RNA–Protein interactions for RNA: ENST00000554340.1

NEMP1-204, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 1 (best)

Gene NEMP1, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-204ENST00000554340 SLC26A8Q96RN1 970 aa31.46■■■□□ 2.63
NEMP1-204ENST00000554340 ZFYVE9O95405 1425 aa31.46■■■□□ 2.63
NEMP1-204ENST00000554340 NKTRP30414 1462 aaKnown RBP31.44■■■□□ 2.62
NEMP1-204ENST00000554340 TMEM94Q12767 1356 aa31.44■■■□□ 2.62
NEMP1-204ENST00000554340 RIMS2Q9UQ26 1411 aa31.41■■■□□ 2.62
NEMP1-204ENST00000554340 SENP3Q9H4L4 574 aaPredicted RBP31.41■■■□□ 2.62
NEMP1-204ENST00000554340 PLEKHG1Q9ULL1 1385 aa31.4■■■□□ 2.62
NEMP1-204ENST00000554340 CHD2O14647 1828 aaKnown RBP31.39■■■□□ 2.62
NEMP1-204ENST00000554340 BCANQ96GW7 911 aa31.38■■■□□ 2.61
NEMP1-204ENST00000554340 PROSER2Q86WR7 435 aaPredicted RBP31.36■■■□□ 2.61
NEMP1-204ENST00000554340 FAM135BQ49AJ0 1406 aa31.35■■■□□ 2.61
NEMP1-204ENST00000554340 HDGFP51858 240 aaKnown RBP31.35■■■□□ 2.61
NEMP1-204ENST00000554340 PPP1R15AO75807 674 aaPredicted RBP31.34■■■□□ 2.61
NEMP1-204ENST00000554340 ITGAEP38570 1179 aa31.33■■■□□ 2.61
NEMP1-204ENST00000554340 NUP155O75694 1391 aa31.33■■■□□ 2.61
NEMP1-204ENST00000554340 ROBO1Q9Y6N7 1651 aa31.31■■■□□ 2.6
NEMP1-204ENST00000554340 PPARGC1BQ86YN6 1023 aaKnown RBP31.3■■■□□ 2.6
NEMP1-204ENST00000554340 PHF23Q9BUL5 403 aaPredicted RBP31.3■■■□□ 2.6
NEMP1-204ENST00000554340 CHGAP10645 457 aaKnown RBP31.3■■■□□ 2.6
NEMP1-204ENST00000554340 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.3■■■□□ 2.6
NEMP1-204ENST00000554340 RBM33Q96EV2 1170 aaKnown RBP31.29■■■□□ 2.6
NEMP1-204ENST00000554340 DIP2AQ14689 1571 aa31.27■■■□□ 2.6
NEMP1-204ENST00000554340 SPHKAPQ2M3C7 1700 aa31.26■■■□□ 2.59
NEMP1-204ENST00000554340 MSH6P52701 1360 aa31.26■■■□□ 2.59
NEMP1-204ENST00000554340 TBX22Q9Y458 520 aa31.25■■■□□ 2.59
NEMP1-204ENST00000554340 ADAMTS13Q76LX8 1427 aa31.24■■■□□ 2.59
NEMP1-204ENST00000554340 NUTM2DQ5VT03 806 aaPredicted RBP31.19■■■□□ 2.58
NEMP1-204ENST00000554340 RRBP1Q9P2E9 1410 aaKnown RBP31.19■■■□□ 2.58
NEMP1-204ENST00000554340 PIK3R4Q99570 1358 aa31.18■■■□□ 2.58
NEMP1-204ENST00000554340 NCOA3Q9Y6Q9 1424 aa31.17■■■□□ 2.58
NEMP1-204ENST00000554340 TRPM2O94759 1503 aa31.16■■■□□ 2.58
NEMP1-204ENST00000554340 SLAIN2Q9P270 581 aa31.14■■■□□ 2.58
NEMP1-204ENST00000554340 PHLPP1O60346 1717 aa31.13■■■□□ 2.57
NEMP1-204ENST00000554340 NRXN3Q9Y4C0 1643 aa31.11■■■□□ 2.57
NEMP1-204ENST00000554340 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.1■■■□□ 2.57
NEMP1-204ENST00000554340 SETBP1Q9Y6X0 1596 aa31.09■■■□□ 2.57
NEMP1-204ENST00000554340 NAIPQ13075 1403 aa31.08■■■□□ 2.57
NEMP1-204ENST00000554340 CLTCL1P53675 1640 aa31.07■■■□□ 2.56
NEMP1-204ENST00000554340 RGS17Q9UGC6 210 aaPredicted RBP31.06■■■□□ 2.56
NEMP1-204ENST00000554340 C14orf37Q86TY3 774 aa31.05■■■□□ 2.56
NEMP1-204ENST00000554340 XRN1Q8IZH2 1706 aaKnown RBP31.05■■■□□ 2.56
NEMP1-204ENST00000554340 PTPRUQ92729 1446 aa31.05■■■□□ 2.56
NEMP1-204ENST00000554340 COL16A1Q07092 1604 aaPredicted RBP31.04■■■□□ 2.56
NEMP1-204ENST00000554340 KIF1BO60333 1816 aa31.04■■■□□ 2.56
NEMP1-204ENST00000554340 ZNF326Q5BKZ1 582 aaKnown RBP31.02■■■□□ 2.56
NEMP1-204ENST00000554340 C19orf44Q9H6X5 657 aa31.02■■■□□ 2.56
NEMP1-204ENST00000554340 AMOTL2Q9Y2J4 779 aa31.02■■■□□ 2.56
NEMP1-204ENST00000554340 CADPS2Q86UW7 1296 aa31.01■■■□□ 2.55
NEMP1-204ENST00000554340 NEXMIFQ5QGS0 1516 aa31■■■□□ 2.55
NEMP1-204ENST00000554340 JCADQ9P266 1359 aa30.99■■■□□ 2.55
NEMP1-204ENST00000554340 ATF3P18847 181 aa30.98■■■□□ 2.55
NEMP1-204ENST00000554340 AHDC1Q5TGY3 1603 aaPredicted RBP30.97■■■□□ 2.55
NEMP1-204ENST00000554340 HFM1A2PYH4 1435 aa30.96■■■□□ 2.55
NEMP1-204ENST00000554340 DCCP43146 1447 aa30.95■■■□□ 2.54
NEMP1-204ENST00000554340 METP08581 1390 aa30.92■■■□□ 2.54
NEMP1-204ENST00000554340 SHPRHQ149N8 1683 aa30.89■■■□□ 2.54
NEMP1-204ENST00000554340 POTEAQ6S8J7 498 aa30.88■■■□□ 2.53
NEMP1-204ENST00000554340 TRIM52Q96A61 297 aa30.87■■■□□ 2.53
NEMP1-204ENST00000554340 SETD1AO15047 1707 aaKnown RBP30.85■■■□□ 2.53
NEMP1-204ENST00000554340 BRINP3Q76B58 766 aa30.84■■■□□ 2.53
NEMP1-204ENST00000554340 SPATA31A6Q5VVP1 1343 aa30.84■■■□□ 2.53
NEMP1-204ENST00000554340 NALCNQ8IZF0 1738 aa30.84■■■□□ 2.53
NEMP1-204ENST00000554340 ASXL1Q8IXJ9 1541 aa30.83■■■□□ 2.53
NEMP1-204ENST00000554340 MST1RQ04912 1400 aa30.82■■■□□ 2.52
NEMP1-204ENST00000554340 ADGRL3Q9HAR2 1447 aa30.82■■■□□ 2.52
NEMP1-204ENST00000554340 LRP6O75581 1613 aa30.82■■■□□ 2.52
NEMP1-204ENST00000554340 SLC4A1APQ9BWU0 796 aaKnown RBP30.81■■■□□ 2.52
NEMP1-204ENST00000554340 NHSL1Q5SYE7 1610 aa30.81■■■□□ 2.52
NEMP1-204ENST00000554340 PPLO60437 1756 aa30.81■■■□□ 2.52
NEMP1-204ENST00000554340 VGFO15240 615 aaPredicted RBP30.78■■■□□ 2.52
NEMP1-204ENST00000554340 RPGRIP1LQ68CZ1 1315 aa30.76■■■□□ 2.51
NEMP1-204ENST00000554340 PTCH1Q13635 1447 aa30.76■■■□□ 2.51
NEMP1-204ENST00000554340 PRAG1Q86YV5 1406 aa30.71■■■□□ 2.51
NEMP1-204ENST00000554340 SETD5Q9C0A6 1442 aa30.71■■■□□ 2.51
NEMP1-204ENST00000554340 MEX3CQ5U5Q3 659 aaKnown RBP30.71■■■□□ 2.51
NEMP1-204ENST00000554340 ROBO2Q9HCK4 1378 aa30.67■■■□□ 2.5
NEMP1-204ENST00000554340 FOXD1Q16676 465 aa30.66■■■□□ 2.5
NEMP1-204ENST00000554340 ZNF772Q68DY9 489 aaPredicted RBP30.65■■■□□ 2.5
NEMP1-204ENST00000554340 LAMC1P11047 1609 aa30.64■■■□□ 2.5
NEMP1-204ENST00000554340 CCDC144AA2RUR9 1427 aa30.64■■■□□ 2.5
NEMP1-204ENST00000554340 IFT172Q9UG01 1749 aa30.64■■■□□ 2.49
NEMP1-204ENST00000554340 C1orf167Q5SNV9 1468 aa30.63■■■□□ 2.49
NEMP1-204ENST00000554340 LRRC59Q96AG4 307 aaKnown RBP30.62■■■□□ 2.49
NEMP1-204ENST00000554340 NUTM2BA6NNL0 878 aaPredicted RBP30.6■■■□□ 2.49
NEMP1-204ENST00000554340 NUTM2EB1AL46 878 aaPredicted RBP30.6■■■□□ 2.49
NEMP1-204ENST00000554340 NUTM2AQ8IVF1 878 aaPredicted RBP30.6■■■□□ 2.49
NEMP1-204ENST00000554340 SPATA31E1Q6ZUB1 1445 aa30.59■■■□□ 2.49
NEMP1-204ENST00000554340 DDX17Q92841 729 aaKnown RBP30.58■■■□□ 2.49
NEMP1-204ENST00000554340 PNPLA6Q8IY17 1366 aa30.57■■■□□ 2.48
NEMP1-204ENST00000554340 MPHOSPH9Q99550 1183 aa30.56■■■□□ 2.48
NEMP1-204ENST00000554340 CDC42BPGQ6DT37 1551 aa30.54■■■□□ 2.48
NEMP1-204ENST00000554340 ADGRF5Q8IZF2 1346 aa30.53■■■□□ 2.48
NEMP1-204ENST00000554340 ANKRD30BQ9BXX2 1392 aa30.53■■■□□ 2.48
NEMP1-204ENST00000554340 RGL3Q3MIN7 710 aa30.51■■■□□ 2.47
NEMP1-204ENST00000554340 KNDC1Q76NI1 1749 aa30.51■■■□□ 2.47
NEMP1-204ENST00000554340 AFF2P51816 1311 aa30.5■■■□□ 2.47
NEMP1-204ENST00000554340 ORAI2Q96SN7 254 aa30.5■■■□□ 2.47
NEMP1-204ENST00000554340 TECPR2O15040 1411 aa30.49■■■□□ 2.47
NEMP1-204ENST00000554340 SOS2Q07890 1332 aaPredicted RBP30.48■■■□□ 2.47
NEMP1-204ENST00000554340 ACIN1Q9UKV3 1341 aaKnown RBP30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms