RNA–Protein interactions for RNA: ENST00000554057.5

MTHFD1-205, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-205ENST00000554057 NKTRP30414 1462 aaKnown RBP10.67□□□□□ -0.7
MTHFD1-205ENST00000554057 ANKRD30AQ9BXX3 1397 aa10.66□□□□□ -0.7
MTHFD1-205ENST00000554057 KCNA6P17658 529 aa10.66□□□□□ -0.7
MTHFD1-205ENST00000554057 PROSER2Q86WR7 435 aaPredicted RBP10.66□□□□□ -0.7
MTHFD1-205ENST00000554057 POTEAQ6S8J7 498 aa10.65□□□□□ -0.7
MTHFD1-205ENST00000554057 MYO5BQ9ULV0 1848 aa10.65□□□□□ -0.71
MTHFD1-205ENST00000554057 SETD1AO15047 1707 aaKnown RBP10.64□□□□□ -0.71
MTHFD1-205ENST00000554057 APLP2Q06481 763 aa10.64□□□□□ -0.71
MTHFD1-205ENST00000554057 MSH6P52701 1360 aa10.64□□□□□ -0.71
MTHFD1-205ENST00000554057 GCC2Q8IWJ2 1684 aa10.63□□□□□ -0.71
MTHFD1-205ENST00000554057 ADGRL2O95490 1459 aa10.63□□□□□ -0.71
MTHFD1-205ENST00000554057 BCANQ96GW7 911 aa10.63□□□□□ -0.71
MTHFD1-205ENST00000554057 PHLPP1O60346 1717 aa10.63□□□□□ -0.71
MTHFD1-205ENST00000554057 ZFYVE9O95405 1425 aa10.62□□□□□ -0.71
MTHFD1-205ENST00000554057 CHD2O14647 1828 aaKnown RBP10.61□□□□□ -0.71
MTHFD1-205ENST00000554057 RIMS2Q9UQ26 1411 aa10.61□□□□□ -0.71
MTHFD1-205ENST00000554057 SLC52A1Q9NWF4 448 aa10.61□□□□□ -0.71
MTHFD1-205ENST00000554057 PLEKHG1Q9ULL1 1385 aa10.61□□□□□ -0.71
MTHFD1-205ENST00000554057 RPRD2Q5VT52 1461 aaKnown RBP10.61□□□□□ -0.71
MTHFD1-205ENST00000554057 ANKRD50Q9ULJ7 1429 aa10.6□□□□□ -0.71
MTHFD1-205ENST00000554057 TMEM131LA2VDJ0 1609 aa10.6□□□□□ -0.71
MTHFD1-205ENST00000554057 COL16A1Q07092 1604 aaPredicted RBP10.6□□□□□ -0.71
MTHFD1-205ENST00000554057 PPP1R15AO75807 674 aaPredicted RBP10.6□□□□□ -0.71
MTHFD1-205ENST00000554057 FAM50AQ14320 339 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-205ENST00000554057 JCADQ9P266 1359 aa10.59□□□□□ -0.71
MTHFD1-205ENST00000554057 CENPBP07199 599 aaPredicted RBP10.58□□□□□ -0.72
MTHFD1-205ENST00000554057 SLAIN2Q9P270 581 aa10.58□□□□□ -0.72
MTHFD1-205ENST00000554057 LRP6O75581 1613 aa10.58□□□□□ -0.72
MTHFD1-205ENST00000554057 ACIN1Q9UKV3 1341 aaKnown RBP10.58□□□□□ -0.72
MTHFD1-205ENST00000554057 UNC13BO14795 1591 aa10.57□□□□□ -0.72
MTHFD1-205ENST00000554057 DIEXFQ68CQ4 756 aaKnown RBP10.57□□□□□ -0.72
MTHFD1-205ENST00000554057 CHGAP10645 457 aaKnown RBP10.56□□□□□ -0.72
MTHFD1-205ENST00000554057 NUTM2DQ5VT03 806 aaPredicted RBP10.56□□□□□ -0.72
MTHFD1-205ENST00000554057 C14orf37Q86TY3 774 aa10.56□□□□□ -0.72
MTHFD1-205ENST00000554057 ADAMTS13Q76LX8 1427 aa10.56□□□□□ -0.72
MTHFD1-205ENST00000554057 E9PCH4 1651 aa10.56□□□□□ -0.72
MTHFD1-205ENST00000554057 DIP2AQ14689 1571 aa10.56□□□□□ -0.72
MTHFD1-205ENST00000554057 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.55□□□□□ -0.72
MTHFD1-205ENST00000554057 AHDC1Q5TGY3 1603 aaPredicted RBP10.55□□□□□ -0.72
MTHFD1-205ENST00000554057 TBX22Q9Y458 520 aa10.54□□□□□ -0.72
MTHFD1-205ENST00000554057 SHPRHQ149N8 1683 aa10.53□□□□□ -0.72
MTHFD1-205ENST00000554057 NCOA3Q9Y6Q9 1424 aa10.53□□□□□ -0.72
MTHFD1-205ENST00000554057 ZNF316A6NFI3 1004 aaPredicted RBP10.53□□□□□ -0.72
MTHFD1-205ENST00000554057 HDGFP51858 240 aaKnown RBP10.53□□□□□ -0.72
MTHFD1-205ENST00000554057 MEX3CQ5U5Q3 659 aaKnown RBP10.53□□□□□ -0.72
MTHFD1-205ENST00000554057 IQGAP3Q86VI3 1631 aa10.53□□□□□ -0.72
MTHFD1-205ENST00000554057 TRPM2O94759 1503 aa10.53□□□□□ -0.72
MTHFD1-205ENST00000554057 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.52□□□□□ -0.73
MTHFD1-205ENST00000554057 SPATA31A6Q5VVP1 1343 aa10.52□□□□□ -0.73
MTHFD1-205ENST00000554057 PTPRUQ92729 1446 aa10.51□□□□□ -0.73
MTHFD1-205ENST00000554057 ATF3P18847 181 aa10.51□□□□□ -0.73
MTHFD1-205ENST00000554057 CADPS2Q86UW7 1296 aa10.51□□□□□ -0.73
MTHFD1-205ENST00000554057 TRIM52Q96A61 297 aa10.51□□□□□ -0.73
MTHFD1-205ENST00000554057 PIK3R4Q99570 1358 aa10.51□□□□□ -0.73
MTHFD1-205ENST00000554057 C19orf44Q9H6X5 657 aa10.5□□□□□ -0.73
MTHFD1-205ENST00000554057 NRXN3Q9Y4C0 1643 aa10.5□□□□□ -0.73
MTHFD1-205ENST00000554057 XRN1Q8IZH2 1706 aaKnown RBP10.5□□□□□ -0.73
MTHFD1-205ENST00000554057 ASXL1Q8IXJ9 1541 aa10.49□□□□□ -0.73
MTHFD1-205ENST00000554057 ZNF772Q68DY9 489 aaPredicted RBP10.49□□□□□ -0.73
MTHFD1-205ENST00000554057 BRINP3Q76B58 766 aa10.49□□□□□ -0.73
MTHFD1-205ENST00000554057 CLSPNQ9HAW4 1339 aa10.49□□□□□ -0.73
MTHFD1-205ENST00000554057 NUTM2BA6NNL0 878 aaPredicted RBP10.48□□□□□ -0.73
MTHFD1-205ENST00000554057 NUTM2EB1AL46 878 aaPredicted RBP10.48□□□□□ -0.73
MTHFD1-205ENST00000554057 NUTM2AQ8IVF1 878 aaPredicted RBP10.48□□□□□ -0.73
MTHFD1-205ENST00000554057 AMOTL2Q9Y2J4 779 aa10.48□□□□□ -0.73
MTHFD1-205ENST00000554057 NUP155O75694 1391 aa10.48□□□□□ -0.73
MTHFD1-205ENST00000554057 ROCK1Q13464 1354 aa10.48□□□□□ -0.73
MTHFD1-205ENST00000554057 SETBP1Q9Y6X0 1596 aa10.48□□□□□ -0.73
MTHFD1-205ENST00000554057 UPF1Q92900 1129 aaKnown RBP eCLIP10.47□□□□□ -0.73
MTHFD1-205ENST00000554057 DCCP43146 1447 aa10.47□□□□□ -0.73
MTHFD1-205ENST00000554057 MST1RQ04912 1400 aa10.47□□□□□ -0.73
MTHFD1-205ENST00000554057 NHSL1Q5SYE7 1610 aa10.47□□□□□ -0.73
MTHFD1-205ENST00000554057 SPHKAPQ2M3C7 1700 aa10.47□□□□□ -0.73
MTHFD1-205ENST00000554057 AFF2P51816 1311 aa10.45□□□□□ -0.74
MTHFD1-205ENST00000554057 ITGAEP38570 1179 aa10.45□□□□□ -0.74
MTHFD1-205ENST00000554057 NEUROD1Q13562 356 aa10.45□□□□□ -0.74
MTHFD1-205ENST00000554057 NALCNQ8IZF0 1738 aa10.44□□□□□ -0.74
MTHFD1-205ENST00000554057 CDK12Q9NYV4 1490 aaPredicted RBP10.44□□□□□ -0.74
MTHFD1-205ENST00000554057 SETD5Q9C0A6 1442 aa10.44□□□□□ -0.74
MTHFD1-205ENST00000554057 METP08581 1390 aa10.44□□□□□ -0.74
MTHFD1-205ENST00000554057 RXRBP28702 533 aa10.44□□□□□ -0.74
MTHFD1-205ENST00000554057 RGS12O14924 1447 aa10.43□□□□□ -0.74
MTHFD1-205ENST00000554057 ADGRL3Q9HAR2 1447 aa10.43□□□□□ -0.74
MTHFD1-205ENST00000554057 ZNF326Q5BKZ1 582 aaKnown RBP10.43□□□□□ -0.74
MTHFD1-205ENST00000554057 DDX17Q92841 729 aaKnown RBP10.43□□□□□ -0.74
MTHFD1-205ENST00000554057 NEXMIFQ5QGS0 1516 aa10.43□□□□□ -0.74
MTHFD1-205ENST00000554057 CLTCL1P53675 1640 aa10.42□□□□□ -0.74
MTHFD1-205ENST00000554057 PNPLA6Q8IY17 1366 aa10.41□□□□□ -0.74
MTHFD1-205ENST00000554057 C8orf37Q96NL8 207 aa10.41□□□□□ -0.74
MTHFD1-205ENST00000554057 C1orf167Q5SNV9 1468 aa10.39□□□□□ -0.75
MTHFD1-205ENST00000554057 LRRC59Q96AG4 307 aaKnown RBP10.39□□□□□ -0.75
MTHFD1-205ENST00000554057 PTCH1Q13635 1447 aa10.38□□□□□ -0.75
MTHFD1-205ENST00000554057 KIF1BO60333 1816 aa10.37□□□□□ -0.75
MTHFD1-205ENST00000554057 ADAMTS2O95450 1211 aa10.37□□□□□ -0.75
MTHFD1-205ENST00000554057 RBM6P78332 1123 aaKnown RBP10.37□□□□□ -0.75
MTHFD1-205ENST00000554057 QTRT2Q9H974 415 aaKnown RBP10.37□□□□□ -0.75
MTHFD1-205ENST00000554057 ROBO2Q9HCK4 1378 aa10.37□□□□□ -0.75
MTHFD1-205ENST00000554057 LAMC1P11047 1609 aa10.36□□□□□ -0.75
MTHFD1-205ENST00000554057 GTF3C3Q9Y5Q9 886 aa10.36□□□□□ -0.75
MTHFD1-205ENST00000554057 NGLY1Q96IV0 654 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms