RNA–Protein interactions for RNA: ENST00000554843.5

PSMA6-208, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-208ENST00000554843 TONSLQ96HA7 1378 aa21.49■■□□□ 1.03
PSMA6-208ENST00000554843 RIMS2Q9UQ26 1411 aa21.49■■□□□ 1.03
PSMA6-208ENST00000554843 TIMELESSQ9UNS1 1208 aa21.47■■□□□ 1.03
PSMA6-208ENST00000554843 ZNF326Q5BKZ1 582 aaKnown RBP21.46■■□□□ 1.03
PSMA6-208ENST00000554843 RGL3Q3MIN7 710 aa21.45■■□□□ 1.02
PSMA6-208ENST00000554843 SCAF11Q99590 1463 aaKnown RBP21.45■■□□□ 1.02
PSMA6-208ENST00000554843 POLR1AO95602 1720 aaPredicted RBP21.44■■□□□ 1.02
PSMA6-208ENST00000554843 STAC3Q96MF2 364 aa21.44■■□□□ 1.02
PSMA6-208ENST00000554843 NRXN1Q9ULB1 1477 aa21.43■■□□□ 1.02
PSMA6-208ENST00000554843 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.42■■□□□ 1.02
PSMA6-208ENST00000554843 L3MBTL2Q969R5 705 aa21.42■■□□□ 1.02
PSMA6-208ENST00000554843 HDGFP51858 240 aaKnown RBP21.41■■□□□ 1.02
PSMA6-208ENST00000554843 EID1Q9Y6B2 187 aa21.39■■□□□ 1.01
PSMA6-208ENST00000554843 SETBP1Q9Y6X0 1596 aa21.39■■□□□ 1.01
PSMA6-208ENST00000554843 MED14O60244 1454 aa21.39■■□□□ 1.01
PSMA6-208ENST00000554843 PIK3C2GO75747 1445 aa21.38■■□□□ 1.01
PSMA6-208ENST00000554843 PLEKHG1Q9ULL1 1385 aa21.38■■□□□ 1.01
PSMA6-208ENST00000554843 DCAF11Q8TEB1 546 aa21.38■■□□□ 1.01
PSMA6-208ENST00000554843 VGFO15240 615 aaPredicted RBP21.37■■□□□ 1.01
PSMA6-208ENST00000554843 LTKP29376 864 aa21.37■■□□□ 1.01
PSMA6-208ENST00000554843 HSPA2P54652 639 aa21.37■■□□□ 1.01
PSMA6-208ENST00000554843 ANKLE2Q86XL3 938 aa21.37■■□□□ 1.01
PSMA6-208ENST00000554843 PRAG1Q86YV5 1406 aa21.37■■□□□ 1.01
PSMA6-208ENST00000554843 PPP1R15AO75807 674 aaPredicted RBP21.36■■□□□ 1.01
PSMA6-208ENST00000554843 TXNDC2Q86VQ3 553 aa21.36■■□□□ 1.01
PSMA6-208ENST00000554843 NRXN3Q9Y4C0 1643 aa21.36■■□□□ 1.01
PSMA6-208ENST00000554843 LAMC1P11047 1609 aa21.35■■□□□ 1.01
PSMA6-208ENST00000554843 STRCQ7RTU9 1775 aa21.35■■□□□ 1.01
PSMA6-208ENST00000554843 IQGAP1P46940 1657 aa21.34■■□□□ 1.01
PSMA6-208ENST00000554843 ADGRF5Q8IZF2 1346 aa21.34■■□□□ 1.01
PSMA6-208ENST00000554843 DIP2AQ14689 1571 aa21.33■■□□□ 1.01
PSMA6-208ENST00000554843 NPHP4O75161 1426 aaPredicted RBP21.33■■□□□ 1.01
PSMA6-208ENST00000554843 KIAA1210Q9ULL0 1709 aa21.32■■□□□ 1
PSMA6-208ENST00000554843 NUTM2DQ5VT03 806 aaPredicted RBP21.32■■□□□ 1
PSMA6-208ENST00000554843 SETD1AO15047 1707 aaKnown RBP21.31■■□□□ 1
PSMA6-208ENST00000554843 ADAMTS13Q76LX8 1427 aa21.3■■□□□ 1
PSMA6-208ENST00000554843 KDM2AQ9Y2K7 1162 aa21.3■■□□□ 1
PSMA6-208ENST00000554843 TRPM1Q7Z4N2 1603 aa21.29■■□□□ 1
PSMA6-208ENST00000554843 NCKAP5LQ9HCH0 1330 aa21.29■■□□□ 1
PSMA6-208ENST00000554843 ALKQ9UM73 1620 aa21.28■■□□□ 1
PSMA6-208ENST00000554843 RALGAPBQ86X10 1494 aa21.27■■□□□ 1
PSMA6-208ENST00000554843 ZEB1P37275 1124 aaPredicted RBP21.27■■□□□ 1
PSMA6-208ENST00000554843 ASXL1Q8IXJ9 1541 aa21.25■□□□□ 0.99
PSMA6-208ENST00000554843 NBPF8Q3BBV2 869 aa21.24■□□□□ 0.99
PSMA6-208ENST00000554843 C14orf93Q9H972 538 aaKnown RBP21.24■□□□□ 0.99
PSMA6-208ENST00000554843 ADGRB1O14514 1584 aa21.23■□□□□ 0.99
PSMA6-208ENST00000554843 PIK3R4Q99570 1358 aa21.22■□□□□ 0.99
PSMA6-208ENST00000554843 TBX22Q9Y458 520 aa21.21■□□□□ 0.99
PSMA6-208ENST00000554843 GPRASP1Q5JY77 1395 aa21.21■□□□□ 0.99
PSMA6-208ENST00000554843 BCANQ96GW7 911 aa21.2■□□□□ 0.98
PSMA6-208ENST00000554843 CFAP70Q5T0N1 1121 aa21.19■□□□□ 0.98
PSMA6-208ENST00000554843 NWD1Q149M9 1564 aa21.19■□□□□ 0.98
PSMA6-208ENST00000554843 DMRT2Q9Y5R5 561 aa21.18■□□□□ 0.98
PSMA6-208ENST00000554843 SLC26A8Q96RN1 970 aa21.17■□□□□ 0.98
PSMA6-208ENST00000554843 ROCK2O75116 1388 aaKnown RBP21.17■□□□□ 0.98
PSMA6-208ENST00000554843 KNDC1Q76NI1 1749 aa21.17■□□□□ 0.98
PSMA6-208ENST00000554843 XRN1Q8IZH2 1706 aaKnown RBP21.16■□□□□ 0.98
PSMA6-208ENST00000554843 METP08581 1390 aa21.16■□□□□ 0.98
PSMA6-208ENST00000554843 TECPR2O15040 1411 aa21.14■□□□□ 0.98
PSMA6-208ENST00000554843 CHD2O14647 1828 aaKnown RBP21.14■□□□□ 0.97
PSMA6-208ENST00000554843 SENP3Q9H4L4 574 aaPredicted RBP21.14■□□□□ 0.97
PSMA6-208ENST00000554843 YTHDC2Q9H6S0 1430 aaKnown RBP21.13■□□□□ 0.97
PSMA6-208ENST00000554843 LRPPRCP42704 1394 aaKnown RBP21.13■□□□□ 0.97
PSMA6-208ENST00000554843 PTPRUQ92729 1446 aa21.12■□□□□ 0.97
PSMA6-208ENST00000554843 NBPF1Q3BBV0 1214 aa21.12■□□□□ 0.97
PSMA6-208ENST00000554843 CPS1P31327 1500 aa21.12■□□□□ 0.97
PSMA6-208ENST00000554843 DLC1Q96QB1 1528 aa21.12■□□□□ 0.97
PSMA6-208ENST00000554843 NKTRP30414 1462 aaKnown RBP21.11■□□□□ 0.97
PSMA6-208ENST00000554843 PTCH1Q13635 1447 aa21.11■□□□□ 0.97
PSMA6-208ENST00000554843 ABCC11Q96J66 1382 aa21.1■□□□□ 0.97
PSMA6-208ENST00000554843 TMEM132EQ6IEE7 984 aa21.09■□□□□ 0.97
PSMA6-208ENST00000554843 ARHGEF28Q8N1W1 1705 aaKnown RBP21.09■□□□□ 0.97
PSMA6-208ENST00000554843 CARD11Q9BXL7 1154 aa21.07■□□□□ 0.96
PSMA6-208ENST00000554843 STRCP1A6NGW2 1772 aa21.06■□□□□ 0.96
PSMA6-208ENST00000554843 KCNA6P17658 529 aa21.06■□□□□ 0.96
PSMA6-208ENST00000554843 EIF3AQ14152 1382 aaKnown RBP21.05■□□□□ 0.96
PSMA6-208ENST00000554843 FAM135BQ49AJ0 1406 aa21.04■□□□□ 0.96
PSMA6-208ENST00000554843 AMOTL2Q9Y2J4 779 aa21.04■□□□□ 0.96
PSMA6-208ENST00000554843 USP47Q96K76 1375 aa21.03■□□□□ 0.96
PSMA6-208ENST00000554843 ROBO2Q9HCK4 1378 aa21.02■□□□□ 0.96
PSMA6-208ENST00000554843 SIRT1Q96EB6 747 aa21.02■□□□□ 0.96
PSMA6-208ENST00000554843 ZNF335Q9H4Z2 1342 aaPredicted RBP21.01■□□□□ 0.95
PSMA6-208ENST00000554843 STK26Q9P289 416 aa21■□□□□ 0.95
PSMA6-208ENST00000554843 LTBP4Q8N2S1 1624 aa21■□□□□ 0.95
PSMA6-208ENST00000554843 TRAK1Q9UPV9 953 aa20.99■□□□□ 0.95
PSMA6-208ENST00000554843 QRICH2Q9H0J4 1663 aa20.97■□□□□ 0.95
PSMA6-208ENST00000554843 SBNO2Q9Y2G9 1366 aa20.97■□□□□ 0.95
PSMA6-208ENST00000554843 NCOA3Q9Y6Q9 1424 aa20.95■□□□□ 0.95
PSMA6-208ENST00000554843 LRRC7Q96NW7 1537 aa20.95■□□□□ 0.94
PSMA6-208ENST00000554843 ADGRB2O60241 1585 aa20.95■□□□□ 0.94
PSMA6-208ENST00000554843 CENPJQ9HC77 1338 aaPredicted RBP20.95■□□□□ 0.94
PSMA6-208ENST00000554843 PLEKHH1Q9ULM0 1364 aa20.95■□□□□ 0.94
PSMA6-208ENST00000554843 EIF4G2P78344 907 aaKnown RBP eCLIP20.94■□□□□ 0.94
PSMA6-208ENST00000554843 PRAM1Q96QH2 718 aa20.94■□□□□ 0.94
PSMA6-208ENST00000554843 NALCNQ8IZF0 1738 aa20.92■□□□□ 0.94
PSMA6-208ENST00000554843 ADGRL3Q9HAR2 1447 aa20.92■□□□□ 0.94
PSMA6-208ENST00000554843 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.92■□□□□ 0.94
PSMA6-208ENST00000554843 TMEM94Q12767 1356 aa20.91■□□□□ 0.94
PSMA6-208ENST00000554843 XIRP1Q702N8 1843 aaKnown RBP20.91■□□□□ 0.94
PSMA6-208ENST00000554843 POGKQ9P215 609 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms