RNA–Protein interactions for RNA: ENST00000554359.1

ITGA7-209, Transcript of integrin subunit alpha 7, humanhuman

TSL 4

Gene ITGA7, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-209ENST00000554359 NUP155O75694 1391 aa27.79■■■□□ 2.04
ITGA7-209ENST00000554359 RRBP1Q9P2E9 1410 aaKnown RBP27.76■■■□□ 2.04
ITGA7-209ENST00000554359 RIMS2Q9UQ26 1411 aa27.76■■■□□ 2.04
ITGA7-209ENST00000554359 KCNA6P17658 529 aa27.75■■■□□ 2.03
ITGA7-209ENST00000554359 SENP3Q9H4L4 574 aaPredicted RBP27.75■■■□□ 2.03
ITGA7-209ENST00000554359 NWD1Q149M9 1564 aa27.74■■■□□ 2.03
ITGA7-209ENST00000554359 TMEM94Q12767 1356 aa27.73■■■□□ 2.03
ITGA7-209ENST00000554359 PLEKHG1Q9ULL1 1385 aa27.73■■■□□ 2.03
ITGA7-209ENST00000554359 MED1Q15648 1581 aaPredicted RBP27.72■■■□□ 2.03
ITGA7-209ENST00000554359 CHGAP10645 457 aaKnown RBP27.69■■■□□ 2.02
ITGA7-209ENST00000554359 RBM33Q96EV2 1170 aaKnown RBP27.69■■■□□ 2.02
ITGA7-209ENST00000554359 BCANQ96GW7 911 aa27.68■■■□□ 2.02
ITGA7-209ENST00000554359 NKTRP30414 1462 aaKnown RBP27.68■■■□□ 2.02
ITGA7-209ENST00000554359 PPP1R15AO75807 674 aaPredicted RBP27.66■■■□□ 2.02
ITGA7-209ENST00000554359 NUTM2DQ5VT03 806 aaPredicted RBP27.65■■■□□ 2.02
ITGA7-209ENST00000554359 PROSER2Q86WR7 435 aaPredicted RBP27.65■■■□□ 2.02
ITGA7-209ENST00000554359 NAIPQ13075 1403 aa27.65■■■□□ 2.02
ITGA7-209ENST00000554359 CHD2O14647 1828 aaKnown RBP27.63■■■□□ 2.01
ITGA7-209ENST00000554359 SOCS7O14512 581 aa27.63■■■□□ 2.01
ITGA7-209ENST00000554359 ADAMTS13Q76LX8 1427 aa27.63■■■□□ 2.01
ITGA7-209ENST00000554359 SPHKAPQ2M3C7 1700 aa27.62■■■□□ 2.01
ITGA7-209ENST00000554359 HDGFP51858 240 aaKnown RBP27.61■■■□□ 2.01
ITGA7-209ENST00000554359 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.61■■■□□ 2.01
ITGA7-209ENST00000554359 TBX22Q9Y458 520 aa27.59■■■□□ 2.01
ITGA7-209ENST00000554359 FAM135BQ49AJ0 1406 aa27.58■■■□□ 2.01
ITGA7-209ENST00000554359 DIP2AQ14689 1571 aa27.56■■■□□ 2
ITGA7-209ENST00000554359 ROBO1Q9Y6N7 1651 aa27.53■■■□□ 2
ITGA7-209ENST00000554359 CLTCL1P53675 1640 aa27.52■■■□□ 2
ITGA7-209ENST00000554359 HFM1A2PYH4 1435 aa27.52■■■□□ 2
ITGA7-209ENST00000554359 MSH6P52701 1360 aa27.52■■■□□ 2
ITGA7-209ENST00000554359 NRXN3Q9Y4C0 1643 aa27.52■■■□□ 2
ITGA7-209ENST00000554359 TRPM2O94759 1503 aa27.51■■□□□ 1.99
ITGA7-209ENST00000554359 PTPRUQ92729 1446 aa27.5■■□□□ 1.99
ITGA7-209ENST00000554359 PIK3R4Q99570 1358 aa27.49■■□□□ 1.99
ITGA7-209ENST00000554359 SETBP1Q9Y6X0 1596 aa27.47■■□□□ 1.99
ITGA7-209ENST00000554359 NCOA3Q9Y6Q9 1424 aa27.44■■□□□ 1.98
ITGA7-209ENST00000554359 ZNF326Q5BKZ1 582 aaKnown RBP27.44■■□□□ 1.98
ITGA7-209ENST00000554359 SLAIN2Q9P270 581 aa27.44■■□□□ 1.98
ITGA7-209ENST00000554359 NEXMIFQ5QGS0 1516 aa27.44■■□□□ 1.98
ITGA7-209ENST00000554359 PHF23Q9BUL5 403 aaPredicted RBP27.42■■□□□ 1.98
ITGA7-209ENST00000554359 TRIM52Q96A61 297 aa27.41■■□□□ 1.98
ITGA7-209ENST00000554359 AMOTL2Q9Y2J4 779 aa27.41■■□□□ 1.98
ITGA7-209ENST00000554359 XRN1Q8IZH2 1706 aaKnown RBP27.41■■□□□ 1.98
ITGA7-209ENST00000554359 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.39■■□□□ 1.98
ITGA7-209ENST00000554359 METP08581 1390 aa27.38■■□□□ 1.97
ITGA7-209ENST00000554359 KIF1BO60333 1816 aa27.37■■□□□ 1.97
ITGA7-209ENST00000554359 C14orf37Q86TY3 774 aa27.37■■□□□ 1.97
ITGA7-209ENST00000554359 RGS17Q9UGC6 210 aaPredicted RBP27.36■■□□□ 1.97
ITGA7-209ENST00000554359 SLC4A1APQ9BWU0 796 aaKnown RBP27.35■■□□□ 1.97
ITGA7-209ENST00000554359 PHLPP1O60346 1717 aa27.35■■□□□ 1.97
ITGA7-209ENST00000554359 C19orf44Q9H6X5 657 aa27.34■■□□□ 1.97
ITGA7-209ENST00000554359 COL16A1Q07092 1604 aaPredicted RBP27.31■■□□□ 1.96
ITGA7-209ENST00000554359 CADPS2Q86UW7 1296 aa27.31■■□□□ 1.96
ITGA7-209ENST00000554359 FOXD1Q16676 465 aa27.3■■□□□ 1.96
ITGA7-209ENST00000554359 ATF3P18847 181 aa27.29■■□□□ 1.96
ITGA7-209ENST00000554359 SETD1AO15047 1707 aaKnown RBP27.27■■□□□ 1.96
ITGA7-209ENST00000554359 AHDC1Q5TGY3 1603 aaPredicted RBP27.26■■□□□ 1.95
ITGA7-209ENST00000554359 DCCP43146 1447 aa27.25■■□□□ 1.95
ITGA7-209ENST00000554359 JCADQ9P266 1359 aa27.24■■□□□ 1.95
ITGA7-209ENST00000554359 PPLO60437 1756 aa27.22■■□□□ 1.95
ITGA7-209ENST00000554359 BRINP3Q76B58 766 aa27.22■■□□□ 1.95
ITGA7-209ENST00000554359 MST1RQ04912 1400 aa27.22■■□□□ 1.95
ITGA7-209ENST00000554359 NALCNQ8IZF0 1738 aa27.21■■□□□ 1.95
ITGA7-209ENST00000554359 RPGRIP1LQ68CZ1 1315 aa27.2■■□□□ 1.95
ITGA7-209ENST00000554359 VGFO15240 615 aaPredicted RBP27.2■■□□□ 1.94
ITGA7-209ENST00000554359 ADGRL3Q9HAR2 1447 aa27.2■■□□□ 1.94
ITGA7-209ENST00000554359 ASXL1Q8IXJ9 1541 aa27.18■■□□□ 1.94
ITGA7-209ENST00000554359 MPHOSPH9Q99550 1183 aa27.18■■□□□ 1.94
ITGA7-209ENST00000554359 LRP6O75581 1613 aa27.17■■□□□ 1.94
ITGA7-209ENST00000554359 POTEAQ6S8J7 498 aa27.17■■□□□ 1.94
ITGA7-209ENST00000554359 ROBO2Q9HCK4 1378 aa27.17■■□□□ 1.94
ITGA7-209ENST00000554359 PTCH1Q13635 1447 aa27.16■■□□□ 1.94
ITGA7-209ENST00000554359 SPATA31E1Q6ZUB1 1445 aa27.16■■□□□ 1.94
ITGA7-209ENST00000554359 CCDC144AA2RUR9 1427 aa27.15■■□□□ 1.94
ITGA7-209ENST00000554359 PRAG1Q86YV5 1406 aa27.15■■□□□ 1.94
ITGA7-209ENST00000554359 SHPRHQ149N8 1683 aa27.13■■□□□ 1.93
ITGA7-209ENST00000554359 ADGRF5Q8IZF2 1346 aa27.12■■□□□ 1.93
ITGA7-209ENST00000554359 NHSL1Q5SYE7 1610 aa27.12■■□□□ 1.93
ITGA7-209ENST00000554359 SPATA31A6Q5VVP1 1343 aa27.1■■□□□ 1.93
ITGA7-209ENST00000554359 IFT172Q9UG01 1749 aa27.1■■□□□ 1.93
ITGA7-209ENST00000554359 SETD5Q9C0A6 1442 aa27.08■■□□□ 1.93
ITGA7-209ENST00000554359 RGL3Q3MIN7 710 aa27.08■■□□□ 1.93
ITGA7-209ENST00000554359 DDX17Q92841 729 aaKnown RBP27.07■■□□□ 1.92
ITGA7-209ENST00000554359 C1orf167Q5SNV9 1468 aa27.06■■□□□ 1.92
ITGA7-209ENST00000554359 ANKRD30BQ9BXX2 1392 aa27.02■■□□□ 1.92
ITGA7-209ENST00000554359 RAB3GAP2Q9H2M9 1393 aa27.01■■□□□ 1.91
ITGA7-209ENST00000554359 PIK3C2GO75747 1445 aa26.99■■□□□ 1.91
ITGA7-209ENST00000554359 LAMC1P11047 1609 aa26.98■■□□□ 1.91
ITGA7-209ENST00000554359 MEX3CQ5U5Q3 659 aaKnown RBP26.98■■□□□ 1.91
ITGA7-209ENST00000554359 ORAI2Q96SN7 254 aa26.98■■□□□ 1.91
ITGA7-209ENST00000554359 TECPR2O15040 1411 aa26.98■■□□□ 1.91
ITGA7-209ENST00000554359 NUTM2BA6NNL0 878 aaPredicted RBP26.97■■□□□ 1.91
ITGA7-209ENST00000554359 NUTM2EB1AL46 878 aaPredicted RBP26.97■■□□□ 1.91
ITGA7-209ENST00000554359 NUTM2AQ8IVF1 878 aaPredicted RBP26.97■■□□□ 1.91
ITGA7-209ENST00000554359 LRPPRCP42704 1394 aaKnown RBP26.96■■□□□ 1.91
ITGA7-209ENST00000554359 PNPLA6Q8IY17 1366 aa26.96■■□□□ 1.91
ITGA7-209ENST00000554359 TMEM132EQ6IEE7 984 aa26.95■■□□□ 1.9
ITGA7-209ENST00000554359 LRRC59Q96AG4 307 aaKnown RBP26.95■■□□□ 1.9
ITGA7-209ENST00000554359 STK26Q9P289 416 aa26.95■■□□□ 1.9
ITGA7-209ENST00000554359 CDC42BPGQ6DT37 1551 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms