RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 RCCD1A6NED2 376 aa5.64□□□□□ -1.51
SEC23A-208ENST00000555017 TULP1O00294 542 aaPredicted RBP5.64□□□□□ -1.51
SEC23A-208ENST00000555017 FAM98CQ17RN3 349 aaKnown RBP5.64□□□□□ -1.51
SEC23A-208ENST00000555017 NBPF3Q9H094 633 aa5.64□□□□□ -1.51
SEC23A-208ENST00000555017 GOLGA8CPA6NN73 597 aa5.63□□□□□ -1.51
SEC23A-208ENST00000555017 NBPF26B4DH59 902 aa5.63□□□□□ -1.51
SEC23A-208ENST00000555017 SWT1Q5T5J6 900 aaKnown RBP5.63□□□□□ -1.51
SEC23A-208ENST00000555017 THSD4Q6ZMP0 1018 aa5.63□□□□□ -1.51
SEC23A-208ENST00000555017 BARGINQ6ZT62 677 aa5.63□□□□□ -1.51
SEC23A-208ENST00000555017 METTL3Q86U44 580 aaKnown RBP5.63□□□□□ -1.51
SEC23A-208ENST00000555017 PXYLP1Q8TE99 480 aa5.63□□□□□ -1.51
SEC23A-208ENST00000555017 IRF6O14896 467 aa5.62□□□□□ -1.51
SEC23A-208ENST00000555017 PRKCSHP14314 528 aaPredicted RBP5.62□□□□□ -1.51
SEC23A-208ENST00000555017 LAPTM4BQ86VI4 370 aa5.62□□□□□ -1.51
SEC23A-208ENST00000555017 CCDC102AQ96A19 550 aa5.62□□□□□ -1.51
SEC23A-208ENST00000555017 SLC24A3Q9HC58 644 aa5.62□□□□□ -1.51
SEC23A-208ENST00000555017 CC2D2AQ9P2K1 1620 aa5.62□□□□□ -1.51
SEC23A-208ENST00000555017 MAP2K5Q13163 448 aa5.61□□□□□ -1.51
SEC23A-208ENST00000555017 IFFO2Q5TF58 517 aa5.61□□□□□ -1.51
SEC23A-208ENST00000555017 KRI1Q8N9T8 703 aaKnown RBP5.61□□□□□ -1.51
SEC23A-208ENST00000555017 REPIN1Q9BWE0 567 aaKnown RBP5.61□□□□□ -1.51
SEC23A-208ENST00000555017 BAZ1AQ9NRL2 1556 aaPredicted RBP5.61□□□□□ -1.51
SEC23A-208ENST00000555017 WBP1LQ9NX94 342 aa5.61□□□□□ -1.51
SEC23A-208ENST00000555017 SOWAHBA6NEL2 793 aa5.6□□□□□ -1.51
SEC23A-208ENST00000555017 RBM46Q8TBY0 533 aaKnown RBP5.6□□□□□ -1.51
SEC23A-208ENST00000555017 MINK1Q8N4C8 1332 aaPredicted RBP5.59□□□□□ -1.51
SEC23A-208ENST00000555017 RNF40O75150 1001 aa5.59□□□□□ -1.51
SEC23A-208ENST00000555017 ANKK1Q8NFD2 765 aa5.59□□□□□ -1.51
SEC23A-208ENST00000555017 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.59□□□□□ -1.51
SEC23A-208ENST00000555017 HPS5Q9UPZ3 1129 aa5.59□□□□□ -1.51
SEC23A-208ENST00000555017 OATP04181 439 aa5.58□□□□□ -1.52
SEC23A-208ENST00000555017 SLC10A3P09131 477 aa5.58□□□□□ -1.52
SEC23A-208ENST00000555017 MDM2Q00987 491 aaPredicted RBP5.58□□□□□ -1.52
SEC23A-208ENST00000555017 TPRNQ4KMQ1 711 aa5.58□□□□□ -1.52
SEC23A-208ENST00000555017 LRCH3Q96II8 777 aa5.58□□□□□ -1.52
SEC23A-208ENST00000555017 TMEM134Q9H6X4 195 aa5.58□□□□□ -1.52
SEC23A-208ENST00000555017 DNAJB2P25686 324 aa5.57□□□□□ -1.52
SEC23A-208ENST00000555017 ATAD2BQ9ULI0 1458 aa5.57□□□□□ -1.52
SEC23A-208ENST00000555017 TRIM66O15016 1216 aa5.56□□□□□ -1.52
SEC23A-208ENST00000555017 APLP1P51693 650 aa5.56□□□□□ -1.52
SEC23A-208ENST00000555017 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.55□□□□□ -1.52
SEC23A-208ENST00000555017 A0A0G2JS52 829 aa5.55□□□□□ -1.52
SEC23A-208ENST00000555017 PPP4CP60510 307 aa5.55□□□□□ -1.52
SEC23A-208ENST00000555017 TSR3Q9UJK0 312 aaKnown RBP5.55□□□□□ -1.52
SEC23A-208ENST00000555017 DDX11L8A8MPP1 907 aa5.54□□□□□ -1.52
SEC23A-208ENST00000555017 TMUB1Q9BVT8 246 aa5.54□□□□□ -1.52
SEC23A-208ENST00000555017 TRAF7Q6Q0C0 670 aa5.53□□□□□ -1.52
SEC23A-208ENST00000555017 DAXXQ9UER7 740 aaPredicted RBP5.53□□□□□ -1.52
SEC23A-208ENST00000555017 PEG3Q9GZU2 1588 aa5.53□□□□□ -1.52
SEC23A-208ENST00000555017 TOP2AP11388 1531 aaKnown RBP5.53□□□□□ -1.52
SEC23A-208ENST00000555017 BAZ1BQ9UIG0 1483 aaKnown RBP5.52□□□□□ -1.53
SEC23A-208ENST00000555017 SMARCA2P51531 1590 aa5.52□□□□□ -1.53
SEC23A-208ENST00000555017 HDGFP51858 240 aaKnown RBP5.52□□□□□ -1.53
SEC23A-208ENST00000555017 AK7Q96M32 723 aa5.52□□□□□ -1.53
SEC23A-208ENST00000555017 LCE2BO14633 110 aa5.51□□□□□ -1.53
SEC23A-208ENST00000555017 CFHP08603 1231 aa5.51□□□□□ -1.53
SEC23A-208ENST00000555017 PDE4DQ08499 809 aa5.51□□□□□ -1.53
SEC23A-208ENST00000555017 PUS10Q3MIT2 529 aaKnown RBP5.51□□□□□ -1.53
SEC23A-208ENST00000555017 SLF2Q8IX21 1173 aa5.51□□□□□ -1.53
SEC23A-208ENST00000555017 PARP9Q8IXQ6 854 aa5.51□□□□□ -1.53
SEC23A-208ENST00000555017 ZNF516Q92618 1163 aa5.51□□□□□ -1.53
SEC23A-208ENST00000555017 CCDC88BA6NC98 1476 aa5.51□□□□□ -1.53
SEC23A-208ENST00000555017 MS4A1P11836 297 aa5.5□□□□□ -1.53
SEC23A-208ENST00000555017 TTLL12Q14166 644 aaPredicted RBP5.5□□□□□ -1.53
SEC23A-208ENST00000555017 LAPTM4AQ15012 233 aa5.5□□□□□ -1.53
SEC23A-208ENST00000555017 AMHR2Q16671 573 aa5.5□□□□□ -1.53
SEC23A-208ENST00000555017 RDH13Q8NBN7 331 aa5.5□□□□□ -1.53
SEC23A-208ENST00000555017 HLA-CQ95604 372 aa5.5□□□□□ -1.53
SEC23A-208ENST00000555017 GPBP1L1Q9HC44 474 aaPredicted RBP5.5□□□□□ -1.53
SEC23A-208ENST00000555017 GPCPD1Q9NPB8 672 aa5.5□□□□□ -1.53
SEC23A-208ENST00000555017 FAM217BQ9NTX9 383 aaPredicted RBP5.5□□□□□ -1.53
SEC23A-208ENST00000555017 NCAPD3P42695 1498 aa5.5□□□□□ -1.53
SEC23A-208ENST00000555017 CD46P15529 392 aa5.49□□□□□ -1.53
SEC23A-208ENST00000555017 SSTR3P32745 418 aaPredicted RBP5.49□□□□□ -1.53
SEC23A-208ENST00000555017 COPS2P61201 443 aa5.49□□□□□ -1.53
SEC23A-208ENST00000555017 TJAP1Q5JTD0 557 aa5.49□□□□□ -1.53
SEC23A-208ENST00000555017 BLOC1S3Q6QNY0 202 aa5.49□□□□□ -1.53
SEC23A-208ENST00000555017 GIGYF2Q6Y7W6 1299 aaKnown RBP5.49□□□□□ -1.53
SEC23A-208ENST00000555017 NKX2-3Q8TAU0 364 aa5.49□□□□□ -1.53
SEC23A-208ENST00000555017 GCGRP47871 477 aa5.48□□□□□ -1.53
SEC23A-208ENST00000555017 ZNF775Q96BV0 537 aaPredicted RBP5.48□□□□□ -1.53
SEC23A-208ENST00000555017 MTRQ99707 1265 aa5.48□□□□□ -1.53
SEC23A-208ENST00000555017 NESP48681 1621 aa5.48□□□□□ -1.53
SEC23A-208ENST00000555017 HMGXB3Q12766 1538 aa5.48□□□□□ -1.53
SEC23A-208ENST00000555017 CLCN1P35523 988 aa5.47□□□□□ -1.53
SEC23A-208ENST00000555017 GUCA2AQ02747 115 aa5.47□□□□□ -1.53
SEC23A-208ENST00000555017 FUT2Q10981 343 aa5.47□□□□□ -1.53
SEC23A-208ENST00000555017 ACTN4O43707 911 aaKnown RBP5.46□□□□□ -1.54
SEC23A-208ENST00000555017 TLL1O43897 1013 aa5.46□□□□□ -1.54
SEC23A-208ENST00000555017 NDUFV2P19404 249 aa5.45□□□□□ -1.54
SEC23A-208ENST00000555017 ZNF787Q6DD87 383 aa5.45□□□□□ -1.54
SEC23A-208ENST00000555017 PCDHB3Q9Y5E6 796 aa5.45□□□□□ -1.54
SEC23A-208ENST00000555017 SCUBE3Q8IX30 993 aa5.44□□□□□ -1.54
SEC23A-208ENST00000555017 SYMPKQ92797 1274 aaKnown RBP5.44□□□□□ -1.54
SEC23A-208ENST00000555017 BEGAINQ9BUH8 593 aa5.44□□□□□ -1.54
SEC23A-208ENST00000555017 FAM117AQ9C073 453 aa5.44□□□□□ -1.54
SEC23A-208ENST00000555017 KDM4CQ9H3R0 1056 aa5.44□□□□□ -1.54
SEC23A-208ENST00000555017 SLC27A5Q9Y2P5 690 aa5.44□□□□□ -1.54
SEC23A-208ENST00000555017 ITGBL1O95965 494 aaPredicted RBP5.43□□□□□ -1.54
SEC23A-208ENST00000555017 BRPF1P55201 1214 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms