RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 SPATA31E1Q6ZUB1 1445 aa31.4■■■□□ 2.62
SDR39U1-208ENST00000554698 KIF1BO60333 1816 aa31.4■■■□□ 2.62
SDR39U1-208ENST00000554698 POLR1AO95602 1720 aaPredicted RBP31.39■■■□□ 2.62
SDR39U1-208ENST00000554698 HDGFP51858 240 aaKnown RBP31.36■■■□□ 2.61
SDR39U1-208ENST00000554698 ZNF326Q5BKZ1 582 aaKnown RBP31.36■■■□□ 2.61
SDR39U1-208ENST00000554698 NPHP4O75161 1426 aaPredicted RBP31.35■■■□□ 2.61
SDR39U1-208ENST00000554698 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.35■■■□□ 2.61
SDR39U1-208ENST00000554698 NEXMIFQ5QGS0 1516 aa31.32■■■□□ 2.6
SDR39U1-208ENST00000554698 RPGRIP1LQ68CZ1 1315 aa31.32■■■□□ 2.6
SDR39U1-208ENST00000554698 PPP1R15AO75807 674 aaPredicted RBP31.29■■■□□ 2.6
SDR39U1-208ENST00000554698 PLEKHG1Q9ULL1 1385 aa31.28■■■□□ 2.6
SDR39U1-208ENST00000554698 RGL3Q3MIN7 710 aa31.28■■■□□ 2.6
SDR39U1-208ENST00000554698 IQGAP1P46940 1657 aa31.28■■■□□ 2.6
SDR39U1-208ENST00000554698 NUTM2DQ5VT03 806 aaPredicted RBP31.27■■■□□ 2.6
SDR39U1-208ENST00000554698 VGFO15240 615 aaPredicted RBP31.21■■■□□ 2.59
SDR39U1-208ENST00000554698 PPLO60437 1756 aa31.19■■■□□ 2.58
SDR39U1-208ENST00000554698 SIN3AQ96ST3 1273 aa31.18■■■□□ 2.58
SDR39U1-208ENST00000554698 SETBP1Q9Y6X0 1596 aa31.16■■■□□ 2.58
SDR39U1-208ENST00000554698 IFT172Q9UG01 1749 aa31.16■■■□□ 2.58
SDR39U1-208ENST00000554698 ADAMTS13Q76LX8 1427 aa31.15■■■□□ 2.58
SDR39U1-208ENST00000554698 BCANQ96GW7 911 aa31.15■■■□□ 2.58
SDR39U1-208ENST00000554698 SLC26A8Q96RN1 970 aa31.15■■■□□ 2.58
SDR39U1-208ENST00000554698 SENP3Q9H4L4 574 aaPredicted RBP31.14■■■□□ 2.58
SDR39U1-208ENST00000554698 MYOM2P54296 1465 aa31.12■■■□□ 2.57
SDR39U1-208ENST00000554698 ADGRF5Q8IZF2 1346 aa31.12■■■□□ 2.57
SDR39U1-208ENST00000554698 TBX22Q9Y458 520 aa31.12■■■□□ 2.57
SDR39U1-208ENST00000554698 NRXN3Q9Y4C0 1643 aa31.12■■■□□ 2.57
SDR39U1-208ENST00000554698 ZNF335Q9H4Z2 1342 aaPredicted RBP31.1■■■□□ 2.57
SDR39U1-208ENST00000554698 NEUROD1Q13562 356 aa31.1■■■□□ 2.57
SDR39U1-208ENST00000554698 DIP2AQ14689 1571 aa31.1■■■□□ 2.57
SDR39U1-208ENST00000554698 NRXN1Q9ULB1 1477 aa31.09■■■□□ 2.57
SDR39U1-208ENST00000554698 CLSPNQ9HAW4 1339 aa31.09■■■□□ 2.57
SDR39U1-208ENST00000554698 STAC3Q96MF2 364 aa31.08■■■□□ 2.57
SDR39U1-208ENST00000554698 DCAF11Q8TEB1 546 aa31.07■■■□□ 2.56
SDR39U1-208ENST00000554698 PIK3C2GO75747 1445 aa31.06■■■□□ 2.56
SDR39U1-208ENST00000554698 LTBP4Q8N2S1 1624 aa31.04■■■□□ 2.56
SDR39U1-208ENST00000554698 PIK3R4Q99570 1358 aa31.02■■■□□ 2.56
SDR39U1-208ENST00000554698 ALKQ9UM73 1620 aa31.01■■■□□ 2.55
SDR39U1-208ENST00000554698 CCER1Q8TC90 406 aaPredicted RBP31.01■■■□□ 2.55
SDR39U1-208ENST00000554698 L3MBTL2Q969R5 705 aa31.01■■■□□ 2.55
SDR39U1-208ENST00000554698 KDM2AQ9Y2K7 1162 aa31.01■■■□□ 2.55
SDR39U1-208ENST00000554698 KCNA6P17658 529 aa30.99■■■□□ 2.55
SDR39U1-208ENST00000554698 METP08581 1390 aa30.99■■■□□ 2.55
SDR39U1-208ENST00000554698 CPS1P31327 1500 aa30.96■■■□□ 2.55
SDR39U1-208ENST00000554698 SETD1AO15047 1707 aaKnown RBP30.96■■■□□ 2.55
SDR39U1-208ENST00000554698 NWD1Q149M9 1564 aa30.96■■■□□ 2.55
SDR39U1-208ENST00000554698 C14orf93Q9H972 538 aaKnown RBP30.94■■■□□ 2.54
SDR39U1-208ENST00000554698 STRCP1A6NGW2 1772 aa30.94■■■□□ 2.54
SDR39U1-208ENST00000554698 PTPRUQ92729 1446 aa30.94■■■□□ 2.54
SDR39U1-208ENST00000554698 TONSLQ96HA7 1378 aa30.93■■■□□ 2.54
SDR39U1-208ENST00000554698 PRAG1Q86YV5 1406 aa30.91■■■□□ 2.54
SDR39U1-208ENST00000554698 CHD2O14647 1828 aaKnown RBP30.9■■■□□ 2.54
SDR39U1-208ENST00000554698 NKTRP30414 1462 aaKnown RBP30.9■■■□□ 2.54
SDR39U1-208ENST00000554698 CFAP70Q5T0N1 1121 aa30.9■■■□□ 2.54
SDR39U1-208ENST00000554698 LAMC1P11047 1609 aa30.89■■■□□ 2.54
SDR39U1-208ENST00000554698 AMOTL2Q9Y2J4 779 aa30.89■■■□□ 2.54
SDR39U1-208ENST00000554698 ASXL1Q8IXJ9 1541 aa30.87■■■□□ 2.53
SDR39U1-208ENST00000554698 CERKQ8TCT0 537 aa30.87■■■□□ 2.53
SDR39U1-208ENST00000554698 LRRC7Q96NW7 1537 aa30.86■■■□□ 2.53
SDR39U1-208ENST00000554698 XRN1Q8IZH2 1706 aaKnown RBP30.86■■■□□ 2.53
SDR39U1-208ENST00000554698 TMEM132EQ6IEE7 984 aa30.82■■■□□ 2.52
SDR39U1-208ENST00000554698 TIMELESSQ9UNS1 1208 aa30.82■■■□□ 2.52
SDR39U1-208ENST00000554698 ADGRB1O14514 1584 aa30.81■■■□□ 2.52
SDR39U1-208ENST00000554698 IQSEC2Q5JU85 1478 aa30.81■■■□□ 2.52
SDR39U1-208ENST00000554698 LRPPRCP42704 1394 aaKnown RBP30.81■■■□□ 2.52
SDR39U1-208ENST00000554698 PROSER2Q86WR7 435 aaPredicted RBP30.8■■■□□ 2.52
SDR39U1-208ENST00000554698 TMEM94Q12767 1356 aa30.78■■■□□ 2.52
SDR39U1-208ENST00000554698 TECPR2O15040 1411 aa30.78■■■□□ 2.52
SDR39U1-208ENST00000554698 PTCH1Q13635 1447 aa30.78■■■□□ 2.52
SDR39U1-208ENST00000554698 YTHDC2Q9H6S0 1430 aaKnown RBP30.78■■■□□ 2.52
SDR39U1-208ENST00000554698 ABCC11Q96J66 1382 aa30.77■■■□□ 2.52
SDR39U1-208ENST00000554698 KIAA1210Q9ULL0 1709 aa30.77■■■□□ 2.52
SDR39U1-208ENST00000554698 ROBO2Q9HCK4 1378 aa30.75■■■□□ 2.51
SDR39U1-208ENST00000554698 NBPF8Q3BBV2 869 aa30.74■■■□□ 2.51
SDR39U1-208ENST00000554698 NCOA3Q9Y6Q9 1424 aa30.74■■■□□ 2.51
SDR39U1-208ENST00000554698 RBM33Q96EV2 1170 aaKnown RBP30.73■■■□□ 2.51
SDR39U1-208ENST00000554698 STK26Q9P289 416 aa30.73■■■□□ 2.51
SDR39U1-208ENST00000554698 NBPF1Q3BBV0 1214 aa30.71■■■□□ 2.51
SDR39U1-208ENST00000554698 KNDC1Q76NI1 1749 aa30.69■■■□□ 2.5
SDR39U1-208ENST00000554698 XIRP1Q702N8 1843 aaKnown RBP30.69■■■□□ 2.5
SDR39U1-208ENST00000554698 SIRT1Q96EB6 747 aa30.68■■■□□ 2.5
SDR39U1-208ENST00000554698 TRPM1Q7Z4N2 1603 aa30.68■■■□□ 2.5
SDR39U1-208ENST00000554698 FAM135BQ49AJ0 1406 aa30.66■■■□□ 2.5
SDR39U1-208ENST00000554698 DLC1Q96QB1 1528 aa30.66■■■□□ 2.5
SDR39U1-208ENST00000554698 RALGAPBQ86X10 1494 aa30.63■■■□□ 2.49
SDR39U1-208ENST00000554698 ROCK2O75116 1388 aaKnown RBP30.62■■■□□ 2.49
SDR39U1-208ENST00000554698 GPRASP1Q5JY77 1395 aa30.62■■■□□ 2.49
SDR39U1-208ENST00000554698 TRAK1Q9UPV9 953 aa30.62■■■□□ 2.49
SDR39U1-208ENST00000554698 MSH6P52701 1360 aa30.61■■■□□ 2.49
SDR39U1-208ENST00000554698 WAPLQ7Z5K2 1190 aa30.61■■■□□ 2.49
SDR39U1-208ENST00000554698 ADGRL3Q9HAR2 1447 aa30.61■■■□□ 2.49
SDR39U1-208ENST00000554698 PLEKHH1Q9ULM0 1364 aa30.6■■■□□ 2.49
SDR39U1-208ENST00000554698 C14orf37Q86TY3 774 aa30.6■■■□□ 2.49
SDR39U1-208ENST00000554698 C19orf44Q9H6X5 657 aa30.6■■■□□ 2.49
SDR39U1-208ENST00000554698 PRAM1Q96QH2 718 aa30.57■■■□□ 2.48
SDR39U1-208ENST00000554698 DCCP43146 1447 aa30.56■■■□□ 2.48
SDR39U1-208ENST00000554698 UBAP1LF5GYI3 381 aa30.54■■■□□ 2.48
SDR39U1-208ENST00000554698 TOM1O60784 492 aa30.54■■■□□ 2.48
SDR39U1-208ENST00000554698 NALCNQ8IZF0 1738 aa30.53■■■□□ 2.48
SDR39U1-208ENST00000554698 POGKQ9P215 609 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms