RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-209ENST00000553889 EIF3AQ14152 1382 aaKnown RBP12.53□□□□□ -0.4
PRKCH-209ENST00000553889 KIF1BO60333 1816 aa12.53□□□□□ -0.4
PRKCH-209ENST00000553889 ADGRB3O60242 1522 aa12.52□□□□□ -0.4
PRKCH-209ENST00000553889 SETBP1Q9Y6X0 1596 aa12.52□□□□□ -0.4
PRKCH-209ENST00000553889 TMC1Q8TDI8 760 aa12.52□□□□□ -0.41
PRKCH-209ENST00000553889 RPGRIP1LQ68CZ1 1315 aa12.52□□□□□ -0.41
PRKCH-209ENST00000553889 SYNMO15061 1565 aa12.52□□□□□ -0.41
PRKCH-209ENST00000553889 NOS1P29475 1434 aa12.51□□□□□ -0.41
PRKCH-209ENST00000553889 MYO3AQ8NEV4 1616 aa12.5□□□□□ -0.41
PRKCH-209ENST00000553889 ABCC3O15438 1527 aa12.49□□□□□ -0.41
PRKCH-209ENST00000553889 ABCA6Q8N139 1617 aa12.48□□□□□ -0.41
PRKCH-209ENST00000553889 NPATQ14207 1427 aa12.48□□□□□ -0.41
PRKCH-209ENST00000553889 PDE3BQ13370 1112 aa12.48□□□□□ -0.41
PRKCH-209ENST00000553889 TSHZ2Q9NRE2 1034 aa12.48□□□□□ -0.41
PRKCH-209ENST00000553889 NUDCQ9Y266 331 aa12.48□□□□□ -0.41
PRKCH-209ENST00000553889 ZC3H13Q5T200 1668 aaKnown RBP12.48□□□□□ -0.41
PRKCH-209ENST00000553889 PPP4R2Q9NY27 417 aa12.47□□□□□ -0.41
PRKCH-209ENST00000553889 RICTORQ6R327 1708 aa12.47□□□□□ -0.41
PRKCH-209ENST00000553889 PIK3C2BO00750 1634 aa12.47□□□□□ -0.41
PRKCH-209ENST00000553889 DIP2CQ9Y2E4 1556 aa12.47□□□□□ -0.41
PRKCH-209ENST00000553889 ZFYVE9O95405 1425 aa12.46□□□□□ -0.41
PRKCH-209ENST00000553889 PUS7Q96PZ0 661 aaKnown RBP12.46□□□□□ -0.41
PRKCH-209ENST00000553889 BLMP54132 1417 aaPredicted RBP12.45□□□□□ -0.42
PRKCH-209ENST00000553889 POLR3GLQ9BT43 218 aa12.45□□□□□ -0.42
PRKCH-209ENST00000553889 PANK3Q9H999 370 aa12.45□□□□□ -0.42
PRKCH-209ENST00000553889 REREQ9P2R6 1566 aa12.44□□□□□ -0.42
PRKCH-209ENST00000553889 PIK3C2GO75747 1445 aa12.44□□□□□ -0.42
PRKCH-209ENST00000553889 PPLO60437 1756 aa12.43□□□□□ -0.42
PRKCH-209ENST00000553889 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
PRKCH-209ENST00000553889 MROH2AA6NES4 1674 aa12.43□□□□□ -0.42
PRKCH-209ENST00000553889 MYOM1P52179 1685 aa12.43□□□□□ -0.42
PRKCH-209ENST00000553889 C14orf93Q9H972 538 aaKnown RBP12.43□□□□□ -0.42
PRKCH-209ENST00000553889 PPP6R1Q9UPN7 881 aa12.43□□□□□ -0.42
PRKCH-209ENST00000553889 CAMSAP1Q5T5Y3 1602 aa12.43□□□□□ -0.42
PRKCH-209ENST00000553889 UGGT1Q9NYU2 1555 aa12.43□□□□□ -0.42
PRKCH-209ENST00000553889 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
PRKCH-209ENST00000553889 ADGRB1O14514 1584 aa12.42□□□□□ -0.42
PRKCH-209ENST00000553889 KDM5AP29375 1690 aaKnown RBP12.42□□□□□ -0.42
PRKCH-209ENST00000553889 ADGRF5Q8IZF2 1346 aa12.41□□□□□ -0.42
PRKCH-209ENST00000553889 ERVK-7P63135 1459 aa12.41□□□□□ -0.42
PRKCH-209ENST00000553889 SLC52A1Q9NWF4 448 aa12.4□□□□□ -0.42
PRKCH-209ENST00000553889 MYT1LQ9UL68 1186 aa12.4□□□□□ -0.42
PRKCH-209ENST00000553889 KNSTRNQ9Y448 316 aa12.4□□□□□ -0.42
PRKCH-209ENST00000553889 AGLP35573 1532 aa12.4□□□□□ -0.42
PRKCH-209ENST00000553889 CFAP70Q5T0N1 1121 aa12.38□□□□□ -0.43
PRKCH-209ENST00000553889 NGEFQ8N5V2 710 aa12.38□□□□□ -0.43
PRKCH-209ENST00000553889 BCANQ96GW7 911 aa12.37□□□□□ -0.43
PRKCH-209ENST00000553889 SIGLEC1Q9BZZ2 1709 aa12.37□□□□□ -0.43
PRKCH-209ENST00000553889 NEXMIFQ5QGS0 1516 aa12.37□□□□□ -0.43
PRKCH-209ENST00000553889 DIP2BQ9P265 1576 aa12.36□□□□□ -0.43
PRKCH-209ENST00000553889 VGFO15240 615 aaPredicted RBP12.36□□□□□ -0.43
PRKCH-209ENST00000553889 CENPJQ9HC77 1338 aaPredicted RBP12.36□□□□□ -0.43
PRKCH-209ENST00000553889 RAPGEF3O95398 923 aa12.35□□□□□ -0.43
PRKCH-209ENST00000553889 PPP2R1AP30153 589 aa12.35□□□□□ -0.43
PRKCH-209ENST00000553889 USP32Q8NFA0 1604 aa12.35□□□□□ -0.43
PRKCH-209ENST00000553889 GGT6Q6P531 493 aa12.34□□□□□ -0.43
PRKCH-209ENST00000553889 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.43
PRKCH-209ENST00000553889 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.43
PRKCH-209ENST00000553889 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.43
PRKCH-209ENST00000553889 YEATS2Q9ULM3 1422 aa12.33□□□□□ -0.44
PRKCH-209ENST00000553889 CC2D1BQ5T0F9 858 aaKnown RBP12.32□□□□□ -0.44
PRKCH-209ENST00000553889 NCBP3Q53F19 620 aaKnown RBP12.31□□□□□ -0.44
PRKCH-209ENST00000553889 PREX1Q8TCU6 1659 aa12.31□□□□□ -0.44
PRKCH-209ENST00000553889 ZNF521Q96K83 1311 aa12.31□□□□□ -0.44
PRKCH-209ENST00000553889 POLR3AO14802 1390 aaPredicted RBP12.3□□□□□ -0.44
PRKCH-209ENST00000553889 NINLQ9Y2I6 1382 aa12.3□□□□□ -0.44
PRKCH-209ENST00000553889 TMEM131LA2VDJ0 1609 aa12.3□□□□□ -0.44
PRKCH-209ENST00000553889 QRICH2Q9H0J4 1663 aa12.29□□□□□ -0.44
PRKCH-209ENST00000553889 MYT1Q01538 1121 aa12.29□□□□□ -0.44
PRKCH-209ENST00000553889 NSD2O96028 1365 aa12.29□□□□□ -0.44
PRKCH-209ENST00000553889 IDI1Q13907 227 aa12.28□□□□□ -0.44
PRKCH-209ENST00000553889 CARD14Q9BXL6 1004 aa12.28□□□□□ -0.44
PRKCH-209ENST00000553889 RCAN3Q9UKA8 241 aa12.28□□□□□ -0.44
PRKCH-209ENST00000553889 RBM19Q9Y4C8 960 aaKnown RBP12.28□□□□□ -0.44
PRKCH-209ENST00000553889 ARHGEF28Q8N1W1 1705 aaKnown RBP12.28□□□□□ -0.44
PRKCH-209ENST00000553889 RRP1P56182 461 aaKnown RBP12.27□□□□□ -0.45
PRKCH-209ENST00000553889 ADAMTS8Q9UP79 889 aa12.27□□□□□ -0.45
PRKCH-209ENST00000553889 IRX6P78412 446 aaPredicted RBP12.26□□□□□ -0.45
PRKCH-209ENST00000553889 CYB5RLQ6IPT4 315 aa12.26□□□□□ -0.45
PRKCH-209ENST00000553889 TRMT2AQ8IZ69 625 aaKnown RBP12.26□□□□□ -0.45
PRKCH-209ENST00000553889 SPATA31D1Q6ZQQ2 1576 aa12.26□□□□□ -0.45
PRKCH-209ENST00000553889 CFAP65Q6ZU64 1925 aaKnown RBP12.25□□□□□ -0.45
PRKCH-209ENST00000553889 WDR43Q15061 677 aaKnown RBP eCLIP12.25□□□□□ -0.45
PRKCH-209ENST00000553889 FANCIQ9NVI1 1328 aa12.25□□□□□ -0.45
PRKCH-209ENST00000553889 FAM69CQ0P6D2 419 aa12.24□□□□□ -0.45
PRKCH-209ENST00000553889 EVC2Q86UK5 1308 aa12.24□□□□□ -0.45
PRKCH-209ENST00000553889 DLC1Q96QB1 1528 aa12.24□□□□□ -0.45
PRKCH-209ENST00000553889 TULP4Q9NRJ4 1543 aa12.24□□□□□ -0.45
PRKCH-209ENST00000553889 CLTCQ00610 1675 aaKnown RBP12.23□□□□□ -0.45
PRKCH-209ENST00000553889 MED14O60244 1454 aa12.23□□□□□ -0.45
PRKCH-209ENST00000553889 ANKRD36BQ8N2N9 1353 aa12.23□□□□□ -0.45
PRKCH-209ENST00000553889 CHGAP10645 457 aaKnown RBP12.23□□□□□ -0.45
PRKCH-209ENST00000553889 CNGB1Q14028 1251 aaPredicted RBP12.23□□□□□ -0.45
PRKCH-209ENST00000553889 TRAK1Q9UPV9 953 aa12.22□□□□□ -0.45
PRKCH-209ENST00000553889 ARHGEF40Q8TER5 1519 aa12.21□□□□□ -0.45
PRKCH-209ENST00000553889 PTPRMP28827 1452 aa12.21□□□□□ -0.45
PRKCH-209ENST00000553889 PLEKHH1Q9ULM0 1364 aa12.21□□□□□ -0.45
PRKCH-209ENST00000553889 CGNL1Q0VF96 1302 aa12.21□□□□□ -0.45
PRKCH-209ENST00000553889 DUSP27Q5VZP5 1158 aa12.21□□□□□ -0.45
PRKCH-209ENST00000553889 NSD3Q9BZ95 1437 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms