RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 SLC26A8Q96RN1 970 aa19.49■□□□□ 0.71
XRCC3-206ENST00000554170 PROSER2Q86WR7 435 aaPredicted RBP19.48■□□□□ 0.71
XRCC3-206ENST00000554170 CHD2O14647 1828 aaKnown RBP19.46■□□□□ 0.71
XRCC3-206ENST00000554170 RBM33Q96EV2 1170 aaKnown RBP19.46■□□□□ 0.71
XRCC3-206ENST00000554170 ADGRL2O95490 1459 aa19.46■□□□□ 0.71
XRCC3-206ENST00000554170 SLC52A1Q9NWF4 448 aa19.45■□□□□ 0.7
XRCC3-206ENST00000554170 RPRD2Q5VT52 1461 aaKnown RBP19.45■□□□□ 0.7
XRCC3-206ENST00000554170 PHLPP1O60346 1717 aa19.45■□□□□ 0.7
XRCC3-206ENST00000554170 GCC2Q8IWJ2 1684 aa19.44■□□□□ 0.7
XRCC3-206ENST00000554170 MSH6P52701 1360 aa19.44■□□□□ 0.7
XRCC3-206ENST00000554170 POTEAQ6S8J7 498 aa19.43■□□□□ 0.7
XRCC3-206ENST00000554170 ZFYVE9O95405 1425 aa19.42■□□□□ 0.7
XRCC3-206ENST00000554170 ROCK1Q13464 1354 aa19.42■□□□□ 0.7
XRCC3-206ENST00000554170 TMEM131LA2VDJ0 1609 aa19.4■□□□□ 0.7
XRCC3-206ENST00000554170 BCANQ96GW7 911 aa19.4■□□□□ 0.7
XRCC3-206ENST00000554170 PLEKHG1Q9ULL1 1385 aa19.4■□□□□ 0.7
XRCC3-206ENST00000554170 SETD1AO15047 1707 aaKnown RBP19.38■□□□□ 0.69
XRCC3-206ENST00000554170 SLAIN2Q9P270 581 aa19.38■□□□□ 0.69
XRCC3-206ENST00000554170 ANKRD50Q9ULJ7 1429 aa19.38■□□□□ 0.69
XRCC3-206ENST00000554170 RIMS2Q9UQ26 1411 aa19.37■□□□□ 0.69
XRCC3-206ENST00000554170 COL16A1Q07092 1604 aaPredicted RBP19.36■□□□□ 0.69
XRCC3-206ENST00000554170 JCADQ9P266 1359 aa19.36■□□□□ 0.69
XRCC3-206ENST00000554170 PPP1R15AO75807 674 aaPredicted RBP19.35■□□□□ 0.69
XRCC3-206ENST00000554170 UNC13BO14795 1591 aa19.35■□□□□ 0.69
XRCC3-206ENST00000554170 HDGFP51858 240 aaKnown RBP19.34■□□□□ 0.69
XRCC3-206ENST00000554170 E9PCH4 1651 aa19.33■□□□□ 0.69
XRCC3-206ENST00000554170 NCOA3Q9Y6Q9 1424 aa19.33■□□□□ 0.68
XRCC3-206ENST00000554170 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.32■□□□□ 0.68
XRCC3-206ENST00000554170 DIP2AQ14689 1571 aa19.32■□□□□ 0.68
XRCC3-206ENST00000554170 TBX22Q9Y458 520 aa19.31■□□□□ 0.68
XRCC3-206ENST00000554170 ADAMTS13Q76LX8 1427 aa19.3■□□□□ 0.68
XRCC3-206ENST00000554170 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.29■□□□□ 0.68
XRCC3-206ENST00000554170 AHDC1Q5TGY3 1603 aaPredicted RBP19.29■□□□□ 0.68
XRCC3-206ENST00000554170 SHPRHQ149N8 1683 aa19.28■□□□□ 0.68
XRCC3-206ENST00000554170 LRP6O75581 1613 aa19.28■□□□□ 0.68
XRCC3-206ENST00000554170 IQGAP3Q86VI3 1631 aa19.27■□□□□ 0.68
XRCC3-206ENST00000554170 PIK3R4Q99570 1358 aa19.27■□□□□ 0.68
XRCC3-206ENST00000554170 SPATA31A6Q5VVP1 1343 aa19.26■□□□□ 0.67
XRCC3-206ENST00000554170 C14orf37Q86TY3 774 aa19.26■□□□□ 0.67
XRCC3-206ENST00000554170 CHGAP10645 457 aaKnown RBP19.25■□□□□ 0.67
XRCC3-206ENST00000554170 CADPS2Q86UW7 1296 aa19.25■□□□□ 0.67
XRCC3-206ENST00000554170 TRPM2O94759 1503 aa19.25■□□□□ 0.67
XRCC3-206ENST00000554170 NUTM2DQ5VT03 806 aaPredicted RBP19.24■□□□□ 0.67
XRCC3-206ENST00000554170 C19orf44Q9H6X5 657 aa19.24■□□□□ 0.67
XRCC3-206ENST00000554170 ATF3P18847 181 aa19.23■□□□□ 0.67
XRCC3-206ENST00000554170 NAIPQ13075 1403 aa19.23■□□□□ 0.67
XRCC3-206ENST00000554170 HFM1A2PYH4 1435 aa19.22■□□□□ 0.67
XRCC3-206ENST00000554170 MEX3CQ5U5Q3 659 aaKnown RBP19.21■□□□□ 0.67
XRCC3-206ENST00000554170 NUP155O75694 1391 aa19.2■□□□□ 0.66
XRCC3-206ENST00000554170 ZNF772Q68DY9 489 aaPredicted RBP19.2■□□□□ 0.66
XRCC3-206ENST00000554170 XRN1Q8IZH2 1706 aaKnown RBP19.2■□□□□ 0.66
XRCC3-206ENST00000554170 PTPRUQ92729 1446 aa19.19■□□□□ 0.66
XRCC3-206ENST00000554170 NRXN3Q9Y4C0 1643 aa19.19■□□□□ 0.66
XRCC3-206ENST00000554170 DCCP43146 1447 aa19.18■□□□□ 0.66
XRCC3-206ENST00000554170 BRINP3Q76B58 766 aa19.17■□□□□ 0.66
XRCC3-206ENST00000554170 AMOTL2Q9Y2J4 779 aa19.17■□□□□ 0.66
XRCC3-206ENST00000554170 SPHKAPQ2M3C7 1700 aa19.17■□□□□ 0.66
XRCC3-206ENST00000554170 SETBP1Q9Y6X0 1596 aa19.16■□□□□ 0.66
XRCC3-206ENST00000554170 TRIM52Q96A61 297 aa19.16■□□□□ 0.66
XRCC3-206ENST00000554170 ASXL1Q8IXJ9 1541 aa19.15■□□□□ 0.66
XRCC3-206ENST00000554170 NHSL1Q5SYE7 1610 aa19.15■□□□□ 0.66
XRCC3-206ENST00000554170 UPF1Q92900 1129 aaKnown RBP eCLIP19.14■□□□□ 0.65
XRCC3-206ENST00000554170 ACIN1Q9UKV3 1341 aaKnown RBP19.12■□□□□ 0.65
XRCC3-206ENST00000554170 MST1RQ04912 1400 aa19.11■□□□□ 0.65
XRCC3-206ENST00000554170 SETD5Q9C0A6 1442 aa19.11■□□□□ 0.65
XRCC3-206ENST00000554170 CDK12Q9NYV4 1490 aaPredicted RBP19.1■□□□□ 0.65
XRCC3-206ENST00000554170 RXRBP28702 533 aa19.1■□□□□ 0.65
XRCC3-206ENST00000554170 NUTM2BA6NNL0 878 aaPredicted RBP19.09■□□□□ 0.65
XRCC3-206ENST00000554170 NUTM2EB1AL46 878 aaPredicted RBP19.09■□□□□ 0.65
XRCC3-206ENST00000554170 NUTM2AQ8IVF1 878 aaPredicted RBP19.09■□□□□ 0.65
XRCC3-206ENST00000554170 NALCNQ8IZF0 1738 aa19.08■□□□□ 0.65
XRCC3-206ENST00000554170 METP08581 1390 aa19.07■□□□□ 0.64
XRCC3-206ENST00000554170 AFF2P51816 1311 aa19.06■□□□□ 0.64
XRCC3-206ENST00000554170 ADGRL3Q9HAR2 1447 aa19.06■□□□□ 0.64
XRCC3-206ENST00000554170 KIF1BO60333 1816 aa19.05■□□□□ 0.64
XRCC3-206ENST00000554170 CLTCL1P53675 1640 aa19.05■□□□□ 0.64
XRCC3-206ENST00000554170 ZNF326Q5BKZ1 582 aaKnown RBP19.05■□□□□ 0.64
XRCC3-206ENST00000554170 SLC4A1APQ9BWU0 796 aaKnown RBP19.05■□□□□ 0.64
XRCC3-206ENST00000554170 NEXMIFQ5QGS0 1516 aa19.05■□□□□ 0.64
XRCC3-206ENST00000554170 LRRC59Q96AG4 307 aaKnown RBP19.04■□□□□ 0.64
XRCC3-206ENST00000554170 LAMC1P11047 1609 aa19.02■□□□□ 0.64
XRCC3-206ENST00000554170 PNPLA6Q8IY17 1366 aa19.02■□□□□ 0.64
XRCC3-206ENST00000554170 DDX17Q92841 729 aaKnown RBP19.01■□□□□ 0.63
XRCC3-206ENST00000554170 RAB3GAP2Q9H2M9 1393 aa19.01■□□□□ 0.63
XRCC3-206ENST00000554170 C8orf37Q96NL8 207 aa19■□□□□ 0.63
XRCC3-206ENST00000554170 RGS12O14924 1447 aa19■□□□□ 0.63
XRCC3-206ENST00000554170 HRCP23327 699 aa18.98■□□□□ 0.63
XRCC3-206ENST00000554170 MPHOSPH9Q99550 1183 aa18.98■□□□□ 0.63
XRCC3-206ENST00000554170 C1orf167Q5SNV9 1468 aa18.97■□□□□ 0.63
XRCC3-206ENST00000554170 RBM6P78332 1123 aaKnown RBP18.97■□□□□ 0.63
XRCC3-206ENST00000554170 QTRT2Q9H974 415 aaKnown RBP18.97■□□□□ 0.63
XRCC3-206ENST00000554170 PTCH1Q13635 1447 aa18.97■□□□□ 0.63
XRCC3-206ENST00000554170 TRIM26Q12899 539 aaPredicted RBP18.94■□□□□ 0.62
XRCC3-206ENST00000554170 PRAG1Q86YV5 1406 aa18.92■□□□□ 0.62
XRCC3-206ENST00000554170 ADAMTS2O95450 1211 aa18.92■□□□□ 0.62
XRCC3-206ENST00000554170 NGLY1Q96IV0 654 aa18.92■□□□□ 0.62
XRCC3-206ENST00000554170 SOS2Q07890 1332 aaPredicted RBP18.92■□□□□ 0.62
XRCC3-206ENST00000554170 ROBO2Q9HCK4 1378 aa18.92■□□□□ 0.62
XRCC3-206ENST00000554170 PPLO60437 1756 aa18.91■□□□□ 0.62
XRCC3-206ENST00000554170 COL22A1Q8NFW1 1626 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms