RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 KCNK17Q96T54 332 aa3.77□□□□□ -1.81
PRPF39-207ENST00000554439 RSPH6AQ9H0K4 717 aa3.77□□□□□ -1.81
PRPF39-207ENST00000554439 GPHNQ9NQX3 736 aaPredicted RBP3.77□□□□□ -1.81
PRPF39-207ENST00000554439 PDIA6Q15084 440 aa3.76□□□□□ -1.81
PRPF39-207ENST00000554439 PPP1R15BQ5SWA1 713 aa3.76□□□□□ -1.81
PRPF39-207ENST00000554439 BAZ1AQ9NRL2 1556 aaPredicted RBP3.76□□□□□ -1.81
PRPF39-207ENST00000554439 DPYSL4O14531 572 aa3.76□□□□□ -1.81
PRPF39-207ENST00000554439 TNIKQ9UKE5 1360 aa3.76□□□□□ -1.81
PRPF39-207ENST00000554439 BCL2L12Q9HB09 334 aa3.75□□□□□ -1.81
PRPF39-207ENST00000554439 RANGAP1P46060 587 aaPredicted RBP3.75□□□□□ -1.81
PRPF39-207ENST00000554439 ONECUT3O60422 494 aaPredicted RBP3.74□□□□□ -1.81
PRPF39-207ENST00000554439 DSG2Q14126 1118 aa3.74□□□□□ -1.81
PRPF39-207ENST00000554439 PKDCCQ504Y2 493 aa3.74□□□□□ -1.81
PRPF39-207ENST00000554439 SUPT16HQ9Y5B9 1047 aaKnown RBP3.74□□□□□ -1.81
PRPF39-207ENST00000554439 NACADO15069 1562 aa3.74□□□□□ -1.81
PRPF39-207ENST00000554439 SOWAHBA6NEL2 793 aa3.73□□□□□ -1.81
PRPF39-207ENST00000554439 ZBED2Q9BTP6 218 aa3.73□□□□□ -1.81
PRPF39-207ENST00000554439 ARID3CA6NKF2 412 aa3.73□□□□□ -1.81
PRPF39-207ENST00000554439 AMHR2Q16671 573 aa3.73□□□□□ -1.81
PRPF39-207ENST00000554439 PARP9Q8IXQ6 854 aa3.73□□□□□ -1.81
PRPF39-207ENST00000554439 CCDC102AQ96A19 550 aa3.73□□□□□ -1.81
PRPF39-207ENST00000554439 SPDYE16A6NNV3 312 aaPredicted RBP3.72□□□□□ -1.81
PRPF39-207ENST00000554439 PTPREP23469 700 aa3.72□□□□□ -1.81
PRPF39-207ENST00000554439 KRTAP4-8Q9BYQ9 185 aa3.72□□□□□ -1.81
PRPF39-207ENST00000554439 C2orf72A6NCS6 295 aa3.72□□□□□ -1.81
PRPF39-207ENST00000554439 IRF6O14896 467 aa3.72□□□□□ -1.81
PRPF39-207ENST00000554439 PRR20EP86478 221 aa3.72□□□□□ -1.81
PRPF39-207ENST00000554439 PRR20CP86479 221 aa3.72□□□□□ -1.81
PRPF39-207ENST00000554439 PRR20DP86480 221 aa3.72□□□□□ -1.81
PRPF39-207ENST00000554439 PRR20BP86481 221 aa3.72□□□□□ -1.81
PRPF39-207ENST00000554439 PRR20AP86496 221 aa3.72□□□□□ -1.81
PRPF39-207ENST00000554439 ARID3AQ99856 593 aa3.72□□□□□ -1.81
PRPF39-207ENST00000554439 MINK1Q8N4C8 1332 aaPredicted RBP3.72□□□□□ -1.81
PRPF39-207ENST00000554439 SMARCA2P51531 1590 aa3.72□□□□□ -1.81
PRPF39-207ENST00000554439 TOP2AP11388 1531 aaKnown RBP3.72□□□□□ -1.81
PRPF39-207ENST00000554439 FECHP22830 423 aa3.72□□□□□ -1.81
PRPF39-207ENST00000554439 FOXK1P85037 733 aa3.72□□□□□ -1.81
PRPF39-207ENST00000554439 MAP2K5Q13163 448 aa3.72□□□□□ -1.81
PRPF39-207ENST00000554439 GOLGA3Q08378 1498 aa3.71□□□□□ -1.82
PRPF39-207ENST00000554439 TMC2Q8TDI7 906 aa3.71□□□□□ -1.82
PRPF39-207ENST00000554439 OSBPP22059 807 aa3.71□□□□□ -1.82
PRPF39-207ENST00000554439 GGCXP38435 758 aa3.71□□□□□ -1.82
PRPF39-207ENST00000554439 DDRGK1Q96HY6 314 aa3.71□□□□□ -1.82
PRPF39-207ENST00000554439 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.7□□□□□ -1.82
PRPF39-207ENST00000554439 APBB1O00213 710 aa3.7□□□□□ -1.82
PRPF39-207ENST00000554439 GOPCQ9HD26 462 aa3.7□□□□□ -1.82
PRPF39-207ENST00000554439 CLIP1P30622 1438 aa3.7□□□□□ -1.82
PRPF39-207ENST00000554439 PRIM1P49642 420 aaKnown RBP3.69□□□□□ -1.82
PRPF39-207ENST00000554439 NFX1Q12986 1120 aaKnown RBP3.69□□□□□ -1.82
PRPF39-207ENST00000554439 TMUB1Q9BVT8 246 aa3.69□□□□□ -1.82
PRPF39-207ENST00000554439 RABGEF1Q9UJ41 708 aa3.69□□□□□ -1.82
PRPF39-207ENST00000554439 EEA1Q15075 1411 aa3.69□□□□□ -1.82
PRPF39-207ENST00000554439 SMARCA4P51532 1647 aa3.69□□□□□ -1.82
PRPF39-207ENST00000554439 GRXCR2A6NFK2 248 aa3.69□□□□□ -1.82
PRPF39-207ENST00000554439 GNPATO15228 680 aa3.69□□□□□ -1.82
PRPF39-207ENST00000554439 MS4A1P11836 297 aa3.69□□□□□ -1.82
PRPF39-207ENST00000554439 FLIIQ13045 1269 aa3.69□□□□□ -1.82
PRPF39-207ENST00000554439 REPIN1Q9BWE0 567 aaKnown RBP3.69□□□□□ -1.82
PRPF39-207ENST00000554439 DHX57Q6P158 1386 aaKnown RBP3.68□□□□□ -1.82
PRPF39-207ENST00000554439 CLUAP1Q96AJ1 413 aa3.68□□□□□ -1.82
PRPF39-207ENST00000554439 ANP32EQ9BTT0 268 aa3.68□□□□□ -1.82
PRPF39-207ENST00000554439 TSR3Q9UJK0 312 aaKnown RBP3.68□□□□□ -1.82
PRPF39-207ENST00000554439 VPS8Q8N3P4 1428 aa3.68□□□□□ -1.82
PRPF39-207ENST00000554439 RAPGEF2Q9Y4G8 1499 aa3.68□□□□□ -1.82
PRPF39-207ENST00000554439 PLPP6Q8IY26 295 aa3.68□□□□□ -1.82
PRPF39-207ENST00000554439 CEP164Q9UPV0 1460 aa3.67□□□□□ -1.82
PRPF39-207ENST00000554439 SYNJ1O43426 1573 aa3.67□□□□□ -1.82
PRPF39-207ENST00000554439 NUTM2FA1L443 756 aa3.67□□□□□ -1.82
PRPF39-207ENST00000554439 CRIPAKQ8N1N5 446 aa3.67□□□□□ -1.82
PRPF39-207ENST00000554439 A6NJR5 290 aa3.67□□□□□ -1.82
PRPF39-207ENST00000554439 HIC1Q14526 733 aa3.67□□□□□ -1.82
PRPF39-207ENST00000554439 KANK4Q5T7N3 995 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-207ENST00000554439 BCL11AQ9H165 835 aa3.67□□□□□ -1.82
PRPF39-207ENST00000554439 TRAK2O60296 914 aa3.66□□□□□ -1.82
PRPF39-207ENST00000554439 ITGAEP38570 1179 aa3.66□□□□□ -1.82
PRPF39-207ENST00000554439 PTGDRQ13258 359 aa3.66□□□□□ -1.82
PRPF39-207ENST00000554439 CCDC82Q8N4S0 544 aa3.66□□□□□ -1.82
PRPF39-207ENST00000554439 OXER1Q8TDS5 423 aa3.66□□□□□ -1.82
PRPF39-207ENST00000554439 NECTIN2Q92692 538 aa3.66□□□□□ -1.82
PRPF39-207ENST00000554439 IL21Q9HBE4 155 aa3.66□□□□□ -1.82
PRPF39-207ENST00000554439 KIF21BO75037 1637 aa3.66□□□□□ -1.82
PRPF39-207ENST00000554439 KCNMA1Q12791 1236 aa3.66□□□□□ -1.82
PRPF39-207ENST00000554439 GIGYF2Q6Y7W6 1299 aaKnown RBP3.66□□□□□ -1.82
PRPF39-207ENST00000554439 FCHSD2O94868 740 aa3.66□□□□□ -1.82
PRPF39-207ENST00000554439 MCM6Q14566 821 aa3.66□□□□□ -1.82
PRPF39-207ENST00000554439 CLSPNQ9HAW4 1339 aa3.65□□□□□ -1.83
PRPF39-207ENST00000554439 POTECB2RU33 542 aa3.65□□□□□ -1.83
PRPF39-207ENST00000554439 IGHA1P01876 353 aa3.65□□□□□ -1.83
PRPF39-207ENST00000554439 MAP3K9P80192 1104 aa3.65□□□□□ -1.83
PRPF39-207ENST00000554439 TTLL12Q14166 644 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-207ENST00000554439 DDX12PQ92771 950 aa3.65□□□□□ -1.83
PRPF39-207ENST00000554439 PHOX2BQ99453 314 aa3.65□□□□□ -1.83
PRPF39-207ENST00000554439 PPP1R18Q6NYC8 613 aa3.64□□□□□ -1.83
PRPF39-207ENST00000554439 NPM2Q86SE8 214 aaKnown RBP3.64□□□□□ -1.83
PRPF39-207ENST00000554439 FNBP4Q8N3X1 1017 aaPredicted RBP3.64□□□□□ -1.83
PRPF39-207ENST00000554439 ZSCAN1Q8NBB4 408 aa3.64□□□□□ -1.83
PRPF39-207ENST00000554439 UNC13AQ9UPW8 1703 aa3.64□□□□□ -1.83
PRPF39-207ENST00000554439 HIRIP3Q9BW71 556 aaPredicted RBP3.64□□□□□ -1.83
PRPF39-207ENST00000554439 DDX10Q13206 875 aaKnown RBP3.63□□□□□ -1.83
PRPF39-207ENST00000554439 XP32Q5T750 250 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms