RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 RICTORQ6R327 1708 aa32.97■■■□□ 2.87
TMEM260-207ENST00000555497 DIP2CQ9Y2E4 1556 aa32.96■■■□□ 2.87
TMEM260-207ENST00000555497 CFAP70Q5T0N1 1121 aa32.96■■■□□ 2.87
TMEM260-207ENST00000555497 ABCC3O15438 1527 aa32.95■■■□□ 2.87
TMEM260-207ENST00000555497 LRPPRCP42704 1394 aaKnown RBP32.93■■■□□ 2.86
TMEM260-207ENST00000555497 RIMBP3CA6NJZ7 1639 aa32.93■■■□□ 2.86
TMEM260-207ENST00000555497 RIMBP3BA6NNM3 1639 aa32.93■■■□□ 2.86
TMEM260-207ENST00000555497 RIMBP3Q9UFD9 1639 aa32.93■■■□□ 2.86
TMEM260-207ENST00000555497 ADGRB3O60242 1522 aa32.93■■■□□ 2.86
TMEM260-207ENST00000555497 WASHC2CQ9Y4E1 1318 aa32.92■■■□□ 2.86
TMEM260-207ENST00000555497 IRX6P78412 446 aaPredicted RBP32.92■■■□□ 2.86
TMEM260-207ENST00000555497 CC2D1BQ5T0F9 858 aaKnown RBP32.9■■■□□ 2.86
TMEM260-207ENST00000555497 NRXN1Q9ULB1 1477 aa32.9■■■□□ 2.86
TMEM260-207ENST00000555497 GLI2P10070 1586 aa32.89■■■□□ 2.86
TMEM260-207ENST00000555497 SENP3-EIF4A1A0A087X0R7 540 aa32.89■■■□□ 2.86
TMEM260-207ENST00000555497 NLRP13Q86W25 1043 aa32.88■■■□□ 2.85
TMEM260-207ENST00000555497 CHGAP10645 457 aaKnown RBP32.87■■■□□ 2.85
TMEM260-207ENST00000555497 CAMSAP1Q5T5Y3 1602 aa32.87■■■□□ 2.85
TMEM260-207ENST00000555497 YEATS2Q9ULM3 1422 aa32.87■■■□□ 2.85
TMEM260-207ENST00000555497 NOS1P29475 1434 aa32.87■■■□□ 2.85
TMEM260-207ENST00000555497 SIGLEC1Q9BZZ2 1709 aa32.86■■■□□ 2.85
TMEM260-207ENST00000555497 EIF3AQ14152 1382 aaKnown RBP32.83■■■□□ 2.85
TMEM260-207ENST00000555497 PPLO60437 1756 aa32.81■■■□□ 2.84
TMEM260-207ENST00000555497 SMG6Q86US8 1419 aaKnown RBP32.81■■■□□ 2.84
TMEM260-207ENST00000555497 MYOM1P52179 1685 aa32.78■■■□□ 2.84
TMEM260-207ENST00000555497 CDCA8Q53HL2 280 aa32.78■■■□□ 2.84
TMEM260-207ENST00000555497 TSHZ2Q9NRE2 1034 aa32.78■■■□□ 2.84
TMEM260-207ENST00000555497 SYNMO15061 1565 aa32.78■■■□□ 2.84
TMEM260-207ENST00000555497 FAM69CQ0P6D2 419 aa32.78■■■□□ 2.84
TMEM260-207ENST00000555497 DIP2BQ9P265 1576 aa32.75■■■□□ 2.83
TMEM260-207ENST00000555497 PIK3C2BO00750 1634 aa32.74■■■□□ 2.83
TMEM260-207ENST00000555497 PIK3C2GO75747 1445 aa32.73■■■□□ 2.83
TMEM260-207ENST00000555497 NUDCQ9Y266 331 aa32.73■■■□□ 2.83
TMEM260-207ENST00000555497 ERVK-7P63135 1459 aa32.73■■■□□ 2.83
TMEM260-207ENST00000555497 KDM5AP29375 1690 aaKnown RBP32.72■■■□□ 2.83
TMEM260-207ENST00000555497 AMER1Q5JTC6 1135 aaPredicted RBP32.71■■■□□ 2.83
TMEM260-207ENST00000555497 KNSTRNQ9Y448 316 aa32.71■■■□□ 2.83
TMEM260-207ENST00000555497 SETBP1Q9Y6X0 1596 aa32.71■■■□□ 2.83
TMEM260-207ENST00000555497 ARHGAP31Q2M1Z3 1444 aa32.7■■■□□ 2.83
TMEM260-207ENST00000555497 TSPOAP1O95153 1857 aa32.69■■■□□ 2.82
TMEM260-207ENST00000555497 C14orf93Q9H972 538 aaKnown RBP32.69■■■□□ 2.82
TMEM260-207ENST00000555497 MYO3AQ8NEV4 1616 aa32.69■■■□□ 2.82
TMEM260-207ENST00000555497 ZC3H13Q5T200 1668 aaKnown RBP32.69■■■□□ 2.82
TMEM260-207ENST00000555497 RPGRIP1LQ68CZ1 1315 aa32.69■■■□□ 2.82
TMEM260-207ENST00000555497 ZMYM4Q5VZL5 1548 aa32.66■■■□□ 2.82
TMEM260-207ENST00000555497 ERICH6BQ5W0A0 696 aa32.66■■■□□ 2.82
TMEM260-207ENST00000555497 ADGRB1O14514 1584 aa32.65■■■□□ 2.82
TMEM260-207ENST00000555497 ASXL1Q8IXJ9 1541 aa32.63■■■□□ 2.81
TMEM260-207ENST00000555497 IDI1Q13907 227 aa32.62■■■□□ 2.81
TMEM260-207ENST00000555497 TMEM132EQ6IEE7 984 aa32.62■■■□□ 2.81
TMEM260-207ENST00000555497 TRAK1Q9UPV9 953 aa32.62■■■□□ 2.81
TMEM260-207ENST00000555497 NUTM2DQ5VT03 806 aaPredicted RBP32.62■■■□□ 2.81
TMEM260-207ENST00000555497 NEXMIFQ5QGS0 1516 aa32.61■■■□□ 2.81
TMEM260-207ENST00000555497 SLC24A1O60721 1099 aa32.61■■■□□ 2.81
TMEM260-207ENST00000555497 SBNO2Q9Y2G9 1366 aa32.6■■■□□ 2.81
TMEM260-207ENST00000555497 PPP2R1AP30153 589 aa32.6■■■□□ 2.81
TMEM260-207ENST00000555497 CENPJQ9HC77 1338 aaPredicted RBP32.6■■■□□ 2.81
TMEM260-207ENST00000555497 SALL2Q9Y467 1007 aaPredicted RBP32.58■■■□□ 2.81
TMEM260-207ENST00000555497 RNF123Q5XPI4 1314 aa32.57■■■□□ 2.8
TMEM260-207ENST00000555497 PPP4R2Q9NY27 417 aa32.57■■■□□ 2.8
TMEM260-207ENST00000555497 BLMP54132 1417 aaPredicted RBP32.56■■■□□ 2.8
TMEM260-207ENST00000555497 PREX1Q8TCU6 1659 aa32.56■■■□□ 2.8
TMEM260-207ENST00000555497 NPC1L1Q9UHC9 1359 aa32.55■■■□□ 2.8
TMEM260-207ENST00000555497 CARD14Q9BXL6 1004 aa32.54■■■□□ 2.8
TMEM260-207ENST00000555497 INSRP06213 1382 aa32.54■■■□□ 2.8
TMEM260-207ENST00000555497 QRICH2Q9H0J4 1663 aa32.54■■■□□ 2.8
TMEM260-207ENST00000555497 MYO5BQ9ULV0 1848 aa32.54■■■□□ 2.8
TMEM260-207ENST00000555497 VGFO15240 615 aaPredicted RBP32.53■■■□□ 2.8
TMEM260-207ENST00000555497 SLC52A1Q9NWF4 448 aa32.52■■■□□ 2.8
TMEM260-207ENST00000555497 FBXO31Q5XUX0 539 aaPredicted RBP32.5■■■□□ 2.79
TMEM260-207ENST00000555497 ADAMTS8Q9UP79 889 aa32.48■■■□□ 2.79
TMEM260-207ENST00000555497 TMEM131LA2VDJ0 1609 aa32.47■■■□□ 2.79
TMEM260-207ENST00000555497 REREQ9P2R6 1566 aa32.44■■■□□ 2.78
TMEM260-207ENST00000555497 ZFYVE9O95405 1425 aa32.43■■■□□ 2.78
TMEM260-207ENST00000555497 B4GALNT3Q6L9W6 998 aa32.43■■■□□ 2.78
TMEM260-207ENST00000555497 ARHGEF28Q8N1W1 1705 aaKnown RBP32.43■■■□□ 2.78
TMEM260-207ENST00000555497 PDE3BQ13370 1112 aa32.42■■■□□ 2.78
TMEM260-207ENST00000555497 CDCA7LQ96GN5 454 aa32.42■■■□□ 2.78
TMEM260-207ENST00000555497 SENP3Q9H4L4 574 aaPredicted RBP32.41■■■□□ 2.78
TMEM260-207ENST00000555497 AGLP35573 1532 aa32.41■■■□□ 2.78
TMEM260-207ENST00000555497 SLC12A5Q9H2X9 1139 aa32.39■■■□□ 2.78
TMEM260-207ENST00000555497 KIF13AQ9H1H9 1805 aa32.38■■■□□ 2.77
TMEM260-207ENST00000555497 WDR43Q15061 677 aaKnown RBP eCLIP32.36■■■□□ 2.77
TMEM260-207ENST00000555497 CLTCQ00610 1675 aaKnown RBP32.35■■■□□ 2.77
TMEM260-207ENST00000555497 TULP4Q9NRJ4 1543 aa32.33■■■□□ 2.77
TMEM260-207ENST00000555497 NSD3Q9BZ95 1437 aa32.32■■■□□ 2.76
TMEM260-207ENST00000555497 RCAN3Q9UKA8 241 aa32.32■■■□□ 2.76
TMEM260-207ENST00000555497 PPP6R1Q9UPN7 881 aa32.31■■■□□ 2.76
TMEM260-207ENST00000555497 STK26Q9P289 416 aa32.29■■■□□ 2.76
TMEM260-207ENST00000555497 MLECQ14165 292 aa32.28■■■□□ 2.76
TMEM260-207ENST00000555497 EVC2Q86UK5 1308 aa32.27■■■□□ 2.76
TMEM260-207ENST00000555497 SAFB2Q14151 953 aaKnown RBP eCLIP32.27■■■□□ 2.76
TMEM260-207ENST00000555497 PLEKHH1Q9ULM0 1364 aa32.27■■■□□ 2.76
TMEM260-207ENST00000555497 RRP1P56182 461 aaKnown RBP32.27■■■□□ 2.76
TMEM260-207ENST00000555497 RBM19Q9Y4C8 960 aaKnown RBP32.26■■■□□ 2.75
TMEM260-207ENST00000555497 PUS7Q96PZ0 661 aaKnown RBP32.24■■■□□ 2.75
TMEM260-207ENST00000555497 ARHGEF40Q8TER5 1519 aa32.24■■■□□ 2.75
TMEM260-207ENST00000555497 CABP2Q9NPB3 220 aa32.23■■■□□ 2.75
TMEM260-207ENST00000555497 SPATA31D1Q6ZQQ2 1576 aa32.22■■■□□ 2.75
TMEM260-207ENST00000555497 PTPRMP28827 1452 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms