RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 UHRF1BP1Q6BDS2 1440 aa13.72□□□□□ -0.21
HNRNPC-220ENST00000555585 IDI1Q13907 227 aa13.71□□□□□ -0.21
HNRNPC-220ENST00000555585 C3P01024 1663 aa13.7□□□□□ -0.22
HNRNPC-220ENST00000555585 MADDQ8WXG6 1647 aa13.7□□□□□ -0.22
HNRNPC-220ENST00000555585 RIMS1Q86UR5 1692 aaKnown RBP13.69□□□□□ -0.22
HNRNPC-220ENST00000555585 SLC4A2P04920 1241 aa13.69□□□□□ -0.22
HNRNPC-220ENST00000555585 STAC3Q96MF2 364 aa13.69□□□□□ -0.22
HNRNPC-220ENST00000555585 STAG3Q9UJ98 1225 aa13.69□□□□□ -0.22
HNRNPC-220ENST00000555585 IFT172Q9UG01 1749 aa13.69□□□□□ -0.22
HNRNPC-220ENST00000555585 MYO5BQ9ULV0 1848 aa13.69□□□□□ -0.22
HNRNPC-220ENST00000555585 PRAG1Q86YV5 1406 aa13.68□□□□□ -0.22
HNRNPC-220ENST00000555585 CEBPAP49715 358 aaPredicted RBP13.68□□□□□ -0.22
HNRNPC-220ENST00000555585 TNRQ92752 1358 aa13.68□□□□□ -0.22
HNRNPC-220ENST00000555585 ADAMTSL3P82987 1691 aa13.67□□□□□ -0.22
HNRNPC-220ENST00000555585 PPLO60437 1756 aa13.67□□□□□ -0.22
HNRNPC-220ENST00000555585 TMEM131LA2VDJ0 1609 aa13.67□□□□□ -0.22
HNRNPC-220ENST00000555585 TRPM1Q7Z4N2 1603 aa13.67□□□□□ -0.22
HNRNPC-220ENST00000555585 RALGAPBQ86X10 1494 aa13.67□□□□□ -0.22
HNRNPC-220ENST00000555585 RPGRIP1LQ68CZ1 1315 aa13.66□□□□□ -0.22
HNRNPC-220ENST00000555585 MYOM2P54296 1465 aa13.65□□□□□ -0.22
HNRNPC-220ENST00000555585 CAPN15O75808 1086 aa13.64□□□□□ -0.23
HNRNPC-220ENST00000555585 EIF4G2P78344 907 aaKnown RBP eCLIP13.64□□□□□ -0.23
HNRNPC-220ENST00000555585 HIRIP3Q9BW71 556 aaPredicted RBP13.64□□□□□ -0.23
HNRNPC-220ENST00000555585 ROCK2O75116 1388 aaKnown RBP13.63□□□□□ -0.23
HNRNPC-220ENST00000555585 HSPA5P11021 654 aaKnown RBP13.63□□□□□ -0.23
HNRNPC-220ENST00000555585 CARD11Q9BXL7 1154 aa13.63□□□□□ -0.23
HNRNPC-220ENST00000555585 ADGRF5Q8IZF2 1346 aa13.63□□□□□ -0.23
HNRNPC-220ENST00000555585 NEXMIFQ5QGS0 1516 aa13.62□□□□□ -0.23
HNRNPC-220ENST00000555585 VGFO15240 615 aaPredicted RBP13.61□□□□□ -0.23
HNRNPC-220ENST00000555585 NUTM2DQ5VT03 806 aaPredicted RBP13.61□□□□□ -0.23
HNRNPC-220ENST00000555585 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
HNRNPC-220ENST00000555585 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
HNRNPC-220ENST00000555585 NLRP1Q9C000 1473 aa13.61□□□□□ -0.23
HNRNPC-220ENST00000555585 NBPF1Q3BBV0 1214 aa13.6□□□□□ -0.23
HNRNPC-220ENST00000555585 KIAA1210Q9ULL0 1709 aa13.6□□□□□ -0.23
HNRNPC-220ENST00000555585 UBR1Q8IWV7 1749 aa13.59□□□□□ -0.23
HNRNPC-220ENST00000555585 LAMC1P11047 1609 aa13.59□□□□□ -0.23
HNRNPC-220ENST00000555585 KDM5AP29375 1690 aaKnown RBP13.59□□□□□ -0.23
HNRNPC-220ENST00000555585 USP47Q96K76 1375 aa13.58□□□□□ -0.23
HNRNPC-220ENST00000555585 NRXN1Q9ULB1 1477 aa13.58□□□□□ -0.24
HNRNPC-220ENST00000555585 MYO3AQ8NEV4 1616 aa13.57□□□□□ -0.24
HNRNPC-220ENST00000555585 RIMS2Q9UQ26 1411 aa13.57□□□□□ -0.24
HNRNPC-220ENST00000555585 CFAP70Q5T0N1 1121 aa13.57□□□□□ -0.24
HNRNPC-220ENST00000555585 GPRASP1Q5JY77 1395 aa13.57□□□□□ -0.24
HNRNPC-220ENST00000555585 ZFYVE9O95405 1425 aa13.56□□□□□ -0.24
HNRNPC-220ENST00000555585 PIK3C2GO75747 1445 aa13.56□□□□□ -0.24
HNRNPC-220ENST00000555585 HDGFP51858 240 aaKnown RBP13.55□□□□□ -0.24
HNRNPC-220ENST00000555585 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.55□□□□□ -0.24
HNRNPC-220ENST00000555585 C14orf93Q9H972 538 aaKnown RBP13.54□□□□□ -0.24
HNRNPC-220ENST00000555585 PTPRMP28827 1452 aa13.54□□□□□ -0.24
HNRNPC-220ENST00000555585 DIEXFQ68CQ4 756 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-220ENST00000555585 IQGAP1P46940 1657 aa13.53□□□□□ -0.24
HNRNPC-220ENST00000555585 TMEM2Q9UHN6 1383 aa13.52□□□□□ -0.25
HNRNPC-220ENST00000555585 CEP170BQ9Y4F5 1589 aaPredicted RBP13.52□□□□□ -0.25
HNRNPC-220ENST00000555585 SETBP1Q9Y6X0 1596 aa13.52□□□□□ -0.25
HNRNPC-220ENST00000555585 SCAF11Q99590 1463 aaKnown RBP13.51□□□□□ -0.25
HNRNPC-220ENST00000555585 ST20-MTHFSA0A0A6YYL1 179 aa13.51□□□□□ -0.25
HNRNPC-220ENST00000555585 DSG3P32926 999 aa13.51□□□□□ -0.25
HNRNPC-220ENST00000555585 THEMISQ8N1K5 641 aaPredicted RBP13.51□□□□□ -0.25
HNRNPC-220ENST00000555585 SETD1BQ9UPS6 1966 aaKnown RBP13.51□□□□□ -0.25
HNRNPC-220ENST00000555585 BCANQ96GW7 911 aa13.5□□□□□ -0.25
HNRNPC-220ENST00000555585 EID1Q9Y6B2 187 aa13.5□□□□□ -0.25
HNRNPC-220ENST00000555585 POLR1AO95602 1720 aaPredicted RBP13.5□□□□□ -0.25
HNRNPC-220ENST00000555585 ZNF142P52746 1687 aaPredicted RBP13.5□□□□□ -0.25
HNRNPC-220ENST00000555585 TMEM132EQ6IEE7 984 aa13.49□□□□□ -0.25
HNRNPC-220ENST00000555585 ALKQ9UM73 1620 aa13.49□□□□□ -0.25
HNRNPC-220ENST00000555585 EIF3AQ14152 1382 aaKnown RBP13.48□□□□□ -0.25
HNRNPC-220ENST00000555585 TXNDC2Q86VQ3 553 aa13.48□□□□□ -0.25
HNRNPC-220ENST00000555585 SLIT1O75093 1534 aa13.48□□□□□ -0.25
HNRNPC-220ENST00000555585 ADGRB1O14514 1584 aa13.47□□□□□ -0.25
HNRNPC-220ENST00000555585 DDX10Q13206 875 aaKnown RBP13.47□□□□□ -0.25
HNRNPC-220ENST00000555585 POLR3GLQ9BT43 218 aa13.47□□□□□ -0.25
HNRNPC-220ENST00000555585 ARHGAP23Q9P227 1491 aa13.47□□□□□ -0.25
HNRNPC-220ENST00000555585 CCDC7Q96M83 1385 aa13.46□□□□□ -0.25
HNRNPC-220ENST00000555585 C11orf95C9JLR9 678 aaPredicted RBP13.46□□□□□ -0.25
HNRNPC-220ENST00000555585 LTKP29376 864 aa13.46□□□□□ -0.25
HNRNPC-220ENST00000555585 TRAK1Q9UPV9 953 aa13.46□□□□□ -0.25
HNRNPC-220ENST00000555585 WASHC2AQ641Q2 1341 aa13.45□□□□□ -0.26
HNRNPC-220ENST00000555585 STK26Q9P289 416 aa13.45□□□□□ -0.26
HNRNPC-220ENST00000555585 NRXN3Q9Y4C0 1643 aa13.45□□□□□ -0.26
HNRNPC-220ENST00000555585 PLEKHG1Q9ULL1 1385 aa13.45□□□□□ -0.26
HNRNPC-220ENST00000555585 ASXL1Q8IXJ9 1541 aa13.44□□□□□ -0.26
HNRNPC-220ENST00000555585 KDM4FA0A1W2PPD8 638 aa13.44□□□□□ -0.26
HNRNPC-220ENST00000555585 SETD1AO15047 1707 aaKnown RBP13.44□□□□□ -0.26
HNRNPC-220ENST00000555585 KIF7Q2M1P5 1343 aa13.43□□□□□ -0.26
HNRNPC-220ENST00000555585 SAMD1Q6SPF0 538 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-220ENST00000555585 ARHGEF28Q8N1W1 1705 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-220ENST00000555585 YTHDC2Q9H6S0 1430 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-220ENST00000555585 TMF1P82094 1093 aa13.42□□□□□ -0.26
HNRNPC-220ENST00000555585 TESK2Q96S53 571 aa13.42□□□□□ -0.26
HNRNPC-220ENST00000555585 ZNF219Q9P2Y4 722 aaPredicted RBP13.42□□□□□ -0.26
HNRNPC-220ENST00000555585 CENPJQ9HC77 1338 aaPredicted RBP13.41□□□□□ -0.26
HNRNPC-220ENST00000555585 QRICH2Q9H0J4 1663 aa13.41□□□□□ -0.26
HNRNPC-220ENST00000555585 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
HNRNPC-220ENST00000555585 SLC24A1O60721 1099 aa13.39□□□□□ -0.27
HNRNPC-220ENST00000555585 LRPPRCP42704 1394 aaKnown RBP13.39□□□□□ -0.27
HNRNPC-220ENST00000555585 DISP3Q9P2K9 1392 aa13.39□□□□□ -0.27
HNRNPC-220ENST00000555585 ADAMTS13Q76LX8 1427 aa13.39□□□□□ -0.27
HNRNPC-220ENST00000555585 METP08581 1390 aa13.38□□□□□ -0.27
HNRNPC-220ENST00000555585 SLC26A8Q96RN1 970 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms