RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 ITGAEP38570 1179 aa15.58■□□□□ 0.08
HNRNPC-218ENST00000555215 BCANQ96GW7 911 aa15.58■□□□□ 0.08
HNRNPC-218ENST00000555215 MYO5BQ9ULV0 1848 aa15.58■□□□□ 0.08
HNRNPC-218ENST00000555215 FAM135BQ49AJ0 1406 aa15.58■□□□□ 0.08
HNRNPC-218ENST00000555215 RPRD2Q5VT52 1461 aaKnown RBP15.58■□□□□ 0.08
HNRNPC-218ENST00000555215 PHF23Q9BUL5 403 aaPredicted RBP15.57■□□□□ 0.08
HNRNPC-218ENST00000555215 RIMS2Q9UQ26 1411 aa15.57■□□□□ 0.08
HNRNPC-218ENST00000555215 CHGAP10645 457 aaKnown RBP15.56■□□□□ 0.08
HNRNPC-218ENST00000555215 TMEM131LA2VDJ0 1609 aa15.56■□□□□ 0.08
HNRNPC-218ENST00000555215 UNC13BO14795 1591 aa15.55■□□□□ 0.08
HNRNPC-218ENST00000555215 PLEKHG1Q9ULL1 1385 aa15.55■□□□□ 0.08
HNRNPC-218ENST00000555215 NWD1Q149M9 1564 aa15.54■□□□□ 0.08
HNRNPC-218ENST00000555215 ROCK1Q13464 1354 aa15.54■□□□□ 0.08
HNRNPC-218ENST00000555215 E9PCH4 1651 aa15.54■□□□□ 0.08
HNRNPC-218ENST00000555215 GCC2Q8IWJ2 1684 aa15.54■□□□□ 0.08
HNRNPC-218ENST00000555215 ADAMTS13Q76LX8 1427 aa15.52■□□□□ 0.08
HNRNPC-218ENST00000555215 NUP155O75694 1391 aa15.52■□□□□ 0.08
HNRNPC-218ENST00000555215 PPP1R15AO75807 674 aaPredicted RBP15.52■□□□□ 0.08
HNRNPC-218ENST00000555215 TBX22Q9Y458 520 aa15.52■□□□□ 0.08
HNRNPC-218ENST00000555215 NKTRP30414 1462 aaKnown RBP15.52■□□□□ 0.07
HNRNPC-218ENST00000555215 ROBO1Q9Y6N7 1651 aa15.51■□□□□ 0.07
HNRNPC-218ENST00000555215 SLAIN2Q9P270 581 aa15.5■□□□□ 0.07
HNRNPC-218ENST00000555215 CHD2O14647 1828 aaKnown RBP15.5■□□□□ 0.07
HNRNPC-218ENST00000555215 POTEAQ6S8J7 498 aa15.49■□□□□ 0.07
HNRNPC-218ENST00000555215 IQGAP3Q86VI3 1631 aa15.49■□□□□ 0.07
HNRNPC-218ENST00000555215 PTPRUQ92729 1446 aa15.48■□□□□ 0.07
HNRNPC-218ENST00000555215 MSH6P52701 1360 aa15.48■□□□□ 0.07
HNRNPC-218ENST00000555215 HDGFP51858 240 aaKnown RBP15.47■□□□□ 0.07
HNRNPC-218ENST00000555215 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.47■□□□□ 0.07
HNRNPC-218ENST00000555215 AMOTL2Q9Y2J4 779 aa15.44■□□□□ 0.06
HNRNPC-218ENST00000555215 C14orf37Q86TY3 774 aa15.41■□□□□ 0.06
HNRNPC-218ENST00000555215 C19orf44Q9H6X5 657 aa15.4■□□□□ 0.06
HNRNPC-218ENST00000555215 NCOA3Q9Y6Q9 1424 aa15.4■□□□□ 0.06
HNRNPC-218ENST00000555215 NRXN3Q9Y4C0 1643 aa15.39■□□□□ 0.05
HNRNPC-218ENST00000555215 METP08581 1390 aa15.39■□□□□ 0.05
HNRNPC-218ENST00000555215 PIK3R4Q99570 1358 aa15.39■□□□□ 0.05
HNRNPC-218ENST00000555215 PHLPP1O60346 1717 aa15.39■□□□□ 0.05
HNRNPC-218ENST00000555215 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.39■□□□□ 0.05
HNRNPC-218ENST00000555215 JCADQ9P266 1359 aa15.38■□□□□ 0.05
HNRNPC-218ENST00000555215 ZNF326Q5BKZ1 582 aaKnown RBP15.38■□□□□ 0.05
HNRNPC-218ENST00000555215 COL16A1Q07092 1604 aaPredicted RBP15.38■□□□□ 0.05
HNRNPC-218ENST00000555215 DIP2AQ14689 1571 aa15.37■□□□□ 0.05
HNRNPC-218ENST00000555215 NAIPQ13075 1403 aa15.37■□□□□ 0.05
HNRNPC-218ENST00000555215 RRBP1Q9P2E9 1410 aaKnown RBP15.37■□□□□ 0.05
HNRNPC-218ENST00000555215 LRP6O75581 1613 aa15.37■□□□□ 0.05
HNRNPC-218ENST00000555215 ATF3P18847 181 aa15.36■□□□□ 0.05
HNRNPC-218ENST00000555215 BRINP3Q76B58 766 aa15.36■□□□□ 0.05
HNRNPC-218ENST00000555215 CADPS2Q86UW7 1296 aa15.36■□□□□ 0.05
HNRNPC-218ENST00000555215 TRPM2O94759 1503 aa15.36■□□□□ 0.05
HNRNPC-218ENST00000555215 SPHKAPQ2M3C7 1700 aa15.35■□□□□ 0.05
HNRNPC-218ENST00000555215 CLTCL1P53675 1640 aa15.35■□□□□ 0.05
HNRNPC-218ENST00000555215 SETBP1Q9Y6X0 1596 aa15.34■□□□□ 0.05
HNRNPC-218ENST00000555215 DDX17Q92841 729 aaKnown RBP15.33■□□□□ 0.04
HNRNPC-218ENST00000555215 XRN1Q8IZH2 1706 aaKnown RBP15.33■□□□□ 0.04
HNRNPC-218ENST00000555215 NEXMIFQ5QGS0 1516 aa15.32■□□□□ 0.04
HNRNPC-218ENST00000555215 AHDC1Q5TGY3 1603 aaPredicted RBP15.32■□□□□ 0.04
HNRNPC-218ENST00000555215 MST1RQ04912 1400 aa15.31■□□□□ 0.04
HNRNPC-218ENST00000555215 TRIM52Q96A61 297 aa15.3■□□□□ 0.04
HNRNPC-218ENST00000555215 FOXD1Q16676 465 aa15.29■□□□□ 0.04
HNRNPC-218ENST00000555215 SPATA31A6Q5VVP1 1343 aa15.28■□□□□ 0.04
HNRNPC-218ENST00000555215 NUTM2BA6NNL0 878 aaPredicted RBP15.28■□□□□ 0.04
HNRNPC-218ENST00000555215 NUTM2EB1AL46 878 aaPredicted RBP15.28■□□□□ 0.04
HNRNPC-218ENST00000555215 NUTM2AQ8IVF1 878 aaPredicted RBP15.28■□□□□ 0.04
HNRNPC-218ENST00000555215 SETD1AO15047 1707 aaKnown RBP15.28■□□□□ 0.04
HNRNPC-218ENST00000555215 ASXL1Q8IXJ9 1541 aa15.27■□□□□ 0.03
HNRNPC-218ENST00000555215 HFM1A2PYH4 1435 aa15.26■□□□□ 0.03
HNRNPC-218ENST00000555215 DCCP43146 1447 aa15.26■□□□□ 0.03
HNRNPC-218ENST00000555215 ROBO2Q9HCK4 1378 aa15.26■□□□□ 0.03
HNRNPC-218ENST00000555215 SLC4A1APQ9BWU0 796 aaKnown RBP15.26■□□□□ 0.03
HNRNPC-218ENST00000555215 ADGRL3Q9HAR2 1447 aa15.26■□□□□ 0.03
HNRNPC-218ENST00000555215 MEX3CQ5U5Q3 659 aaKnown RBP15.25■□□□□ 0.03
HNRNPC-218ENST00000555215 SHPRHQ149N8 1683 aa15.24■□□□□ 0.03
HNRNPC-218ENST00000555215 SETD5Q9C0A6 1442 aa15.24■□□□□ 0.03
HNRNPC-218ENST00000555215 ORAI2Q96SN7 254 aa15.23■□□□□ 0.03
HNRNPC-218ENST00000555215 NALCNQ8IZF0 1738 aa15.23■□□□□ 0.03
HNRNPC-218ENST00000555215 KIF1BO60333 1816 aa15.22■□□□□ 0.03
HNRNPC-218ENST00000555215 VGFO15240 615 aaPredicted RBP15.22■□□□□ 0.03
HNRNPC-218ENST00000555215 C1orf167Q5SNV9 1468 aa15.21■□□□□ 0.03
HNRNPC-218ENST00000555215 ZNF772Q68DY9 489 aaPredicted RBP15.21■□□□□ 0.03
HNRNPC-218ENST00000555215 NHSL1Q5SYE7 1610 aa15.21■□□□□ 0.02
HNRNPC-218ENST00000555215 AFF2P51816 1311 aa15.2■□□□□ 0.02
HNRNPC-218ENST00000555215 ADGRF5Q8IZF2 1346 aa15.2■□□□□ 0.02
HNRNPC-218ENST00000555215 LRRC59Q96AG4 307 aaKnown RBP15.2■□□□□ 0.02
HNRNPC-218ENST00000555215 PNPLA6Q8IY17 1366 aa15.2■□□□□ 0.02
HNRNPC-218ENST00000555215 RPGRIP1LQ68CZ1 1315 aa15.18■□□□□ 0.02
HNRNPC-218ENST00000555215 PTCH1Q13635 1447 aa15.18■□□□□ 0.02
HNRNPC-218ENST00000555215 RGL3Q3MIN7 710 aa15.18■□□□□ 0.02
HNRNPC-218ENST00000555215 UPF1Q92900 1129 aaKnown RBP eCLIP15.18■□□□□ 0.02
HNRNPC-218ENST00000555215 RXRBP28702 533 aa15.17■□□□□ 0.02
HNRNPC-218ENST00000555215 C8orf37Q96NL8 207 aa15.16■□□□□ 0.02
HNRNPC-218ENST00000555215 MPHOSPH9Q99550 1183 aa15.16■□□□□ 0.02
HNRNPC-218ENST00000555215 PPLO60437 1756 aa15.16■□□□□ 0.02
HNRNPC-218ENST00000555215 SOS2Q07890 1332 aaPredicted RBP15.16■□□□□ 0.02
HNRNPC-218ENST00000555215 ADAMTS2O95450 1211 aa15.15■□□□□ 0.02
HNRNPC-218ENST00000555215 WAPLQ7Z5K2 1190 aa15.15■□□□□ 0.02
HNRNPC-218ENST00000555215 SPATA31E1Q6ZUB1 1445 aa15.15■□□□□ 0.02
HNRNPC-218ENST00000555215 PRAG1Q86YV5 1406 aa15.15■□□□□ 0.02
HNRNPC-218ENST00000555215 TMEM132EQ6IEE7 984 aa15.14■□□□□ 0.01
HNRNPC-218ENST00000555215 STK26Q9P289 416 aa15.14■□□□□ 0.01
HNRNPC-218ENST00000555215 PLEKHH1Q9ULM0 1364 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms