RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 CEBPAP49715 358 aaPredicted RBP10.86□□□□□ -0.67
TDP1-209ENST00000554180 STAG3Q9UJ98 1225 aa10.86□□□□□ -0.67
TDP1-209ENST00000554180 PTPRMP28827 1452 aa10.86□□□□□ -0.67
TDP1-209ENST00000554180 PIK3C2GO75747 1445 aa10.85□□□□□ -0.67
TDP1-209ENST00000554180 TRPM1Q7Z4N2 1603 aa10.85□□□□□ -0.67
TDP1-209ENST00000554180 MYO3AQ8NEV4 1616 aa10.85□□□□□ -0.67
TDP1-209ENST00000554180 LAMC1P11047 1609 aa10.84□□□□□ -0.67
TDP1-209ENST00000554180 KIAA1210Q9ULL0 1709 aa10.84□□□□□ -0.67
TDP1-209ENST00000554180 ROCK2O75116 1388 aaKnown RBP10.84□□□□□ -0.67
TDP1-209ENST00000554180 ZNF316A6NFI3 1004 aaPredicted RBP10.83□□□□□ -0.68
TDP1-209ENST00000554180 HDGFP51858 240 aaKnown RBP10.83□□□□□ -0.68
TDP1-209ENST00000554180 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.83□□□□□ -0.68
TDP1-209ENST00000554180 UBR1Q8IWV7 1749 aa10.83□□□□□ -0.68
TDP1-209ENST00000554180 RIMS2Q9UQ26 1411 aa10.83□□□□□ -0.68
TDP1-209ENST00000554180 ADGRF5Q8IZF2 1346 aa10.83□□□□□ -0.68
TDP1-209ENST00000554180 ZNF142P52746 1687 aaPredicted RBP10.82□□□□□ -0.68
TDP1-209ENST00000554180 CEP170BQ9Y4F5 1589 aaPredicted RBP10.82□□□□□ -0.68
TDP1-209ENST00000554180 TMEM2Q9UHN6 1383 aa10.82□□□□□ -0.68
TDP1-209ENST00000554180 EIF4G2P78344 907 aaKnown RBP eCLIP10.82□□□□□ -0.68
TDP1-209ENST00000554180 SLIT1O75093 1534 aa10.82□□□□□ -0.68
TDP1-209ENST00000554180 SETBP1Q9Y6X0 1596 aa10.82□□□□□ -0.68
TDP1-209ENST00000554180 ARHGAP23Q9P227 1491 aa10.81□□□□□ -0.68
TDP1-209ENST00000554180 SETD1BQ9UPS6 1966 aaKnown RBP10.81□□□□□ -0.68
TDP1-209ENST00000554180 USP47Q96K76 1375 aa10.81□□□□□ -0.68
TDP1-209ENST00000554180 CARD11Q9BXL7 1154 aa10.81□□□□□ -0.68
TDP1-209ENST00000554180 MYO5BQ9ULV0 1848 aa10.81□□□□□ -0.68
TDP1-209ENST00000554180 THEMISQ8N1K5 641 aaPredicted RBP10.8□□□□□ -0.68
TDP1-209ENST00000554180 C14orf93Q9H972 538 aaKnown RBP10.8□□□□□ -0.68
TDP1-209ENST00000554180 SCAF11Q99590 1463 aaKnown RBP10.79□□□□□ -0.68
TDP1-209ENST00000554180 ADGRB1O14514 1584 aa10.78□□□□□ -0.68
TDP1-209ENST00000554180 HSPA5P11021 654 aaKnown RBP10.78□□□□□ -0.68
TDP1-209ENST00000554180 NBPF1Q3BBV0 1214 aa10.78□□□□□ -0.68
TDP1-209ENST00000554180 EIF3AQ14152 1382 aaKnown RBP10.77□□□□□ -0.68
TDP1-209ENST00000554180 CFAP70Q5T0N1 1121 aa10.77□□□□□ -0.69
TDP1-209ENST00000554180 PLPPR3Q6T4P5 718 aa10.77□□□□□ -0.69
TDP1-209ENST00000554180 PLEKHG1Q9ULL1 1385 aa10.77□□□□□ -0.69
TDP1-209ENST00000554180 EID1Q9Y6B2 187 aa10.76□□□□□ -0.69
TDP1-209ENST00000554180 KDM4FA0A1W2PPD8 638 aa10.75□□□□□ -0.69
TDP1-209ENST00000554180 NUTM2DQ5VT03 806 aaPredicted RBP10.75□□□□□ -0.69
TDP1-209ENST00000554180 IQGAP1P46940 1657 aa10.75□□□□□ -0.69
TDP1-209ENST00000554180 ALKQ9UM73 1620 aa10.74□□□□□ -0.69
TDP1-209ENST00000554180 ASXL1Q8IXJ9 1541 aa10.74□□□□□ -0.69
TDP1-209ENST00000554180 DIP2AQ14689 1571 aa10.73□□□□□ -0.69
TDP1-209ENST00000554180 NRXN3Q9Y4C0 1643 aa10.73□□□□□ -0.69
TDP1-209ENST00000554180 SLC24A1O60721 1099 aa10.73□□□□□ -0.69
TDP1-209ENST00000554180 LTKP29376 864 aa10.73□□□□□ -0.69
TDP1-209ENST00000554180 TXNDC2Q86VQ3 553 aa10.73□□□□□ -0.69
TDP1-209ENST00000554180 ST20-MTHFSA0A0A6YYL1 179 aa10.72□□□□□ -0.69
TDP1-209ENST00000554180 SBNO2Q9Y2G9 1366 aa10.72□□□□□ -0.69
TDP1-209ENST00000554180 ADAMTS13Q76LX8 1427 aa10.72□□□□□ -0.69
TDP1-209ENST00000554180 MED14O60244 1454 aa10.72□□□□□ -0.69
TDP1-209ENST00000554180 SETD1AO15047 1707 aaKnown RBP10.72□□□□□ -0.69
TDP1-209ENST00000554180 ANKLE2Q86XL3 938 aa10.71□□□□□ -0.69
TDP1-209ENST00000554180 YTHDC2Q9H6S0 1430 aaKnown RBP10.71□□□□□ -0.69
TDP1-209ENST00000554180 DLC1Q96QB1 1528 aa10.7□□□□□ -0.7
TDP1-209ENST00000554180 TECPR2O15040 1411 aa10.7□□□□□ -0.7
TDP1-209ENST00000554180 LRPPRCP42704 1394 aaKnown RBP10.7□□□□□ -0.7
TDP1-209ENST00000554180 ABCC11Q96J66 1382 aa10.69□□□□□ -0.7
TDP1-209ENST00000554180 PIK3R4Q99570 1358 aa10.69□□□□□ -0.7
TDP1-209ENST00000554180 TESK2Q96S53 571 aa10.69□□□□□ -0.7
TDP1-209ENST00000554180 HIRIP3Q9BW71 556 aaPredicted RBP10.69□□□□□ -0.7
TDP1-209ENST00000554180 TBX22Q9Y458 520 aa10.69□□□□□ -0.7
TDP1-209ENST00000554180 CCDC7Q96M83 1385 aa10.68□□□□□ -0.7
TDP1-209ENST00000554180 WASHC2AQ641Q2 1341 aa10.68□□□□□ -0.7
TDP1-209ENST00000554180 CENPJQ9HC77 1338 aaPredicted RBP10.68□□□□□ -0.7
TDP1-209ENST00000554180 TMEM132EQ6IEE7 984 aa10.68□□□□□ -0.7
TDP1-209ENST00000554180 POLR1AO95602 1720 aaPredicted RBP10.67□□□□□ -0.7
TDP1-209ENST00000554180 METP08581 1390 aa10.67□□□□□ -0.7
TDP1-209ENST00000554180 TMF1P82094 1093 aa10.67□□□□□ -0.7
TDP1-209ENST00000554180 SIRT1Q96EB6 747 aa10.67□□□□□ -0.7
TDP1-209ENST00000554180 BCANQ96GW7 911 aa10.67□□□□□ -0.7
TDP1-209ENST00000554180 CPS1P31327 1500 aa10.67□□□□□ -0.7
TDP1-209ENST00000554180 LMTK3Q96Q04 1460 aa10.67□□□□□ -0.7
TDP1-209ENST00000554180 ARHGEF28Q8N1W1 1705 aaKnown RBP10.67□□□□□ -0.7
TDP1-209ENST00000554180 FAM135BQ49AJ0 1406 aa10.67□□□□□ -0.7
TDP1-209ENST00000554180 KIF7Q2M1P5 1343 aa10.66□□□□□ -0.7
TDP1-209ENST00000554180 CDCA8Q53HL2 280 aa10.66□□□□□ -0.7
TDP1-209ENST00000554180 TRAK1Q9UPV9 953 aa10.66□□□□□ -0.7
TDP1-209ENST00000554180 KNDC1Q76NI1 1749 aa10.66□□□□□ -0.7
TDP1-209ENST00000554180 NPHP4O75161 1426 aaPredicted RBP10.66□□□□□ -0.7
TDP1-209ENST00000554180 DIEXFQ68CQ4 756 aaKnown RBP10.65□□□□□ -0.7
TDP1-209ENST00000554180 PTCH1Q13635 1447 aa10.65□□□□□ -0.7
TDP1-209ENST00000554180 C11orf95C9JLR9 678 aaPredicted RBP10.64□□□□□ -0.71
TDP1-209ENST00000554180 DISP3Q9P2K9 1392 aa10.64□□□□□ -0.71
TDP1-209ENST00000554180 PUS7Q96PZ0 661 aaKnown RBP10.63□□□□□ -0.71
TDP1-209ENST00000554180 SLC26A8Q96RN1 970 aa10.63□□□□□ -0.71
TDP1-209ENST00000554180 STK26Q9P289 416 aa10.63□□□□□ -0.71
TDP1-209ENST00000554180 QRICH2Q9H0J4 1663 aa10.63□□□□□ -0.71
TDP1-209ENST00000554180 XRN1Q8IZH2 1706 aaKnown RBP10.62□□□□□ -0.71
TDP1-209ENST00000554180 PTPRUQ92729 1446 aa10.62□□□□□ -0.71
TDP1-209ENST00000554180 PRAM1Q96QH2 718 aa10.62□□□□□ -0.71
TDP1-209ENST00000554180 SENP3Q9H4L4 574 aaPredicted RBP10.62□□□□□ -0.71
TDP1-209ENST00000554180 POGKQ9P215 609 aa10.62□□□□□ -0.71
TDP1-209ENST00000554180 EVC2Q86UK5 1308 aa10.6□□□□□ -0.71
TDP1-209ENST00000554180 DDX10Q13206 875 aaKnown RBP10.6□□□□□ -0.71
TDP1-209ENST00000554180 ROBO2Q9HCK4 1378 aa10.6□□□□□ -0.71
TDP1-209ENST00000554180 NWD1Q149M9 1564 aa10.6□□□□□ -0.71
TDP1-209ENST00000554180 NCKAP5LQ9HCH0 1330 aa10.59□□□□□ -0.71
TDP1-209ENST00000554180 TULP4Q9NRJ4 1543 aa10.59□□□□□ -0.71
TDP1-209ENST00000554180 AMOTL2Q9Y2J4 779 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms