RNA–Protein interactions for RNA: ENST00000555408.5

CDK2-208, Transcript of cyclin dependent kinase 2, humanhuman

TSL 3

Gene CDK2, Length 2,598 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2-208ENST00000555408 ZNF521Q96K83 1311 aa17.15■□□□□ 0.34
CDK2-208ENST00000555408 DMRT2Q9Y5R5 561 aa17.14■□□□□ 0.33
CDK2-208ENST00000555408 PREX2Q70Z35 1606 aa17.14■□□□□ 0.33
CDK2-208ENST00000555408 INSRP06213 1382 aa17.13■□□□□ 0.33
CDK2-208ENST00000555408 FRAT2O75474 233 aaPredicted RBP17.13■□□□□ 0.33
CDK2-208ENST00000555408 TTC37Q6PGP7 1564 aa17.12■□□□□ 0.33
CDK2-208ENST00000555408 IGHDP01880 384 aa17.11■□□□□ 0.33
CDK2-208ENST00000555408 UNC13BO14795 1591 aa17.11■□□□□ 0.33
CDK2-208ENST00000555408 NEUROD2Q15784 382 aa17.1■□□□□ 0.33
CDK2-208ENST00000555408 EIF2AK4Q9P2K8 1649 aaKnown RBP17.09■□□□□ 0.33
CDK2-208ENST00000555408 LAMC1P11047 1609 aa17.09■□□□□ 0.33
CDK2-208ENST00000555408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.08■□□□□ 0.337e-7■■□□□ 14.3
CDK2-208ENST00000555408 TNNT2P45379 298 aaPredicted RBP17.08■□□□□ 0.32
CDK2-208ENST00000555408 IQGAP3Q86VI3 1631 aa17.07■□□□□ 0.32
CDK2-208ENST00000555408 CANXP27824 592 aaKnown RBP17.07■□□□□ 0.32
CDK2-208ENST00000555408 PANK1Q8TE04 598 aa17.07■□□□□ 0.32
CDK2-208ENST00000555408 COG6Q9Y2V7 657 aa17.07■□□□□ 0.32
CDK2-208ENST00000555408 SEC24BO95487 1268 aa17.06■□□□□ 0.32
CDK2-208ENST00000555408 CDCA8Q53HL2 280 aa17.06■□□□□ 0.32
CDK2-208ENST00000555408 AFAP1Q8N556 730 aa17.06■□□□□ 0.32
CDK2-208ENST00000555408 TRMT2AQ8IZ69 625 aaKnown RBP17.05■□□□□ 0.32
CDK2-208ENST00000555408 CFAP70Q5T0N1 1121 aa17.05■□□□□ 0.32
CDK2-208ENST00000555408 RRP7AQ9Y3A4 280 aaKnown RBP17.05■□□□□ 0.32
CDK2-208ENST00000555408 ASXL1Q8IXJ9 1541 aa17.04■□□□□ 0.32
CDK2-208ENST00000555408 CARD14Q9BXL6 1004 aa17.03■□□□□ 0.32
CDK2-208ENST00000555408 DUOX2Q9NRD8 1548 aa17.03■□□□□ 0.32
CDK2-208ENST00000555408 NKTRP30414 1462 aaKnown RBP17.03■□□□□ 0.32
CDK2-208ENST00000555408 E9PSI1 815 aa17.02■□□□□ 0.32
CDK2-208ENST00000555408 TRAPPC8Q9Y2L5 1435 aa17.02■□□□□ 0.32
CDK2-208ENST00000555408 MAST1Q9Y2H9 1570 aa17.02■□□□□ 0.32
CDK2-208ENST00000555408 SCAF11Q99590 1463 aaKnown RBP17.02■□□□□ 0.31
CDK2-208ENST00000555408 ATP10AO60312 1499 aa17.01■□□□□ 0.31
CDK2-208ENST00000555408 SLKQ9H2G2 1235 aaPredicted RBP17.01■□□□□ 0.31
CDK2-208ENST00000555408 RNF17Q9BXT8 1623 aaKnown RBP17.01■□□□□ 0.31
CDK2-208ENST00000555408 EFCAB2Q5VUJ9 269 aa17.01■□□□□ 0.31
CDK2-208ENST00000555408 BCL2L13Q9BXK5 485 aa17.01■□□□□ 0.31
CDK2-208ENST00000555408 PIK3C2GO75747 1445 aa17■□□□□ 0.31
CDK2-208ENST00000555408 TNNQ9UQP3 1299 aa17■□□□□ 0.31
CDK2-208ENST00000555408 MADDQ8WXG6 1647 aa17■□□□□ 0.31
CDK2-208ENST00000555408 CENPJQ9HC77 1338 aaPredicted RBP17■□□□□ 0.31
CDK2-208ENST00000555408 SPAG9O60271 1321 aaKnown RBP16.99■□□□□ 0.31
CDK2-208ENST00000555408 USP19O94966 1318 aa16.99■□□□□ 0.31
CDK2-208ENST00000555408 PLXNC1O60486 1568 aa16.99■□□□□ 0.31
CDK2-208ENST00000555408 CLUAP1Q96AJ1 413 aa16.98■□□□□ 0.31
CDK2-208ENST00000555408 EIF3AQ14152 1382 aaKnown RBP16.98■□□□□ 0.31
CDK2-208ENST00000555408 WWC1Q8IX03 1113 aa16.98■□□□□ 0.31
CDK2-208ENST00000555408 SYNMO15061 1565 aa16.97■□□□□ 0.31
CDK2-208ENST00000555408 PRKCSHP14314 528 aaPredicted RBP16.97■□□□□ 0.31
CDK2-208ENST00000555408 IQGAP1P46940 1657 aa16.97■□□□□ 0.31
CDK2-208ENST00000555408 ADGRF5Q8IZF2 1346 aa16.97■□□□□ 0.31
CDK2-208ENST00000555408 ERCC6L2Q5T890 1561 aa16.96■□□□□ 0.31
CDK2-208ENST00000555408 KIF3BO15066 747 aa16.95■□□□□ 0.3
CDK2-208ENST00000555408 SPRYD3Q8NCJ5 442 aa16.94■□□□□ 0.3
CDK2-208ENST00000555408 ARXQ96QS3 562 aa16.94■□□□□ 0.3
CDK2-208ENST00000555408 POGKQ9P215 609 aa16.94■□□□□ 0.3
CDK2-208ENST00000555408 CGNL1Q0VF96 1302 aa16.94■□□□□ 0.3
CDK2-208ENST00000555408 CHGAP10645 457 aaKnown RBP16.94■□□□□ 0.3
CDK2-208ENST00000555408 PLCH2O75038 1416 aa16.93■□□□□ 0.3
CDK2-208ENST00000555408 MYOM1P52179 1685 aa16.93■□□□□ 0.3
CDK2-208ENST00000555408 RLBP1P12271 317 aa16.93■□□□□ 0.3
CDK2-208ENST00000555408 CLASP1Q7Z460 1538 aa16.93■□□□□ 0.3
CDK2-208ENST00000555408 PDE3AQ14432 1141 aa16.92■□□□□ 0.3
CDK2-208ENST00000555408 PCDHB15Q9Y5E8 787 aa16.92■□□□□ 0.3
CDK2-208ENST00000555408 CLTCL1P53675 1640 aa16.92■□□□□ 0.3
CDK2-208ENST00000555408 MORC1Q86VD1 984 aa16.92■□□□□ 0.3
CDK2-208ENST00000555408 ABCC2Q92887 1545 aa16.91■□□□□ 0.3
CDK2-208ENST00000555408 SCAPERQ9BY12 1400 aa16.91■□□□□ 0.3
CDK2-208ENST00000555408 SLC12A5Q9H2X9 1139 aa16.91■□□□□ 0.3
CDK2-208ENST00000555408 TRAK1Q9UPV9 953 aa16.91■□□□□ 0.3
CDK2-208ENST00000555408 UGGT1Q9NYU2 1555 aa16.91■□□□□ 0.3
CDK2-208ENST00000555408 NPC1L1Q9UHC9 1359 aa16.91■□□□□ 0.3
CDK2-208ENST00000555408 EIF5BO60841 1220 aaKnown RBP16.9■□□□□ 0.3
CDK2-208ENST00000555408 TCP11L2Q8N4U5 519 aa16.9■□□□□ 0.3
CDK2-208ENST00000555408 SENP3Q9H4L4 574 aaPredicted RBP16.9■□□□□ 0.3
CDK2-208ENST00000555408 ERVK-7P63135 1459 aa16.9■□□□□ 0.3
CDK2-208ENST00000555408 RARSP54136 660 aaKnown RBP16.9■□□□□ 0.3
CDK2-208ENST00000555408 TRPM2O94759 1503 aa16.89■□□□□ 0.29
CDK2-208ENST00000555408 MAPK8IP3Q9UPT6 1336 aa16.89■□□□□ 0.29
CDK2-208ENST00000555408 SPHKAPQ2M3C7 1700 aa16.88■□□□□ 0.29
CDK2-208ENST00000555408 BECN1Q14457 450 aa16.88■□□□□ 0.29
CDK2-208ENST00000555408 PDZRN3Q9UPQ7 1066 aa16.88■□□□□ 0.29
CDK2-208ENST00000555408 KDM5AP29375 1690 aaKnown RBP16.88■□□□□ 0.29
CDK2-208ENST00000555408 PTPRTO14522 1441 aa16.87■□□□□ 0.29
CDK2-208ENST00000555408 TMEM132EQ6IEE7 984 aa16.86■□□□□ 0.29
CDK2-208ENST00000555408 MTHFSP49914 203 aa16.85■□□□□ 0.29
CDK2-208ENST00000555408 RUNDC1Q96C34 613 aa16.85■□□□□ 0.29
CDK2-208ENST00000555408 ABCC1P33527 1531 aa16.85■□□□□ 0.29
CDK2-208ENST00000555408 NSD3Q9BZ95 1437 aa16.85■□□□□ 0.29
CDK2-208ENST00000555408 KANK1Q14678 1352 aa16.85■□□□□ 0.29
CDK2-208ENST00000555408 STAC3Q96MF2 364 aa16.84■□□□□ 0.29
CDK2-208ENST00000555408 CEP152O94986 1710 aa16.84■□□□□ 0.29
CDK2-208ENST00000555408 CHD1O14646 1710 aa16.84■□□□□ 0.29
CDK2-208ENST00000555408 NUTM2DQ5VT03 806 aaPredicted RBP16.84■□□□□ 0.29
CDK2-208ENST00000555408 PMFBP1Q8TBY8 1022 aa16.84■□□□□ 0.29
CDK2-208ENST00000555408 UPF2Q9HAU5 1272 aaKnown RBP16.84■□□□□ 0.29
CDK2-208ENST00000555408 TBC1D2Q9BYX2 928 aa16.83■□□□□ 0.28
CDK2-208ENST00000555408 POLR3AO14802 1390 aaPredicted RBP16.83■□□□□ 0.28
CDK2-208ENST00000555408 TSR2Q969E8 191 aaKnown RBP16.81■□□□□ 0.28
CDK2-208ENST00000555408 GZF1Q9H116 711 aaPredicted RBP16.81■□□□□ 0.28
CDK2-208ENST00000555408 U2AF1L5P0DN76 240 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms