RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 DDX11L8A8MPP1 907 aa10.77□□□□□ -0.69
FOXN3-206ENST00000554005 FAM98CQ17RN3 349 aaKnown RBP10.77□□□□□ -0.69
FOXN3-206ENST00000554005 SH3D19Q5HYK7 790 aa10.77□□□□□ -0.69
FOXN3-206ENST00000554005 BHMG1C9JSJ3 638 aaPredicted RBP10.76□□□□□ -0.69
FOXN3-206ENST00000554005 SWT1Q5T5J6 900 aaKnown RBP10.76□□□□□ -0.69
FOXN3-206ENST00000554005 NBPF3Q9H094 633 aa10.76□□□□□ -0.69
FOXN3-206ENST00000554005 ADGRD1Q6QNK2 874 aa10.75□□□□□ -0.69
FOXN3-206ENST00000554005 RSPH6AQ9H0K4 717 aa10.75□□□□□ -0.69
FOXN3-206ENST00000554005 LAPTM4BQ86VI4 370 aa10.74□□□□□ -0.69
FOXN3-206ENST00000554005 TBC1D2Q9BYX2 928 aa10.73□□□□□ -0.69
FOXN3-206ENST00000554005 TIMELESSQ9UNS1 1208 aa10.73□□□□□ -0.69
FOXN3-206ENST00000554005 SKIV2LQ15477 1246 aaKnown RBP10.72□□□□□ -0.69
FOXN3-206ENST00000554005 MYSM1Q5VVJ2 828 aa10.72□□□□□ -0.69
FOXN3-206ENST00000554005 PCMTD1Q96MG8 357 aaPredicted RBP10.72□□□□□ -0.69
FOXN3-206ENST00000554005 SAMD7Q7Z3H4 446 aa10.71□□□□□ -0.69
FOXN3-206ENST00000554005 RDH13Q8NBN7 331 aa10.71□□□□□ -0.69
FOXN3-206ENST00000554005 SPIRE2Q8WWL2 714 aa10.71□□□□□ -0.69
FOXN3-206ENST00000554005 HRO43593 1189 aa10.7□□□□□ -0.7
FOXN3-206ENST00000554005 SLC10A3P09131 477 aa10.69□□□□□ -0.7
FOXN3-206ENST00000554005 DIXDC1Q155Q3 683 aa10.69□□□□□ -0.7
FOXN3-206ENST00000554005 MRPL50Q8N5N7 158 aaKnown RBP10.69□□□□□ -0.7
FOXN3-206ENST00000554005 ZFRQ96KR1 1074 aaKnown RBP10.69□□□□□ -0.7
FOXN3-206ENST00000554005 POLR3EQ9NVU0 708 aa10.69□□□□□ -0.7
FOXN3-206ENST00000554005 HDGFP51858 240 aaKnown RBP10.68□□□□□ -0.7
FOXN3-206ENST00000554005 ANKRD13DQ6ZTN6 518 aa10.68□□□□□ -0.7
FOXN3-206ENST00000554005 CLK2P49760 499 aaKnown RBP10.67□□□□□ -0.7
FOXN3-206ENST00000554005 NUTM1Q86Y26 1132 aa10.67□□□□□ -0.7
FOXN3-206ENST00000554005 PROCA1Q8NCQ7 364 aaPredicted RBP10.67□□□□□ -0.7
FOXN3-206ENST00000554005 GCGRP47871 477 aa10.66□□□□□ -0.7
FOXN3-206ENST00000554005 RSPH4AQ5TD94 716 aa10.66□□□□□ -0.7
FOXN3-206ENST00000554005 SLF2Q8IX21 1173 aa10.66□□□□□ -0.7
FOXN3-206ENST00000554005 KRTAP3-3Q9BYR6 98 aa10.66□□□□□ -0.7
FOXN3-206ENST00000554005 KRTAP3-2Q9BYR7 98 aa10.66□□□□□ -0.7
FOXN3-206ENST00000554005 SLC4A3P48751 1232 aa10.65□□□□□ -0.7
FOXN3-206ENST00000554005 KDM4AO75164 1064 aa10.64□□□□□ -0.71
FOXN3-206ENST00000554005 ERICH6Q7L0X2 663 aa10.64□□□□□ -0.71
FOXN3-206ENST00000554005 C14orf37Q86TY3 774 aa10.64□□□□□ -0.71
FOXN3-206ENST00000554005 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.64□□□□□ -0.71
FOXN3-206ENST00000554005 LIMD1Q9UGP4 676 aa10.64□□□□□ -0.71
FOXN3-206ENST00000554005 MOXD2PA6NHM9 499 aa10.63□□□□□ -0.71
FOXN3-206ENST00000554005 RNF40O75150 1001 aa10.63□□□□□ -0.71
FOXN3-206ENST00000554005 RIC3Q7Z5B4 369 aa10.63□□□□□ -0.71
FOXN3-206ENST00000554005 SPTLC1O15269 473 aa10.62□□□□□ -0.71
FOXN3-206ENST00000554005 RSBN1LQ6PCB5 846 aaPredicted RBP10.62□□□□□ -0.71
FOXN3-206ENST00000554005 LRCH3Q96II8 777 aa10.62□□□□□ -0.71
FOXN3-206ENST00000554005 CFHP08603 1231 aa10.61□□□□□ -0.71
FOXN3-206ENST00000554005 NDUFV2P19404 249 aa10.61□□□□□ -0.71
FOXN3-206ENST00000554005 USP46P62068 366 aa10.61□□□□□ -0.71
FOXN3-206ENST00000554005 STAC3Q96MF2 364 aa10.61□□□□□ -0.71
FOXN3-206ENST00000554005 ATP1B4Q9UN42 357 aaPredicted RBP10.61□□□□□ -0.71
FOXN3-206ENST00000554005 HOXA2O43364 376 aa10.6□□□□□ -0.71
FOXN3-206ENST00000554005 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.6□□□□□ -0.71
FOXN3-206ENST00000554005 GOLGA8CPA6NN73 597 aa10.59□□□□□ -0.71
FOXN3-206ENST00000554005 GJA5P36382 358 aa10.59□□□□□ -0.71
FOXN3-206ENST00000554005 TUSC1Q2TAM9 212 aa10.59□□□□□ -0.71
FOXN3-206ENST00000554005 ANKK1Q8NFD2 765 aa10.59□□□□□ -0.71
FOXN3-206ENST00000554005 FBXO31Q5XUX0 539 aaPredicted RBP10.58□□□□□ -0.72
FOXN3-206ENST00000554005 POTEGQ6S5H5 508 aa10.57□□□□□ -0.72
FOXN3-206ENST00000554005 SOWAHBA6NEL2 793 aa10.56□□□□□ -0.72
FOXN3-206ENST00000554005 BCAMP50895 628 aa10.56□□□□□ -0.72
FOXN3-206ENST00000554005 FUT2Q10981 343 aa10.56□□□□□ -0.72
FOXN3-206ENST00000554005 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
FOXN3-206ENST00000554005 HLA-CQ95604 372 aa10.56□□□□□ -0.72
FOXN3-206ENST00000554005 PCDHB15Q9Y5E8 787 aa10.56□□□□□ -0.72
FOXN3-206ENST00000554005 GUCA2AQ02747 115 aa10.55□□□□□ -0.72
FOXN3-206ENST00000554005 KMT5BQ4FZB7 885 aa10.55□□□□□ -0.72
FOXN3-206ENST00000554005 NECTIN2Q92692 538 aa10.55□□□□□ -0.72
FOXN3-206ENST00000554005 WNT2BQ93097 391 aa10.55□□□□□ -0.72
FOXN3-206ENST00000554005 POTEMA6NI47 508 aa10.54□□□□□ -0.72
FOXN3-206ENST00000554005 FDX1P10109 184 aa10.54□□□□□ -0.72
FOXN3-206ENST00000554005 QPCTQ16769 361 aa10.54□□□□□ -0.72
FOXN3-206ENST00000554005 PPP2R2DQ66LE6 453 aa10.54□□□□□ -0.72
FOXN3-206ENST00000554005 HPS5Q9UPZ3 1129 aa10.54□□□□□ -0.72
FOXN3-206ENST00000554005 LILRB3O75022 631 aa10.53□□□□□ -0.72
FOXN3-206ENST00000554005 RFC5P40937 340 aa10.53□□□□□ -0.72
FOXN3-206ENST00000554005 FLIIQ13045 1269 aa10.53□□□□□ -0.72
FOXN3-206ENST00000554005 CDAN1Q8IWY9 1227 aa10.53□□□□□ -0.72
FOXN3-206ENST00000554005 PCDHGC3Q9UN70 934 aa10.53□□□□□ -0.72
FOXN3-206ENST00000554005 ACTN4O43707 911 aaKnown RBP10.51□□□□□ -0.73
FOXN3-206ENST00000554005 ATP6V1AP38606 617 aa10.51□□□□□ -0.73
FOXN3-206ENST00000554005 PPP4CP60510 307 aa10.51□□□□□ -0.73
FOXN3-206ENST00000554005 GRIPAP1Q4V328 841 aa10.51□□□□□ -0.73
FOXN3-206ENST00000554005 CABLES1Q8TDN4 633 aa10.51□□□□□ -0.73
FOXN3-206ENST00000554005 TSR3Q9UJK0 312 aaKnown RBP10.51□□□□□ -0.73
FOXN3-206ENST00000554005 MCM6Q14566 821 aa10.5□□□□□ -0.73
FOXN3-206ENST00000554005 PRPF38BQ5VTL8 546 aaKnown RBP10.5□□□□□ -0.73
FOXN3-206ENST00000554005 HRCP23327 699 aa10.49□□□□□ -0.73
FOXN3-206ENST00000554005 APLP1P51693 650 aa10.49□□□□□ -0.73
FOXN3-206ENST00000554005 RTL5Q5HYW3 569 aaPredicted RBP10.49□□□□□ -0.73
FOXN3-206ENST00000554005 PRR14Q9BWN1 585 aa10.49□□□□□ -0.73
FOXN3-206ENST00000554005 ZBTB3Q9H5J0 574 aa10.49□□□□□ -0.73
FOXN3-206ENST00000554005 MORN1Q5T089 497 aa10.48□□□□□ -0.73
FOXN3-206ENST00000554005 NUTM2BA6NNL0 878 aaPredicted RBP10.47□□□□□ -0.73
FOXN3-206ENST00000554005 NUTM2EB1AL46 878 aaPredicted RBP10.47□□□□□ -0.73
FOXN3-206ENST00000554005 PUS10Q3MIT2 529 aaKnown RBP10.47□□□□□ -0.73
FOXN3-206ENST00000554005 TMEM259Q4ZIN3 620 aa10.47□□□□□ -0.73
FOXN3-206ENST00000554005 NUTM2DQ5VT03 806 aaPredicted RBP10.47□□□□□ -0.73
FOXN3-206ENST00000554005 THSD4Q6ZMP0 1018 aa10.47□□□□□ -0.73
FOXN3-206ENST00000554005 NUTM2AQ8IVF1 878 aaPredicted RBP10.47□□□□□ -0.73
FOXN3-206ENST00000554005 BANK1Q8NDB2 785 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms