RNA–Protein interactions for RNA: ENST00000554722.1

GABRB3-207, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 3

Gene GABRB3, Length 406 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-207ENST00000554722 KCNA6P17658 529 aa23.92■■□□□ 1.42
GABRB3-207ENST00000554722 SENP3Q9H4L4 574 aaPredicted RBP23.92■■□□□ 1.42
GABRB3-207ENST00000554722 TMEM131LA2VDJ0 1609 aa23.92■■□□□ 1.42
GABRB3-207ENST00000554722 SLC26A8Q96RN1 970 aa23.91■■□□□ 1.42
GABRB3-207ENST00000554722 XIRP1Q702N8 1843 aaKnown RBP23.89■■□□□ 1.42
GABRB3-207ENST00000554722 BCANQ96GW7 911 aa23.89■■□□□ 1.41
GABRB3-207ENST00000554722 PHF23Q9BUL5 403 aaPredicted RBP23.89■■□□□ 1.41
GABRB3-207ENST00000554722 NAIPQ13075 1403 aa23.89■■□□□ 1.41
GABRB3-207ENST00000554722 TMEM94Q12767 1356 aa23.88■■□□□ 1.41
GABRB3-207ENST00000554722 HDGFP51858 240 aaKnown RBP23.86■■□□□ 1.41
GABRB3-207ENST00000554722 PROSER2Q86WR7 435 aaPredicted RBP23.86■■□□□ 1.41
GABRB3-207ENST00000554722 SPHKAPQ2M3C7 1700 aa23.85■■□□□ 1.41
GABRB3-207ENST00000554722 PPP1R15AO75807 674 aaPredicted RBP23.84■■□□□ 1.41
GABRB3-207ENST00000554722 ZFYVE9O95405 1425 aa23.84■■□□□ 1.41
GABRB3-207ENST00000554722 FAM135BQ49AJ0 1406 aa23.82■■□□□ 1.4
GABRB3-207ENST00000554722 NKTRP30414 1462 aaKnown RBP23.81■■□□□ 1.4
GABRB3-207ENST00000554722 PLEKHG1Q9ULL1 1385 aa23.81■■□□□ 1.4
GABRB3-207ENST00000554722 RIMS2Q9UQ26 1411 aa23.81■■□□□ 1.4
GABRB3-207ENST00000554722 CHGAP10645 457 aaKnown RBP23.8■■□□□ 1.4
GABRB3-207ENST00000554722 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.79■■□□□ 1.4
GABRB3-207ENST00000554722 NWD1Q149M9 1564 aa23.78■■□□□ 1.4
GABRB3-207ENST00000554722 RBM33Q96EV2 1170 aaKnown RBP23.78■■□□□ 1.4
GABRB3-207ENST00000554722 HFM1A2PYH4 1435 aa23.77■■□□□ 1.4
GABRB3-207ENST00000554722 NUTM2DQ5VT03 806 aaPredicted RBP23.76■■□□□ 1.39
GABRB3-207ENST00000554722 MSH6P52701 1360 aa23.76■■□□□ 1.39
GABRB3-207ENST00000554722 CHD2O14647 1828 aaKnown RBP23.75■■□□□ 1.39
GABRB3-207ENST00000554722 TBX22Q9Y458 520 aa23.74■■□□□ 1.39
GABRB3-207ENST00000554722 CLTCL1P53675 1640 aa23.73■■□□□ 1.39
GABRB3-207ENST00000554722 KIF1BO60333 1816 aa23.69■■□□□ 1.38
GABRB3-207ENST00000554722 TRIM52Q96A61 297 aa23.69■■□□□ 1.38
GABRB3-207ENST00000554722 ROBO1Q9Y6N7 1651 aa23.68■■□□□ 1.38
GABRB3-207ENST00000554722 SLAIN2Q9P270 581 aa23.68■■□□□ 1.38
GABRB3-207ENST00000554722 TRPM2O94759 1503 aa23.68■■□□□ 1.38
GABRB3-207ENST00000554722 ADAMTS13Q76LX8 1427 aa23.67■■□□□ 1.38
GABRB3-207ENST00000554722 NCOA3Q9Y6Q9 1424 aa23.66■■□□□ 1.38
GABRB3-207ENST00000554722 PIK3R4Q99570 1358 aa23.65■■□□□ 1.38
GABRB3-207ENST00000554722 NRXN3Q9Y4C0 1643 aa23.65■■□□□ 1.38
GABRB3-207ENST00000554722 DIP2AQ14689 1571 aa23.65■■□□□ 1.38
GABRB3-207ENST00000554722 C14orf37Q86TY3 774 aa23.64■■□□□ 1.37
GABRB3-207ENST00000554722 RGS17Q9UGC6 210 aaPredicted RBP23.62■■□□□ 1.37
GABRB3-207ENST00000554722 NEXMIFQ5QGS0 1516 aa23.6■■□□□ 1.37
GABRB3-207ENST00000554722 SLC4A1APQ9BWU0 796 aaKnown RBP23.6■■□□□ 1.37
GABRB3-207ENST00000554722 FOXD1Q16676 465 aa23.59■■□□□ 1.37
GABRB3-207ENST00000554722 ZNF326Q5BKZ1 582 aaKnown RBP23.59■■□□□ 1.37
GABRB3-207ENST00000554722 CADPS2Q86UW7 1296 aa23.59■■□□□ 1.37
GABRB3-207ENST00000554722 C19orf44Q9H6X5 657 aa23.58■■□□□ 1.37
GABRB3-207ENST00000554722 ATF3P18847 181 aa23.57■■□□□ 1.36
GABRB3-207ENST00000554722 AMOTL2Q9Y2J4 779 aa23.57■■□□□ 1.36
GABRB3-207ENST00000554722 PTPRUQ92729 1446 aa23.57■■□□□ 1.36
GABRB3-207ENST00000554722 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
GABRB3-207ENST00000554722 JCADQ9P266 1359 aa23.56■■□□□ 1.36
GABRB3-207ENST00000554722 PHLPP1O60346 1717 aa23.54■■□□□ 1.36
GABRB3-207ENST00000554722 PPLO60437 1756 aa23.52■■□□□ 1.36
GABRB3-207ENST00000554722 XRN1Q8IZH2 1706 aaKnown RBP23.5■■□□□ 1.35
GABRB3-207ENST00000554722 POTEAQ6S8J7 498 aa23.5■■□□□ 1.35
GABRB3-207ENST00000554722 MPHOSPH9Q99550 1183 aa23.5■■□□□ 1.35
GABRB3-207ENST00000554722 SETD1AO15047 1707 aaKnown RBP23.5■■□□□ 1.35
GABRB3-207ENST00000554722 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.5■■□□□ 1.35
GABRB3-207ENST00000554722 METP08581 1390 aa23.49■■□□□ 1.35
GABRB3-207ENST00000554722 SETD5Q9C0A6 1442 aa23.48■■□□□ 1.35
GABRB3-207ENST00000554722 COL16A1Q07092 1604 aaPredicted RBP23.47■■□□□ 1.35
GABRB3-207ENST00000554722 DCCP43146 1447 aa23.46■■□□□ 1.35
GABRB3-207ENST00000554722 SPATA31A6Q5VVP1 1343 aa23.45■■□□□ 1.34
GABRB3-207ENST00000554722 AHDC1Q5TGY3 1603 aaPredicted RBP23.44■■□□□ 1.34
GABRB3-207ENST00000554722 IFT172Q9UG01 1749 aa23.43■■□□□ 1.34
GABRB3-207ENST00000554722 BRINP3Q76B58 766 aa23.43■■□□□ 1.34
GABRB3-207ENST00000554722 RAB3GAP2Q9H2M9 1393 aa23.42■■□□□ 1.34
GABRB3-207ENST00000554722 MEX3CQ5U5Q3 659 aaKnown RBP23.4■■□□□ 1.34
GABRB3-207ENST00000554722 CCDC144AA2RUR9 1427 aa23.39■■□□□ 1.33
GABRB3-207ENST00000554722 RPGRIP1LQ68CZ1 1315 aa23.38■■□□□ 1.33
GABRB3-207ENST00000554722 VGFO15240 615 aaPredicted RBP23.38■■□□□ 1.33
GABRB3-207ENST00000554722 SPATA31E1Q6ZUB1 1445 aa23.38■■□□□ 1.33
GABRB3-207ENST00000554722 NALCNQ8IZF0 1738 aa23.36■■□□□ 1.33
GABRB3-207ENST00000554722 MST1RQ04912 1400 aa23.36■■□□□ 1.33
GABRB3-207ENST00000554722 ADGRL3Q9HAR2 1447 aa23.36■■□□□ 1.33
GABRB3-207ENST00000554722 RGL3Q3MIN7 710 aa23.36■■□□□ 1.33
GABRB3-207ENST00000554722 LRP6O75581 1613 aa23.36■■□□□ 1.33
GABRB3-207ENST00000554722 ASXL1Q8IXJ9 1541 aa23.35■■□□□ 1.33
GABRB3-207ENST00000554722 SHPRHQ149N8 1683 aa23.35■■□□□ 1.33
GABRB3-207ENST00000554722 ADGRF5Q8IZF2 1346 aa23.34■■□□□ 1.33
GABRB3-207ENST00000554722 ZNF772Q68DY9 489 aaPredicted RBP23.34■■□□□ 1.33
GABRB3-207ENST00000554722 LRRC59Q96AG4 307 aaKnown RBP23.3■■□□□ 1.32
GABRB3-207ENST00000554722 NUTM2BA6NNL0 878 aaPredicted RBP23.29■■□□□ 1.32
GABRB3-207ENST00000554722 NUTM2EB1AL46 878 aaPredicted RBP23.29■■□□□ 1.32
GABRB3-207ENST00000554722 PTCH1Q13635 1447 aa23.29■■□□□ 1.32
GABRB3-207ENST00000554722 NUTM2AQ8IVF1 878 aaPredicted RBP23.29■■□□□ 1.32
GABRB3-207ENST00000554722 ACIN1Q9UKV3 1341 aaKnown RBP23.28■■□□□ 1.32
GABRB3-207ENST00000554722 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.32
GABRB3-207ENST00000554722 NHSL1Q5SYE7 1610 aa23.26■■□□□ 1.31
GABRB3-207ENST00000554722 C1orf167Q5SNV9 1468 aa23.24■■□□□ 1.31
GABRB3-207ENST00000554722 ANKRD30BQ9BXX2 1392 aa23.24■■□□□ 1.31
GABRB3-207ENST00000554722 PRAG1Q86YV5 1406 aa23.24■■□□□ 1.31
GABRB3-207ENST00000554722 DDX17Q92841 729 aaKnown RBP23.23■■□□□ 1.31
GABRB3-207ENST00000554722 PIK3C2GO75747 1445 aa23.22■■□□□ 1.31
GABRB3-207ENST00000554722 RXRBP28702 533 aa23.21■■□□□ 1.31
GABRB3-207ENST00000554722 PNPLA6Q8IY17 1366 aa23.2■■□□□ 1.3
GABRB3-207ENST00000554722 AFF2P51816 1311 aa23.2■■□□□ 1.3
GABRB3-207ENST00000554722 TMEM132EQ6IEE7 984 aa23.2■■□□□ 1.3
GABRB3-207ENST00000554722 KNDC1Q76NI1 1749 aa23.19■■□□□ 1.3
GABRB3-207ENST00000554722 HRCP23327 699 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms