RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 SUPT5HO00267 1087 aaKnown RBP6.86□□□□□ -1.31
KTN1-220ENST00000555172 STK17AQ9UEE5 414 aa6.86□□□□□ -1.31
KTN1-220ENST00000555172 NBPF26B4DH59 902 aa6.86□□□□□ -1.31
KTN1-220ENST00000555172 TREML4Q6UXN2 200 aa6.86□□□□□ -1.31
KTN1-220ENST00000555172 SWT1Q5T5J6 900 aaKnown RBP6.85□□□□□ -1.31
KTN1-220ENST00000555172 LOC100996750A0A140TA64 210 aa6.83□□□□□ -1.32
KTN1-220ENST00000555172 KRTAP4-6Q9BYQ5 205 aa6.83□□□□□ -1.32
KTN1-220ENST00000555172 HDGFP51858 240 aaKnown RBP6.82□□□□□ -1.32
KTN1-220ENST00000555172 MYT1Q01538 1121 aa6.82□□□□□ -1.32
KTN1-220ENST00000555172 RNF223E7ERA6 249 aa6.82□□□□□ -1.32
KTN1-220ENST00000555172 PPEF1O14829 653 aaPredicted RBP6.82□□□□□ -1.32
KTN1-220ENST00000555172 ZPR1O75312 459 aa6.82□□□□□ -1.32
KTN1-220ENST00000555172 OSBPP22059 807 aa6.81□□□□□ -1.32
KTN1-220ENST00000555172 GGCXP38435 758 aa6.81□□□□□ -1.32
KTN1-220ENST00000555172 SLC19A1P41440 591 aa6.81□□□□□ -1.32
KTN1-220ENST00000555172 SPDYE16A6NNV3 312 aaPredicted RBP6.8□□□□□ -1.32
KTN1-220ENST00000555172 CERKQ8TCT0 537 aa6.8□□□□□ -1.32
KTN1-220ENST00000555172 TLL1O43897 1013 aa6.8□□□□□ -1.32
KTN1-220ENST00000555172 PADI6Q6TGC4 694 aa6.8□□□□□ -1.32
KTN1-220ENST00000555172 PKDCCQ504Y2 493 aa6.79□□□□□ -1.32
KTN1-220ENST00000555172 BLOC1S3Q6QNY0 202 aa6.79□□□□□ -1.32
KTN1-220ENST00000555172 DGAT1O75907 488 aa6.78□□□□□ -1.32
KTN1-220ENST00000555172 TMUB1Q9BVT8 246 aa6.78□□□□□ -1.32
KTN1-220ENST00000555172 NPDC1Q9NQX5 325 aaPredicted RBP6.78□□□□□ -1.32
KTN1-220ENST00000555172 TNFRSF10AO00220 468 aa6.78□□□□□ -1.32
KTN1-220ENST00000555172 SPRYD7Q5W111 196 aa6.78□□□□□ -1.32
KTN1-220ENST00000555172 LIAT1Q6ZQX7 453 aa6.78□□□□□ -1.32
KTN1-220ENST00000555172 PCDHB3Q9Y5E6 796 aa6.77□□□□□ -1.33
KTN1-220ENST00000555172 ST8SIA5O15466 376 aa6.77□□□□□ -1.33
KTN1-220ENST00000555172 UBTFP17480 764 aaKnown RBP6.77□□□□□ -1.33
KTN1-220ENST00000555172 SLF2Q8IX21 1173 aa6.77□□□□□ -1.33
KTN1-220ENST00000555172 TTC13Q8NBP0 860 aa6.77□□□□□ -1.33
KTN1-220ENST00000555172 KCNV2Q8TDN2 545 aa6.77□□□□□ -1.33
KTN1-220ENST00000555172 FAM187AA6NFU0 413 aa6.76□□□□□ -1.33
KTN1-220ENST00000555172 INSM1Q01101 510 aaPredicted RBP6.76□□□□□ -1.33
KTN1-220ENST00000555172 TRIM26Q12899 539 aaPredicted RBP6.76□□□□□ -1.33
KTN1-220ENST00000555172 E2F4Q16254 413 aa6.76□□□□□ -1.33
KTN1-220ENST00000555172 NPM2Q86SE8 214 aaKnown RBP6.76□□□□□ -1.33
KTN1-220ENST00000555172 S1PR4O95977 384 aa6.75□□□□□ -1.33
KTN1-220ENST00000555172 LCE2AQ5TA79 106 aaPredicted RBP6.75□□□□□ -1.33
KTN1-220ENST00000555172 EYA1Q99502 592 aa6.75□□□□□ -1.33
KTN1-220ENST00000555172 ZNF598Q86UK7 904 aaKnown RBP6.75□□□□□ -1.33
KTN1-220ENST00000555172 ZNF697Q5TEC3 545 aa6.74□□□□□ -1.33
KTN1-220ENST00000555172 RBM27Q9P2N5 1060 aaKnown RBP6.73□□□□□ -1.33
KTN1-220ENST00000555172 GDF9O60383 454 aa6.73□□□□□ -1.33
KTN1-220ENST00000555172 PLA2G2CQ5R387 149 aa6.73□□□□□ -1.33
KTN1-220ENST00000555172 ARHGEF1Q92888 912 aaKnown RBP6.72□□□□□ -1.33
KTN1-220ENST00000555172 DACH1Q9UI36 760 aa6.72□□□□□ -1.33
KTN1-220ENST00000555172 PRR20EP86478 221 aa6.71□□□□□ -1.33
KTN1-220ENST00000555172 PRR20CP86479 221 aa6.71□□□□□ -1.33
KTN1-220ENST00000555172 PRR20DP86480 221 aa6.71□□□□□ -1.33
KTN1-220ENST00000555172 PRR20BP86481 221 aa6.71□□□□□ -1.33
KTN1-220ENST00000555172 PRR20AP86496 221 aa6.71□□□□□ -1.33
KTN1-220ENST00000555172 LMOD2Q6P5Q4 547 aa6.71□□□□□ -1.34
KTN1-220ENST00000555172 ANKLE1Q8NAG6 615 aa6.71□□□□□ -1.34
KTN1-220ENST00000555172 AAASQ9NRG9 546 aa6.71□□□□□ -1.34
KTN1-220ENST00000555172 FAM161AQ3B820 660 aa6.7□□□□□ -1.34
KTN1-220ENST00000555172 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.7□□□□□ -1.34
KTN1-220ENST00000555172 NECTIN2Q92692 538 aa6.7□□□□□ -1.34
KTN1-220ENST00000555172 WFS1O76024 890 aa6.69□□□□□ -1.34
KTN1-220ENST00000555172 ARIH1Q9Y4X5 557 aaPredicted RBP6.69□□□□□ -1.34
KTN1-220ENST00000555172 FOXC1Q12948 553 aa6.69□□□□□ -1.34
KTN1-220ENST00000555172 WIPF1O43516 503 aa6.68□□□□□ -1.34
KTN1-220ENST00000555172 HRCP23327 699 aa6.68□□□□□ -1.34
KTN1-220ENST00000555172 SLC4A3P48751 1232 aa6.68□□□□□ -1.34
KTN1-220ENST00000555172 PRR14Q9BWN1 585 aa6.66□□□□□ -1.34
KTN1-220ENST00000555172 PKD2L1Q9P0L9 805 aa6.66□□□□□ -1.34
KTN1-220ENST00000555172 ACTN4O43707 911 aaKnown RBP6.66□□□□□ -1.34
KTN1-220ENST00000555172 CFHP08603 1231 aa6.66□□□□□ -1.34
KTN1-220ENST00000555172 MLLT3P42568 568 aaPredicted RBP6.66□□□□□ -1.34
KTN1-220ENST00000555172 FAM181BA6NEQ2 426 aa6.65□□□□□ -1.34
KTN1-220ENST00000555172 SLC10A3P09131 477 aa6.65□□□□□ -1.34
KTN1-220ENST00000555172 ADH1BP00325 375 aa6.64□□□□□ -1.35
KTN1-220ENST00000555172 DNAJB2P25686 324 aa6.64□□□□□ -1.35
KTN1-220ENST00000555172 TMEM134Q9H6X4 195 aa6.64□□□□□ -1.35
KTN1-220ENST00000555172 GMPR2Q9P2T1 348 aaKnown RBP6.64□□□□□ -1.35
KTN1-220ENST00000555172 PUS10Q3MIT2 529 aaKnown RBP6.64□□□□□ -1.35
KTN1-220ENST00000555172 SMYD5Q6GMV2 418 aa6.64□□□□□ -1.35
KTN1-220ENST00000555172 SLC6A16Q9GZN6 736 aa6.64□□□□□ -1.35
KTN1-220ENST00000555172 RCCD1A6NED2 376 aa6.63□□□□□ -1.35
KTN1-220ENST00000555172 TESPA1A2RU30 521 aaPredicted RBP6.62□□□□□ -1.35
KTN1-220ENST00000555172 SEMA3EO15041 775 aa6.62□□□□□ -1.35
KTN1-220ENST00000555172 KMT5BQ4FZB7 885 aa6.62□□□□□ -1.35
KTN1-220ENST00000555172 ADGRG1Q9Y653 693 aa6.62□□□□□ -1.35
KTN1-220ENST00000555172 SCUBE3Q8IX30 993 aa6.62□□□□□ -1.35
KTN1-220ENST00000555172 PTGDRQ13258 359 aa6.61□□□□□ -1.35
KTN1-220ENST00000555172 C11orf95C9JLR9 678 aaPredicted RBP6.6□□□□□ -1.35
KTN1-220ENST00000555172 BRPF1P55201 1214 aaPredicted RBP6.6□□□□□ -1.35
KTN1-220ENST00000555172 LCE2CQ5TA81 110 aa6.6□□□□□ -1.35
KTN1-220ENST00000555172 RBM46Q8TBY0 533 aaKnown RBP6.6□□□□□ -1.35
KTN1-220ENST00000555172 ZC3H15Q8WU90 426 aaKnown RBP6.6□□□□□ -1.35
KTN1-220ENST00000555172 NR1I2O75469 434 aa6.59□□□□□ -1.35
KTN1-220ENST00000555172 NFX1Q12986 1120 aaKnown RBP6.58□□□□□ -1.36
KTN1-220ENST00000555172 TOR4AQ9NXH8 423 aa6.58□□□□□ -1.36
KTN1-220ENST00000555172 AXIN1O15169 862 aa6.58□□□□□ -1.36
KTN1-220ENST00000555172 SPSB2Q99619 263 aa6.58□□□□□ -1.36
KTN1-220ENST00000555172 CRIPAKQ8N1N5 446 aa6.57□□□□□ -1.36
KTN1-220ENST00000555172 AVPP01185 164 aa6.56□□□□□ -1.36
KTN1-220ENST00000555172 SUZ12Q15022 739 aaKnown RBP6.56□□□□□ -1.36
KTN1-220ENST00000555172 FCF1Q9Y324 198 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms