RNA–Protein interactions for RNA: ENST00000554938.1

LIN52-204, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 4

Gene LIN52, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-204ENST00000554938 SLC24A1O60721 1099 aa13.28□□□□□ -0.28
LIN52-204ENST00000554938 IQGAP1P46940 1657 aa13.28□□□□□ -0.28
LIN52-204ENST00000554938 TMF1P82094 1093 aa13.27□□□□□ -0.29
LIN52-204ENST00000554938 PREX1Q8TCU6 1659 aa13.27□□□□□ -0.29
LIN52-204ENST00000554938 PIK3C2BO00750 1634 aa13.26□□□□□ -0.29
LIN52-204ENST00000554938 SCAF11Q99590 1463 aaKnown RBP13.26□□□□□ -0.29
LIN52-204ENST00000554938 PRKRIP1Q9H875 184 aaPredicted RBP13.26□□□□□ -0.29
LIN52-204ENST00000554938 SYNMO15061 1565 aa13.25□□□□□ -0.29
LIN52-204ENST00000554938 ARHGEF40Q8TER5 1519 aa13.25□□□□□ -0.29
LIN52-204ENST00000554938 COL17A1Q9UMD9 1497 aaPredicted RBP13.25□□□□□ -0.29
LIN52-204ENST00000554938 ADGRF5Q8IZF2 1346 aa13.25□□□□□ -0.29
LIN52-204ENST00000554938 EIF3AQ14152 1382 aaKnown RBP13.24□□□□□ -0.29
LIN52-204ENST00000554938 VGFO15240 615 aaPredicted RBP13.24□□□□□ -0.29
LIN52-204ENST00000554938 CDCA8Q53HL2 280 aa13.24□□□□□ -0.29
LIN52-204ENST00000554938 CFAP70Q5T0N1 1121 aa13.24□□□□□ -0.29
LIN52-204ENST00000554938 ESF1Q9H501 851 aaKnown RBP13.24□□□□□ -0.29
LIN52-204ENST00000554938 CLTCQ00610 1675 aaKnown RBP13.24□□□□□ -0.29
LIN52-204ENST00000554938 NRXN1Q9ULB1 1477 aa13.23□□□□□ -0.29
LIN52-204ENST00000554938 IDI1Q13907 227 aa13.23□□□□□ -0.29
LIN52-204ENST00000554938 TESK2Q96S53 571 aa13.23□□□□□ -0.29
LIN52-204ENST00000554938 MYO5BQ9ULV0 1848 aa13.21□□□□□ -0.29
LIN52-204ENST00000554938 MLECQ14165 292 aa13.21□□□□□ -0.29
LIN52-204ENST00000554938 C14orf93Q9H972 538 aaKnown RBP13.21□□□□□ -0.29
LIN52-204ENST00000554938 SETBP1Q9Y6X0 1596 aa13.2□□□□□ -0.3
LIN52-204ENST00000554938 ERVK-7P63135 1459 aa13.19□□□□□ -0.3
LIN52-204ENST00000554938 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
LIN52-204ENST00000554938 KTN1Q86UP2 1357 aaKnown RBP13.19□□□□□ -0.3
LIN52-204ENST00000554938 FBXO31Q5XUX0 539 aaPredicted RBP13.18□□□□□ -0.3
LIN52-204ENST00000554938 ZFYVE9O95405 1425 aa13.18□□□□□ -0.3
LIN52-204ENST00000554938 DISP3Q9P2K9 1392 aa13.18□□□□□ -0.3
LIN52-204ENST00000554938 NEXMIFQ5QGS0 1516 aa13.18□□□□□ -0.3
LIN52-204ENST00000554938 TMEM131LA2VDJ0 1609 aa13.17□□□□□ -0.3
LIN52-204ENST00000554938 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
LIN52-204ENST00000554938 PIK3C2GO75747 1445 aa13.17□□□□□ -0.3
LIN52-204ENST00000554938 RALBP1Q15311 655 aa13.17□□□□□ -0.3
LIN52-204ENST00000554938 MRS2Q9HD23 443 aa13.17□□□□□ -0.3
LIN52-204ENST00000554938 GTF3C3Q9Y5Q9 886 aa13.16□□□□□ -0.3
LIN52-204ENST00000554938 SPATA31D1Q6ZQQ2 1576 aa13.15□□□□□ -0.3
LIN52-204ENST00000554938 MYO3AQ8NEV4 1616 aa13.14□□□□□ -0.31
LIN52-204ENST00000554938 PANK3Q9H999 370 aa13.14□□□□□ -0.31
LIN52-204ENST00000554938 ZMYM3Q14202 1370 aa13.14□□□□□ -0.31
LIN52-204ENST00000554938 KDM5AP29375 1690 aaKnown RBP13.14□□□□□ -0.31
LIN52-204ENST00000554938 CENPJQ9HC77 1338 aaPredicted RBP13.13□□□□□ -0.31
LIN52-204ENST00000554938 PER1O15534 1290 aaPredicted RBP13.12□□□□□ -0.31
LIN52-204ENST00000554938 CNGB1Q14028 1251 aaPredicted RBP13.12□□□□□ -0.31
LIN52-204ENST00000554938 NUTM2DQ5VT03 806 aaPredicted RBP13.12□□□□□ -0.31
LIN52-204ENST00000554938 TRAK1Q9UPV9 953 aa13.12□□□□□ -0.31
LIN52-204ENST00000554938 HDGFP51858 240 aaKnown RBP13.11□□□□□ -0.31
LIN52-204ENST00000554938 CCDC184Q52MB2 194 aa13.11□□□□□ -0.31
LIN52-204ENST00000554938 MYBBP1AQ9BQG0 1328 aaKnown RBP13.11□□□□□ -0.31
LIN52-204ENST00000554938 SBNO2Q9Y2G9 1366 aa13.1□□□□□ -0.31
LIN52-204ENST00000554938 KDM4FA0A1W2PPD8 638 aa13.1□□□□□ -0.31
LIN52-204ENST00000554938 TMEM132EQ6IEE7 984 aa13.1□□□□□ -0.31
LIN52-204ENST00000554938 FAM9BQ8IZU0 186 aa13.1□□□□□ -0.31
LIN52-204ENST00000554938 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.1□□□□□ -0.31
LIN52-204ENST00000554938 ADGRB1O14514 1584 aa13.1□□□□□ -0.31
LIN52-204ENST00000554938 HNRNPUQ00839 825 aaKnown RBP eCLIP13.09□□□□□ -0.31
LIN52-204ENST00000554938 TMC1Q8TDI8 760 aa13.09□□□□□ -0.31
LIN52-204ENST00000554938 KNSTRNQ9Y448 316 aa13.09□□□□□ -0.31
LIN52-204ENST00000554938 QRICH2Q9H0J4 1663 aa13.08□□□□□ -0.31
LIN52-204ENST00000554938 BRD4O60885 1362 aaPredicted RBP13.08□□□□□ -0.31
LIN52-204ENST00000554938 TNRQ92752 1358 aa13.07□□□□□ -0.32
LIN52-204ENST00000554938 PUS7Q96PZ0 661 aaKnown RBP13.07□□□□□ -0.32
LIN52-204ENST00000554938 A2ML1A8K2U0 1454 aa13.07□□□□□ -0.32
LIN52-204ENST00000554938 RIMS2Q9UQ26 1411 aa13.06□□□□□ -0.32
LIN52-204ENST00000554938 ARHGEF28Q8N1W1 1705 aaKnown RBP13.06□□□□□ -0.32
LIN52-204ENST00000554938 PARD3Q8TEW0 1356 aa13.06□□□□□ -0.32
LIN52-204ENST00000554938 NLRP13Q86W25 1043 aa13.05□□□□□ -0.32
LIN52-204ENST00000554938 ALKQ9UM73 1620 aa13.04□□□□□ -0.32
LIN52-204ENST00000554938 CC2D1BQ5T0F9 858 aaKnown RBP13.04□□□□□ -0.32
LIN52-204ENST00000554938 MYOM1P52179 1685 aa13.04□□□□□ -0.32
LIN52-204ENST00000554938 EVC2Q86UK5 1308 aa13.04□□□□□ -0.32
LIN52-204ENST00000554938 FER1L4A9Z1Z3 1794 aa13.02□□□□□ -0.32
LIN52-204ENST00000554938 PNISRQ8TF01 805 aaKnown RBP13.02□□□□□ -0.33
LIN52-204ENST00000554938 POGKQ9P215 609 aa13.02□□□□□ -0.33
LIN52-204ENST00000554938 STK26Q9P289 416 aa13.02□□□□□ -0.33
LIN52-204ENST00000554938 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
LIN52-204ENST00000554938 ASXL1Q8IXJ9 1541 aa13.02□□□□□ -0.33
LIN52-204ENST00000554938 YTHDC2Q9H6S0 1430 aaKnown RBP13.01□□□□□ -0.33
LIN52-204ENST00000554938 UBR1Q8IWV7 1749 aa13□□□□□ -0.33
LIN52-204ENST00000554938 C3P01024 1663 aa13□□□□□ -0.33
LIN52-204ENST00000554938 NLRP1Q9C000 1473 aa12.99□□□□□ -0.33
LIN52-204ENST00000554938 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
LIN52-204ENST00000554938 SENP3Q9H4L4 574 aaPredicted RBP12.99□□□□□ -0.33
LIN52-204ENST00000554938 ZBED9Q6R2W3 1325 aa12.98□□□□□ -0.33
LIN52-204ENST00000554938 LRPPRCP42704 1394 aaKnown RBP12.97□□□□□ -0.33
LIN52-204ENST00000554938 CEBPAP49715 358 aaPredicted RBP12.97□□□□□ -0.33
LIN52-204ENST00000554938 BCANQ96GW7 911 aa12.97□□□□□ -0.33
LIN52-204ENST00000554938 DLC1Q96QB1 1528 aa12.97□□□□□ -0.33
LIN52-204ENST00000554938 TMEM2Q9UHN6 1383 aa12.96□□□□□ -0.33
LIN52-204ENST00000554938 SAFB2Q14151 953 aaKnown RBP eCLIP12.96□□□□□ -0.33
LIN52-204ENST00000554938 PRAM1Q96QH2 718 aa12.96□□□□□ -0.33
LIN52-204ENST00000554938 PTPRMP28827 1452 aa12.96□□□□□ -0.34
LIN52-204ENST00000554938 SETD1AO15047 1707 aaKnown RBP12.96□□□□□ -0.34
LIN52-204ENST00000554938 ABCC11Q96J66 1382 aa12.95□□□□□ -0.34
LIN52-204ENST00000554938 PPP2R1AP30153 589 aa12.95□□□□□ -0.34
LIN52-204ENST00000554938 SIRT1Q96EB6 747 aa12.95□□□□□ -0.34
LIN52-204ENST00000554938 SLC12A5Q9H2X9 1139 aa12.95□□□□□ -0.34
LIN52-204ENST00000554938 EID1Q9Y6B2 187 aa12.95□□□□□ -0.34
LIN52-204ENST00000554938 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms