RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 KDM5AP29375 1690 aaKnown RBP20.22■□□□□ 0.83
PRKCH-206ENST00000553830 UHRF1BP1Q6BDS2 1440 aa20.19■□□□□ 0.82
PRKCH-206ENST00000553830 NBPF8Q3BBV2 869 aa20.19■□□□□ 0.82
PRKCH-206ENST00000553830 RIMS2Q9UQ26 1411 aa20.19■□□□□ 0.82
PRKCH-206ENST00000553830 RPGRIP1LQ68CZ1 1315 aa20.16■□□□□ 0.82
PRKCH-206ENST00000553830 ADGRF5Q8IZF2 1346 aa20.15■□□□□ 0.82
PRKCH-206ENST00000553830 PRAG1Q86YV5 1406 aa20.15■□□□□ 0.82
PRKCH-206ENST00000553830 MYOM2P54296 1465 aa20.15■□□□□ 0.82
PRKCH-206ENST00000553830 TRPM1Q7Z4N2 1603 aa20.13■□□□□ 0.81
PRKCH-206ENST00000553830 TMEM2Q9UHN6 1383 aa20.12■□□□□ 0.81
PRKCH-206ENST00000553830 THEMISQ8N1K5 641 aaPredicted RBP20.12■□□□□ 0.81
PRKCH-206ENST00000553830 ZFYVE9O95405 1425 aa20.11■□□□□ 0.81
PRKCH-206ENST00000553830 VGFO15240 615 aaPredicted RBP20.11■□□□□ 0.81
PRKCH-206ENST00000553830 BCANQ96GW7 911 aa20.1■□□□□ 0.81
PRKCH-206ENST00000553830 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.09■□□□□ 0.81
PRKCH-206ENST00000553830 IQGAP1P46940 1657 aa20.09■□□□□ 0.81
PRKCH-206ENST00000553830 SLIT1O75093 1534 aa20.08■□□□□ 0.81
PRKCH-206ENST00000553830 TXNDC2Q86VQ3 553 aa20.08■□□□□ 0.81
PRKCH-206ENST00000553830 EID1Q9Y6B2 187 aa20.08■□□□□ 0.81
PRKCH-206ENST00000553830 RALGAPBQ86X10 1494 aa20.07■□□□□ 0.8
PRKCH-206ENST00000553830 ARHGAP23Q9P227 1491 aa20.07■□□□□ 0.8
PRKCH-206ENST00000553830 NRXN1Q9ULB1 1477 aa20.07■□□□□ 0.8
PRKCH-206ENST00000553830 HDGFP51858 240 aaKnown RBP20.07■□□□□ 0.8
PRKCH-206ENST00000553830 POLR1AO95602 1720 aaPredicted RBP20.07■□□□□ 0.8
PRKCH-206ENST00000553830 PIK3C2GO75747 1445 aa20.06■□□□□ 0.8
PRKCH-206ENST00000553830 LTKP29376 864 aa20.06■□□□□ 0.8
PRKCH-206ENST00000553830 CFAP70Q5T0N1 1121 aa20.06■□□□□ 0.8
PRKCH-206ENST00000553830 STAC3Q96MF2 364 aa20.06■□□□□ 0.8
PRKCH-206ENST00000553830 KIAA1210Q9ULL0 1709 aa20.06■□□□□ 0.8
PRKCH-206ENST00000553830 ROCK2O75116 1388 aaKnown RBP20.06■□□□□ 0.8
PRKCH-206ENST00000553830 HSPA2P54652 639 aa20.05■□□□□ 0.8
PRKCH-206ENST00000553830 NBPF1Q3BBV0 1214 aa20.04■□□□□ 0.8
PRKCH-206ENST00000553830 SCAF11Q99590 1463 aaKnown RBP20.04■□□□□ 0.8
PRKCH-206ENST00000553830 LAMC1P11047 1609 aa20.03■□□□□ 0.8
PRKCH-206ENST00000553830 NRXN3Q9Y4C0 1643 aa20.03■□□□□ 0.8
PRKCH-206ENST00000553830 LMTK3Q96Q04 1460 aa20.02■□□□□ 0.8
PRKCH-206ENST00000553830 ANKLE2Q86XL3 938 aa20.01■□□□□ 0.79
PRKCH-206ENST00000553830 CARD11Q9BXL7 1154 aa20.01■□□□□ 0.79
PRKCH-206ENST00000553830 ALKQ9UM73 1620 aa20.01■□□□□ 0.79
PRKCH-206ENST00000553830 NCKAP5LQ9HCH0 1330 aa20■□□□□ 0.79
PRKCH-206ENST00000553830 SETD1AO15047 1707 aaKnown RBP19.99■□□□□ 0.79
PRKCH-206ENST00000553830 PLEKHG1Q9ULL1 1385 aa19.99■□□□□ 0.79
PRKCH-206ENST00000553830 SETBP1Q9Y6X0 1596 aa19.99■□□□□ 0.79
PRKCH-206ENST00000553830 TMEM132EQ6IEE7 984 aa19.98■□□□□ 0.79
PRKCH-206ENST00000553830 C14orf93Q9H972 538 aaKnown RBP19.98■□□□□ 0.79
PRKCH-206ENST00000553830 HIRIP3Q9BW71 556 aaPredicted RBP19.97■□□□□ 0.79
PRKCH-206ENST00000553830 ASXL1Q8IXJ9 1541 aa19.97■□□□□ 0.79
PRKCH-206ENST00000553830 SLC26A8Q96RN1 970 aa19.96■□□□□ 0.79
PRKCH-206ENST00000553830 ADGRB1O14514 1584 aa19.94■□□□□ 0.78
PRKCH-206ENST00000553830 USP47Q96K76 1375 aa19.94■□□□□ 0.78
PRKCH-206ENST00000553830 NPHP4O75161 1426 aaPredicted RBP19.93■□□□□ 0.78
PRKCH-206ENST00000553830 ADAMTS13Q76LX8 1427 aa19.93■□□□□ 0.78
PRKCH-206ENST00000553830 STK26Q9P289 416 aa19.93■□□□□ 0.78
PRKCH-206ENST00000553830 GPRASP1Q5JY77 1395 aa19.93■□□□□ 0.78
PRKCH-206ENST00000553830 HSPA5P11021 654 aaKnown RBP19.92■□□□□ 0.78
PRKCH-206ENST00000553830 EIF4G2P78344 907 aaKnown RBP eCLIP19.92■□□□□ 0.78
PRKCH-206ENST00000553830 STRCQ7RTU9 1775 aa19.91■□□□□ 0.78
PRKCH-206ENST00000553830 AEBP2Q6ZN18 517 aaPredicted RBP19.9■□□□□ 0.78
PRKCH-206ENST00000553830 TRAK1Q9UPV9 953 aa19.9■□□□□ 0.78
PRKCH-206ENST00000553830 METP08581 1390 aa19.9■□□□□ 0.78
PRKCH-206ENST00000553830 DIP2AQ14689 1571 aa19.9■□□□□ 0.78
PRKCH-206ENST00000553830 ARHGEF28Q8N1W1 1705 aaKnown RBP19.89■□□□□ 0.77
PRKCH-206ENST00000553830 YTHDC2Q9H6S0 1430 aaKnown RBP19.87■□□□□ 0.77
PRKCH-206ENST00000553830 MED14O60244 1454 aa19.86■□□□□ 0.77
PRKCH-206ENST00000553830 KNDC1Q76NI1 1749 aa19.85■□□□□ 0.77
PRKCH-206ENST00000553830 QRICH2Q9H0J4 1663 aa19.84■□□□□ 0.77
PRKCH-206ENST00000553830 EIF3AQ14152 1382 aaKnown RBP19.84■□□□□ 0.77
PRKCH-206ENST00000553830 ST20-MTHFSA0A0A6YYL1 179 aa19.84■□□□□ 0.77
PRKCH-206ENST00000553830 TBX22Q9Y458 520 aa19.84■□□□□ 0.77
PRKCH-206ENST00000553830 LRPPRCP42704 1394 aaKnown RBP19.83■□□□□ 0.77
PRKCH-206ENST00000553830 CHD2O14647 1828 aaKnown RBP19.83■□□□□ 0.76
PRKCH-206ENST00000553830 ZNF316A6NFI3 1004 aaPredicted RBP19.82■□□□□ 0.76
PRKCH-206ENST00000553830 SAFB2Q14151 953 aaKnown RBP eCLIP19.82■□□□□ 0.76
PRKCH-206ENST00000553830 PTPRUQ92729 1446 aa19.82■□□□□ 0.76
PRKCH-206ENST00000553830 XRN1Q8IZH2 1706 aaKnown RBP19.79■□□□□ 0.76
PRKCH-206ENST00000553830 POGKQ9P215 609 aa19.79■□□□□ 0.76
PRKCH-206ENST00000553830 AMOTL2Q9Y2J4 779 aa19.79■□□□□ 0.76
PRKCH-206ENST00000553830 CENPJQ9HC77 1338 aaPredicted RBP19.78■□□□□ 0.76
PRKCH-206ENST00000553830 CPS1P31327 1500 aa19.78■□□□□ 0.76
PRKCH-206ENST00000553830 PRAM1Q96QH2 718 aa19.78■□□□□ 0.76
PRKCH-206ENST00000553830 DLC1Q96QB1 1528 aa19.77■□□□□ 0.76
PRKCH-206ENST00000553830 POLR3GLQ9BT43 218 aa19.77■□□□□ 0.76
PRKCH-206ENST00000553830 ABCC11Q96J66 1382 aa19.76■□□□□ 0.75
PRKCH-206ENST00000553830 PLEKHH1Q9ULM0 1364 aa19.76■□□□□ 0.75
PRKCH-206ENST00000553830 WAPLQ7Z5K2 1190 aa19.76■□□□□ 0.75
PRKCH-206ENST00000553830 ROBO2Q9HCK4 1378 aa19.75■□□□□ 0.75
PRKCH-206ENST00000553830 STRCP1A6NGW2 1772 aa19.75■□□□□ 0.75
PRKCH-206ENST00000553830 PIK3R4Q99570 1358 aa19.74■□□□□ 0.75
PRKCH-206ENST00000553830 KCNA6P17658 529 aa19.74■□□□□ 0.75
PRKCH-206ENST00000553830 MINK1Q8N4C8 1332 aaPredicted RBP19.74■□□□□ 0.75
PRKCH-206ENST00000553830 TECPR2O15040 1411 aa19.73■□□□□ 0.75
PRKCH-206ENST00000553830 NWD1Q149M9 1564 aa19.72■□□□□ 0.75
PRKCH-206ENST00000553830 C11orf95C9JLR9 678 aaPredicted RBP19.71■□□□□ 0.75
PRKCH-206ENST00000553830 TESK2Q96S53 571 aa19.71■□□□□ 0.75
PRKCH-206ENST00000553830 DISP3Q9P2K9 1392 aa19.7■□□□□ 0.74
PRKCH-206ENST00000553830 PTCH1Q13635 1447 aa19.69■□□□□ 0.74
PRKCH-206ENST00000553830 FAM135BQ49AJ0 1406 aa19.69■□□□□ 0.74
PRKCH-206ENST00000553830 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.69■□□□□ 0.74
PRKCH-206ENST00000553830 TMF1P82094 1093 aa19.69■□□□□ 0.74
PRKCH-206ENST00000553830 RBM33Q96EV2 1170 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms