RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 CYB5RLQ6IPT4 315 aa28.78■■■□□ 2.2
ARHGEF40-204ENST00000555038 ABCA6Q8N139 1617 aa28.75■■■□□ 2.19
ARHGEF40-204ENST00000555038 INSRP06213 1382 aa28.75■■■□□ 2.19
ARHGEF40-204ENST00000555038 ZMYM4Q5VZL5 1548 aa28.74■■■□□ 2.19
ARHGEF40-204ENST00000555038 NRXN1Q9ULB1 1477 aa28.74■■■□□ 2.19
ARHGEF40-204ENST00000555038 ADGRB3O60242 1522 aa28.74■■■□□ 2.19
ARHGEF40-204ENST00000555038 SYNMO15061 1565 aa28.73■■■□□ 2.19
ARHGEF40-204ENST00000555038 CNGB1Q14028 1251 aaPredicted RBP28.73■■■□□ 2.19
ARHGEF40-204ENST00000555038 UGGT1Q9NYU2 1555 aa28.71■■■□□ 2.19
ARHGEF40-204ENST00000555038 TSHZ2Q9NRE2 1034 aa28.7■■■□□ 2.19
ARHGEF40-204ENST00000555038 GLI2P10070 1586 aa28.7■■■□□ 2.18
ARHGEF40-204ENST00000555038 PANK3Q9H999 370 aa28.7■■■□□ 2.18
ARHGEF40-204ENST00000555038 NUDCQ9Y266 331 aa28.69■■■□□ 2.18
ARHGEF40-204ENST00000555038 MROH2AA6NES4 1674 aa28.69■■■□□ 2.18
ARHGEF40-204ENST00000555038 NPATQ14207 1427 aa28.68■■■□□ 2.18
ARHGEF40-204ENST00000555038 ABCC3O15438 1527 aa28.68■■■□□ 2.18
ARHGEF40-204ENST00000555038 DIP2CQ9Y2E4 1556 aa28.66■■■□□ 2.18
ARHGEF40-204ENST00000555038 SETBP1Q9Y6X0 1596 aa28.65■■■□□ 2.18
ARHGEF40-204ENST00000555038 RICTORQ6R327 1708 aa28.64■■■□□ 2.18
ARHGEF40-204ENST00000555038 CAMSAP1Q5T5Y3 1602 aa28.63■■■□□ 2.17
ARHGEF40-204ENST00000555038 MYO3AQ8NEV4 1616 aa28.63■■■□□ 2.17
ARHGEF40-204ENST00000555038 ZC3H13Q5T200 1668 aaKnown RBP28.62■■■□□ 2.17
ARHGEF40-204ENST00000555038 KDM5AP29375 1690 aaKnown RBP28.62■■■□□ 2.17
ARHGEF40-204ENST00000555038 PPP4R2Q9NY27 417 aa28.62■■■□□ 2.17
ARHGEF40-204ENST00000555038 RPGRIP1LQ68CZ1 1315 aa28.62■■■□□ 2.17
ARHGEF40-204ENST00000555038 SBNO2Q9Y2G9 1366 aa28.6■■■□□ 2.17
ARHGEF40-204ENST00000555038 ADGRF5Q8IZF2 1346 aa28.6■■■□□ 2.17
ARHGEF40-204ENST00000555038 PPLO60437 1756 aa28.6■■■□□ 2.17
ARHGEF40-204ENST00000555038 NPC1L1Q9UHC9 1359 aa28.59■■■□□ 2.17
ARHGEF40-204ENST00000555038 NOS1P29475 1434 aa28.59■■■□□ 2.17
ARHGEF40-204ENST00000555038 ARHGAP31Q2M1Z3 1444 aa28.59■■■□□ 2.17
ARHGEF40-204ENST00000555038 RNF123Q5XPI4 1314 aa28.58■■■□□ 2.17
ARHGEF40-204ENST00000555038 MYOM1P52179 1685 aa28.57■■■□□ 2.16
ARHGEF40-204ENST00000555038 GGT6Q6P531 493 aa28.57■■■□□ 2.16
ARHGEF40-204ENST00000555038 CFAP70Q5T0N1 1121 aa28.56■■■□□ 2.16
ARHGEF40-204ENST00000555038 CC2D1BQ5T0F9 858 aaKnown RBP28.55■■■□□ 2.16
ARHGEF40-204ENST00000555038 KNSTRNQ9Y448 316 aa28.55■■■□□ 2.16
ARHGEF40-204ENST00000555038 PIK3C2BO00750 1634 aa28.55■■■□□ 2.16
ARHGEF40-204ENST00000555038 ASXL1Q8IXJ9 1541 aa28.54■■■□□ 2.16
ARHGEF40-204ENST00000555038 PIK3C2GO75747 1445 aa28.54■■■□□ 2.16
ARHGEF40-204ENST00000555038 PDE3BQ13370 1112 aa28.54■■■□□ 2.16
ARHGEF40-204ENST00000555038 RAPGEF3O95398 923 aa28.53■■■□□ 2.16
ARHGEF40-204ENST00000555038 BLMP54132 1417 aaPredicted RBP28.53■■■□□ 2.16
ARHGEF40-204ENST00000555038 IRX6P78412 446 aaPredicted RBP28.52■■■□□ 2.16
ARHGEF40-204ENST00000555038 ERVK-7P63135 1459 aa28.51■■■□□ 2.15
ARHGEF40-204ENST00000555038 AMER1Q5JTC6 1135 aaPredicted RBP28.5■■■□□ 2.15
ARHGEF40-204ENST00000555038 C14orf93Q9H972 538 aaKnown RBP28.47■■■□□ 2.15
ARHGEF40-204ENST00000555038 SIGLEC1Q9BZZ2 1709 aa28.47■■■□□ 2.15
ARHGEF40-204ENST00000555038 ADGRB1O14514 1584 aa28.45■■■□□ 2.15
ARHGEF40-204ENST00000555038 CHGAP10645 457 aaKnown RBP28.44■■■□□ 2.14
ARHGEF40-204ENST00000555038 DIP2BQ9P265 1576 aa28.42■■■□□ 2.14
ARHGEF40-204ENST00000555038 CFAP65Q6ZU64 1925 aaKnown RBP28.42■■■□□ 2.14
ARHGEF40-204ENST00000555038 CENPJQ9HC77 1338 aaPredicted RBP28.42■■■□□ 2.14
ARHGEF40-204ENST00000555038 PPP2R1AP30153 589 aa28.41■■■□□ 2.14
ARHGEF40-204ENST00000555038 YEATS2Q9ULM3 1422 aa28.41■■■□□ 2.14
ARHGEF40-204ENST00000555038 NEXMIFQ5QGS0 1516 aa28.39■■■□□ 2.14
ARHGEF40-204ENST00000555038 REREQ9P2R6 1566 aa28.39■■■□□ 2.14
ARHGEF40-204ENST00000555038 ZFYVE9O95405 1425 aa28.39■■■□□ 2.13
ARHGEF40-204ENST00000555038 SLC52A1Q9NWF4 448 aa28.39■■■□□ 2.13
ARHGEF40-204ENST00000555038 VGFO15240 615 aaPredicted RBP28.37■■■□□ 2.13
ARHGEF40-204ENST00000555038 QRICH2Q9H0J4 1663 aa28.36■■■□□ 2.13
ARHGEF40-204ENST00000555038 PUS7Q96PZ0 661 aaKnown RBP28.34■■■□□ 2.13
ARHGEF40-204ENST00000555038 PREX1Q8TCU6 1659 aa28.33■■■□□ 2.13
ARHGEF40-204ENST00000555038 AGLP35573 1532 aa28.31■■■□□ 2.12
ARHGEF40-204ENST00000555038 PPP6R1Q9UPN7 881 aa28.3■■■□□ 2.12
ARHGEF40-204ENST00000555038 FAM69CQ0P6D2 419 aa28.29■■■□□ 2.12
ARHGEF40-204ENST00000555038 WDR43Q15061 677 aaKnown RBP eCLIP28.29■■■□□ 2.12
ARHGEF40-204ENST00000555038 RCAN3Q9UKA8 241 aa28.27■■■□□ 2.12
ARHGEF40-204ENST00000555038 TRAK1Q9UPV9 953 aa28.27■■■□□ 2.12
ARHGEF40-204ENST00000555038 RBM19Q9Y4C8 960 aaKnown RBP28.27■■■□□ 2.12
ARHGEF40-204ENST00000555038 ADAMTS8Q9UP79 889 aa28.26■■■□□ 2.11
ARHGEF40-204ENST00000555038 ARHGEF28Q8N1W1 1705 aaKnown RBP28.26■■■□□ 2.11
ARHGEF40-204ENST00000555038 TMEM131LA2VDJ0 1609 aa28.25■■■□□ 2.11
ARHGEF40-204ENST00000555038 USP32Q8NFA0 1604 aa28.25■■■□□ 2.11
ARHGEF40-204ENST00000555038 IDI1Q13907 227 aa28.25■■■□□ 2.11
ARHGEF40-204ENST00000555038 B4GALNT3Q6L9W6 998 aa28.25■■■□□ 2.11
ARHGEF40-204ENST00000555038 RRP1P56182 461 aaKnown RBP28.24■■■□□ 2.11
ARHGEF40-204ENST00000555038 CARD14Q9BXL6 1004 aa28.22■■■□□ 2.11
ARHGEF40-204ENST00000555038 SENP3-EIF4A1A0A087X0R7 540 aa28.21■■■□□ 2.11
ARHGEF40-204ENST00000555038 TMEM132EQ6IEE7 984 aa28.19■■■□□ 2.1
ARHGEF40-204ENST00000555038 SALL2Q9Y467 1007 aaPredicted RBP28.18■■■□□ 2.1
ARHGEF40-204ENST00000555038 EVC2Q86UK5 1308 aa28.17■■■□□ 2.1
ARHGEF40-204ENST00000555038 NGEFQ8N5V2 710 aa28.16■■■□□ 2.1
ARHGEF40-204ENST00000555038 POLR3AO14802 1390 aaPredicted RBP28.15■■■□□ 2.1
ARHGEF40-204ENST00000555038 MYO5BQ9ULV0 1848 aa28.15■■■□□ 2.1
ARHGEF40-204ENST00000555038 CCDC136Q96JN2 1154 aa28.15■■■□□ 2.1
ARHGEF40-204ENST00000555038 NSD3Q9BZ95 1437 aa28.15■■■□□ 2.1
ARHGEF40-204ENST00000555038 TSPOAP1O95153 1857 aa28.14■■■□□ 2.1
ARHGEF40-204ENST00000555038 CDCA7LQ96GN5 454 aa28.14■■■□□ 2.09
ARHGEF40-204ENST00000555038 TULP4Q9NRJ4 1543 aa28.14■■■□□ 2.09
ARHGEF40-204ENST00000555038 NINLQ9Y2I6 1382 aa28.13■■■□□ 2.09
ARHGEF40-204ENST00000555038 ZNF521Q96K83 1311 aa28.13■■■□□ 2.09
ARHGEF40-204ENST00000555038 NSD2O96028 1365 aa28.11■■■□□ 2.09
ARHGEF40-204ENST00000555038 ANKRD36BQ8N2N9 1353 aa28.09■■■□□ 2.09
ARHGEF40-204ENST00000555038 SPATA31D1Q6ZQQ2 1576 aa28.09■■■□□ 2.09
ARHGEF40-204ENST00000555038 PLEKHH1Q9ULM0 1364 aa28.09■■■□□ 2.09
ARHGEF40-204ENST00000555038 ARHGEF40Q8TER5 1519 aa28.08■■■□□ 2.09
ARHGEF40-204ENST00000555038 SLC12A5Q9H2X9 1139 aa28.07■■■□□ 2.08
ARHGEF40-204ENST00000555038 CGNL1Q0VF96 1302 aa28.06■■■□□ 2.08
ARHGEF40-204ENST00000555038 KIF13AQ9H1H9 1805 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms