS2Q9UQ26 1411 aa27.14■■□□□ 1.93
NPC2-208ENST00000556009 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.13■■□□□ 1.93
NPC2-208ENST00000556009 PPP1R15AO75807 674 aaPredicted RBP27.11■■□□□ 1.93
NPC2-208ENST00000556009 PHF23Q9BUL5 403 aaPredicted RBP27.11■■□□□ 1.93
NPC2-208ENST00000556009 TBX22Q9Y458 520 aa27.11■■□□□ 1.93
NPC2-208ENST00000556009 NUP155O75694 1391 aa27.1■■□□□ 1.93
NPC2-208ENST00000556009 CHGAP10645 457 aaKnown RBP27.07■■□□□ 1.92
NPC2-208ENST00000556009 ITGAEP38570 1179 aa27.07■■□□□ 1.92
NPC2-208ENST00000556009 SPHKAPQ2M3C7 1700 aa27.05■■□□□ 1.92
NPC2-208ENST00000556009 PPARGC1BQ86YN6 1023 aaKnown RBP27.04■■□□□ 1.92
NPC2-208ENST00000556009 PHLPP1O60346 1717 aa27.03■■□□□ 1.92
NPC2-208ENST00000556009 MSH6P52701 1360 aa27.03■■□□□ 1.92
NPC2-208ENST00000556009 ADAMTS13Q76LX8 1427 aa27.03■■□□□ 1.92
NPC2-208ENST00000556009 DIP2AQ14689 1571 aa27.02■■□□□ 1.92
NPC2-208ENST00000556009 NCOA3Q9Y6Q9 1424 aa27.01■■□□□ 1.91
NPC2-208ENST00000556009 RGS17Q9UGC6 210 aaPredicted RBP27.01■■□□□ 1.91
NPC2-208ENST00000556009 PIK3R4Q99570 1358 aa27■■□□□ 1.91
NPC2-208ENST00000556009 NUTM2DQ5VT03 806 aaPredicted RBP27■■□□□ 1.91
NPC2-208ENST00000556009 SLAIN2Q9P270 581 aa27■■□□□ 1.91
NPC2-208ENST00000556009 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.99■■□□□ 1.91
NPC2-208ENST00000556009 NRXN3Q9Y4C0 1643 aa26.98■■□□□ 1.91
NPC2-208ENST00000556009 COL16A1Q07092 1604 aaPredicted RBP26.94■■□□□ 1.9
NPC2-208ENST00000556009 RRBP1Q9P2E9 1410 aaKnown RBP26.93■■□□□ 1.9
NPC2-208ENST00000556009 TRPM2O94759 1503 aa26.93■■□□□ 1.9
NPC2-208ENST00000556009 PTPRUQ92729 1446 aa26.9■■□□□ 1.9
NPC2-208ENST00000556009 XRN1Q8IZH2 1706 aaKnown RBP26.9■■□□□ 1.9
NPC2-208ENST00000556009 CLTCL1P53675 1640 aa26.9■■□□□ 1.9
NPC2-208ENST00000556009 C19orf44Q9H6X5 657 aa26.89■■□□□ 1.9
NPC2-208ENST00000556009 SETBP1Q9Y6X0 1596 aa26.88■■□□□ 1.89
NPC2-208ENST00000556009 AMOTL2Q9Y2J4 779 aa26.88■■□□□ 1.89
NPC2-208ENST00000556009 CADPS2Q86UW7 1296 aa26.87■■□□□ 1.89
NPC2-208ENST00000556009 C14orf37Q86TY3 774 aa26.86■■□□□ 1.89
NPC2-208ENST00000556009 KIF1BO60333 1816 aa26.86■■□□□ 1.89
NPC2-208ENST00000556009 NAIPQ13075 1403 aa26.85■■□□□ 1.89
NPC2-208ENST00000556009 AHDC1Q5TGY3 1603 aaPredicted RBP26.83■■□□□ 1.89
NPC2-208ENST00000556009 ZNF326Q5BKZ1 582 aaKnown RBP26.83■■□□□ 1.89
NPC2-208ENST00000556009 NEXMIFQ5QGS0 1516 aa26.82■■□□□ 1.88
NPC2-208ENST00000556009 ATF3P18847 181 aa26.82■■□□□ 1.88
NPC2-208ENST00000556009 POTEAQ6S8J7 498 aa26.82■■□□□ 1.88
NPC2-208ENST00000556009 JCADQ9P266 1359 aa26.82■■□□□ 1.88
NPC2-208ENST00000556009 SETD1AO15047 1707 aaKnown RBP26.81■■□□□ 1.88
NPC2-208ENST00000556009 SHPRHQ149N8 1683 aa26.8■■□□□ 1.88
NPC2-208ENST00000556009 LRP6O75581 1613 aa26.78■■□□□ 1.88
NPC2-208ENST00000556009 NALCNQ8IZF0 1738 aa26.76■■□□□ 1.88
NPC2-208ENST00000556009 HFM1A2PYH4 1435 aa26.74■■□□□ 1.87
NPC2-208ENST00000556009 DCCP43146 1447 aa26.74■■□□□ 1.87
NPC2-208ENST00000556009 METP08581 1390 aa26.74■■□□□ 1.87
NPC2-208ENST00000556009 NHSL1Q5SYE7 1610 aa26.73■■□□□ 1.87
NPC2-208ENST00000556009 SPATA31A6Q5VVP1 1343 aa26.71■■□□□ 1.87
NPC2-208ENST00000556009 BRINP3Q76B58 766 aa26.71■■□□□ 1.87
NPC2-208ENST00000556009 TRIM52Q96A61 297 aa26.71■■□□□ 1.87
NPC2-208ENST00000556009 ASXL1Q8IXJ9 1541 aa26.7■■□□□ 1.87
NPC2-208ENST00000556009 MST1RQ04912 1400 aa26.68■■□□□ 1.86
NPC2-208ENST00000556009 VGFO15240 615 aaPredicted RBP26.68■■□□□ 1.86
NPC2-208ENST00000556009 PPLO60437 1756 aa26.68■■□□□ 1.86
NPC2-208ENST00000556009 SLC4A1APQ9BWU0 796 aaKnown RBP26.67■■□□□ 1.86
NPC2-208ENST00000556009 RPGRIP1LQ68CZ1 1315 aa26.66■■□□□ 1.86
NPC2-208ENST00000556009 ADGRL3Q9HAR2 1447 aa26.64■■□□□ 1.85
NPC2-208ENST00000556009 SETD5Q9C0A6 1442 aa26.57■■□□□ 1.84
NPC2-208ENST00000556009 MEX3CQ5U5Q3 659 aaKnown RBP26.57■■□□□ 1.84
NPC2-208ENST00000556009 ZNF772Q68DY9 489 aaPredicted RBP26.56■■□□□ 1.84
NPC2-208ENST00000556009 LRRC59Q96AG4 307 aaKnown RBP26.56■■□□□ 1.84
NPC2-208ENST00000556009 PTCH1Q13635 1447 aa26.56■■□□□ 1.84
NPC2-208ENST00000556009 LAMC1P11047 1609 aa26.55■■□□□ 1.84
NPC2-208ENST00000556009 PRAG1Q86YV5 1406 aa26.55■■□□□ 1.84
NPC2-208ENST00000556009 IFT172Q9UG01 1749 aa26.54■■□□□ 1.84
NPC2-208ENST00000556009 DDX17Q92841 729 aaKnown RBP26.54■■□□□ 1.84
NPC2-208ENST00000556009 ROBO2Q9HCK4 1378 aa26.53■■□□□ 1.84
NPC2-208ENST00000556009 C1orf167Q5SNV9 1468 aa26.5■■□□□ 1.83
NPC2-208ENST00000556009 NUTM2BA6NNL0 878 aaPredicted RBP26.5■■□□□ 1.83
NPC2-208ENST00000556009 NUTM2EB1AL46 878 aaPredicted RBP26.5■■□□□ 1.83
NPC2-208ENST00000556009 FOXD1Q16676 465 aa26.5■■□□□ 1.83
NPC2-208ENST00000556009 NUTM2AQ8IVF1 878 aaPredicted RBP26.5■■□□□ 1.83
NPC2-208ENST00000556009 MPHOSPH9Q99550 1183 aa26.49■■□□□ 1.83
NPC2-208ENST00000556009 PNPLA6Q8IY17 1366 aa26.46■■□□□ 1.83
NPC2-208ENST00000556009 CCDC144AA2RUR9 1427 aa26.46■■□□□ 1.83
NPC2-208ENST00000556009 ACIN1Q9UKV3 1341 aaKnown RBP26.45■■□□□ 1.83
NPC2-208ENST00000556009 SPATA31E1Q6ZUB1 1445 aa26.43■■□□□ 1.82
NPC2-208ENST00000556009 ADGRF5Q8IZF2 1346 aa26.42■■□□□ 1.82
NPC2-208ENST00000556009 ORAI2Q96SN7 254 aa26.42■■□□□ 1.82
NPC2-208ENST00000556009 ANKRD30BQ9BXX2 1392 aa26.42■■□□□ 1.82
NPC2-208ENST00000556009 AFF2P51816 1311 aa26.41■■□□□ 1.82
NPC2-208ENST00000556009 RXRBP28702 533 aa26.41■■□□□ 1.82
NPC2-208ENST00000556009 RGL3Q3MIN7 710 aa26.41■■□□□ 1.82
NPC2-208ENST00000556009 CDC42BPGQ6DT37 1551 aa26.41■■□□□ 1.82
NPC2-208ENST00000556009 SOS2Q07890 1332 aaPredicted RBP26.4■■□□□ 1.82
NPC2-208ENST00000556009 KNDC1Q76NI1 1749 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms