RNA–Protein interactions for RNA: ENST00000555619.5

NPC2-207, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPC2, Length 1,035 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-207ENST00000555619 UBR1Q8IWV7 1749 aa37.05■■■■□ 3.52
NPC2-207ENST00000555619 VGFO15240 615 aaPredicted RBP37.04■■■■□ 3.52
NPC2-207ENST00000555619 NBPF8Q3BBV2 869 aa37.04■■■■□ 3.52
NPC2-207ENST00000555619 HDGFP51858 240 aaKnown RBP37.03■■■■□ 3.52
NPC2-207ENST00000555619 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.02■■■■□ 3.52
NPC2-207ENST00000555619 NEXMIFQ5QGS0 1516 aa37■■■■□ 3.51
NPC2-207ENST00000555619 TXNDC2Q86VQ3 553 aa37■■■■□ 3.51
NPC2-207ENST00000555619 KDM5AP29375 1690 aaKnown RBP36.99■■■■□ 3.51
NPC2-207ENST00000555619 ZFYVE9O95405 1425 aa36.99■■■■□ 3.51
NPC2-207ENST00000555619 MYO5BQ9ULV0 1848 aa36.99■■■■□ 3.51
NPC2-207ENST00000555619 LTKP29376 864 aa36.98■■■■□ 3.51
NPC2-207ENST00000555619 SENP3Q9H4L4 574 aaPredicted RBP36.98■■■■□ 3.51
NPC2-207ENST00000555619 EID1Q9Y6B2 187 aa36.98■■■■□ 3.51
NPC2-207ENST00000555619 ZNF142P52746 1687 aaPredicted RBP36.95■■■■□ 3.51
NPC2-207ENST00000555619 MYOM2P54296 1465 aa36.94■■■■□ 3.5
NPC2-207ENST00000555619 ARHGAP23Q9P227 1491 aa36.94■■■■□ 3.5
NPC2-207ENST00000555619 PRAG1Q86YV5 1406 aa36.93■■■■□ 3.5
NPC2-207ENST00000555619 HSPA2P54652 639 aa36.93■■■■□ 3.5
NPC2-207ENST00000555619 SLIT1O75093 1534 aa36.92■■■■□ 3.5
NPC2-207ENST00000555619 ANKLE2Q86XL3 938 aa36.91■■■■□ 3.5
NPC2-207ENST00000555619 PPLO60437 1756 aa36.89■■■■□ 3.5
NPC2-207ENST00000555619 NRXN1Q9ULB1 1477 aa36.88■■■■□ 3.49
NPC2-207ENST00000555619 BCANQ96GW7 911 aa36.87■■■■□ 3.49
NPC2-207ENST00000555619 IFT172Q9UG01 1749 aa36.87■■■■□ 3.49
NPC2-207ENST00000555619 LMTK3Q96Q04 1460 aa36.87■■■■□ 3.49
NPC2-207ENST00000555619 CFAP70Q5T0N1 1121 aa36.86■■■■□ 3.49
NPC2-207ENST00000555619 NCKAP5LQ9HCH0 1330 aa36.84■■■■□ 3.49
NPC2-207ENST00000555619 SCAF11Q99590 1463 aaKnown RBP36.82■■■■□ 3.49
NPC2-207ENST00000555619 C14orf93Q9H972 538 aaKnown RBP36.82■■■■□ 3.48
NPC2-207ENST00000555619 PIK3C2GO75747 1445 aa36.82■■■■□ 3.48
NPC2-207ENST00000555619 NBPF1Q3BBV0 1214 aa36.81■■■■□ 3.48
NPC2-207ENST00000555619 PLEKHG1Q9ULL1 1385 aa36.79■■■■□ 3.48
NPC2-207ENST00000555619 AEBP2Q6ZN18 517 aaPredicted RBP36.76■■■■□ 3.48
NPC2-207ENST00000555619 SLC26A8Q96RN1 970 aa36.73■■■■□ 3.47
NPC2-207ENST00000555619 ROCK2O75116 1388 aaKnown RBP36.73■■■■□ 3.47
NPC2-207ENST00000555619 RALGAPBQ86X10 1494 aa36.72■■■■□ 3.47
NPC2-207ENST00000555619 TMEM132EQ6IEE7 984 aa36.71■■■■□ 3.47
NPC2-207ENST00000555619 CARD11Q9BXL7 1154 aa36.7■■■■□ 3.47
NPC2-207ENST00000555619 NPHP4O75161 1426 aaPredicted RBP36.67■■■■□ 3.46
NPC2-207ENST00000555619 ADAMTS13Q76LX8 1427 aa36.67■■■■□ 3.46
NPC2-207ENST00000555619 TBX22Q9Y458 520 aa36.65■■■■□ 3.46
NPC2-207ENST00000555619 ALKQ9UM73 1620 aa36.65■■■■□ 3.46
NPC2-207ENST00000555619 SETBP1Q9Y6X0 1596 aa36.65■■■■□ 3.46
NPC2-207ENST00000555619 TRPM1Q7Z4N2 1603 aa36.64■■■■□ 3.46
NPC2-207ENST00000555619 GPRASP1Q5JY77 1395 aa36.63■■■■□ 3.45
NPC2-207ENST00000555619 MED14O60244 1454 aa36.62■■■■□ 3.45
NPC2-207ENST00000555619 METP08581 1390 aa36.61■■■■□ 3.45
NPC2-207ENST00000555619 NRXN3Q9Y4C0 1643 aa36.6■■■■□ 3.45
NPC2-207ENST00000555619 STK26Q9P289 416 aa36.58■■■■□ 3.45
NPC2-207ENST00000555619 IQGAP1P46940 1657 aa36.56■■■■□ 3.44
NPC2-207ENST00000555619 KIAA1210Q9ULL0 1709 aa36.56■■■■□ 3.44
NPC2-207ENST00000555619 ADGRB1O14514 1584 aa36.54■■■■□ 3.44
NPC2-207ENST00000555619 TRAK1Q9UPV9 953 aa36.53■■■■□ 3.44
NPC2-207ENST00000555619 EIF4G2P78344 907 aaKnown RBP eCLIP36.52■■■■□ 3.44
NPC2-207ENST00000555619 ASXL1Q8IXJ9 1541 aa36.52■■■■□ 3.44
NPC2-207ENST00000555619 LAMC1P11047 1609 aa36.52■■■■□ 3.44
NPC2-207ENST00000555619 HSPA5P11021 654 aaKnown RBP36.5■■■■□ 3.43
NPC2-207ENST00000555619 POLR1AO95602 1720 aaPredicted RBP36.5■■■■□ 3.43
NPC2-207ENST00000555619 USP47Q96K76 1375 aa36.49■■■■□ 3.43
NPC2-207ENST00000555619 YTHDC2Q9H6S0 1430 aaKnown RBP36.49■■■■□ 3.43
NPC2-207ENST00000555619 LRPPRCP42704 1394 aaKnown RBP36.48■■■■□ 3.43
NPC2-207ENST00000555619 HIRIP3Q9BW71 556 aaPredicted RBP36.47■■■■□ 3.43
NPC2-207ENST00000555619 DIP2AQ14689 1571 aa36.45■■■■□ 3.43
NPC2-207ENST00000555619 AMOTL2Q9Y2J4 779 aa36.45■■■■□ 3.43
NPC2-207ENST00000555619 STRCQ7RTU9 1775 aa36.45■■■■□ 3.43
NPC2-207ENST00000555619 PTPRUQ92729 1446 aa36.44■■■■□ 3.42
NPC2-207ENST00000555619 SETD1AO15047 1707 aaKnown RBP36.44■■■■□ 3.42
NPC2-207ENST00000555619 DMRT2Q9Y5R5 561 aa36.43■■■■□ 3.42
NPC2-207ENST00000555619 ABCC11Q96J66 1382 aa36.42■■■■□ 3.42
NPC2-207ENST00000555619 PIK3R4Q99570 1358 aa36.42■■■■□ 3.42
NPC2-207ENST00000555619 ST20-MTHFSA0A0A6YYL1 179 aa36.42■■■■□ 3.42
NPC2-207ENST00000555619 KCNA6P17658 529 aa36.37■■■■□ 3.41
NPC2-207ENST00000555619 PRAM1Q96QH2 718 aa36.35■■■■□ 3.41
NPC2-207ENST00000555619 POGKQ9P215 609 aa36.35■■■■□ 3.41
NPC2-207ENST00000555619 EIF3AQ14152 1382 aaKnown RBP36.35■■■■□ 3.41
NPC2-207ENST00000555619 WAPLQ7Z5K2 1190 aa36.34■■■■□ 3.41
NPC2-207ENST00000555619 SIRT1Q96EB6 747 aa36.33■■■■□ 3.41
NPC2-207ENST00000555619 SAFB2Q14151 953 aaKnown RBP eCLIP36.32■■■■□ 3.4
NPC2-207ENST00000555619 CENPJQ9HC77 1338 aaPredicted RBP36.32■■■■□ 3.4
NPC2-207ENST00000555619 ROBO2Q9HCK4 1378 aa36.31■■■■□ 3.4
NPC2-207ENST00000555619 TECPR2O15040 1411 aa36.3■■■■□ 3.4
NPC2-207ENST00000555619 PLEKHH1Q9ULM0 1364 aa36.27■■■■□ 3.4
NPC2-207ENST00000555619 DLC1Q96QB1 1528 aa36.26■■■■□ 3.4
NPC2-207ENST00000555619 TESK2Q96S53 571 aa36.26■■■■□ 3.4
NPC2-207ENST00000555619 FAM135BQ49AJ0 1406 aa36.24■■■■□ 3.39
NPC2-207ENST00000555619 ZNF316A6NFI3 1004 aaPredicted RBP36.23■■■■□ 3.39
NPC2-207ENST00000555619 ZNF335Q9H4Z2 1342 aaPredicted RBP36.22■■■■□ 3.39
NPC2-207ENST00000555619 MINK1Q8N4C8 1332 aaPredicted RBP36.2■■■■□ 3.39
NPC2-207ENST00000555619 PROSER2Q86WR7 435 aaPredicted RBP36.2■■■■□ 3.39
NPC2-207ENST00000555619 PTCH1Q13635 1447 aa36.19■■■■□ 3.38
NPC2-207ENST00000555619 RBM33Q96EV2 1170 aaKnown RBP36.19■■■■□ 3.38
NPC2-207ENST00000555619 CPS1P31327 1500 aa36.18■■■■□ 3.38
NPC2-207ENST00000555619 XRN1Q8IZH2 1706 aaKnown RBP36.18■■■■□ 3.38
NPC2-207ENST00000555619 CHD2O14647 1828 aaKnown RBP36.17■■■■□ 3.38
NPC2-207ENST00000555619 ARHGEF28Q8N1W1 1705 aaKnown RBP36.17■■■■□ 3.38
NPC2-207ENST00000555619 C11orf95C9JLR9 678 aaPredicted RBP36.16■■■■□ 3.38
NPC2-207ENST00000555619 KNDC1Q76NI1 1749 aa36.15■■■■□ 3.38
NPC2-207ENST00000555619 NWD1Q149M9 1564 aa36.14■■■■□ 3.38
NPC2-207ENST00000555619 TMF1P82094 1093 aa36.13■■■■□ 3.37
NPC2-207ENST00000555619 SLC24A1O60721 1099 aa36.11■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms