RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 SCAF11Q99590 1463 aaKnown RBP17.22■□□□□ 0.35
PSMC6-204ENST00000553798 ZFYVE9O95405 1425 aa17.21■□□□□ 0.35
PSMC6-204ENST00000553798 MYO5BQ9ULV0 1848 aa17.21■□□□□ 0.35
PSMC6-204ENST00000553798 CHGAP10645 457 aaKnown RBP17.2■□□□□ 0.34
PSMC6-204ENST00000553798 HDGFP51858 240 aaKnown RBP17.2■□□□□ 0.34
PSMC6-204ENST00000553798 NPHP4O75161 1426 aaPredicted RBP17.2■□□□□ 0.34
PSMC6-204ENST00000553798 CACNB1Q02641 598 aaPredicted RBP17.18■□□□□ 0.34
PSMC6-204ENST00000553798 CCDC144AA2RUR9 1427 aa17.18■□□□□ 0.34
PSMC6-204ENST00000553798 RIMS2Q9UQ26 1411 aa17.18■□□□□ 0.34
PSMC6-204ENST00000553798 ANKRD30BQ9BXX2 1392 aa17.17■□□□□ 0.34
PSMC6-204ENST00000553798 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.17■□□□□ 0.34
PSMC6-204ENST00000553798 KIF1BO60333 1816 aa17.17■□□□□ 0.34
PSMC6-204ENST00000553798 IQGAP1P46940 1657 aa17.16■□□□□ 0.34
PSMC6-204ENST00000553798 PLEKHG1Q9ULL1 1385 aa17.14■□□□□ 0.33
PSMC6-204ENST00000553798 SPATA31E1Q6ZUB1 1445 aa17.13■□□□□ 0.33
PSMC6-204ENST00000553798 RPGRIP1LQ68CZ1 1315 aa17.13■□□□□ 0.33
PSMC6-204ENST00000553798 ZNF326Q5BKZ1 582 aaKnown RBP17.12■□□□□ 0.33
PSMC6-204ENST00000553798 NEXMIFQ5QGS0 1516 aa17.11■□□□□ 0.33
PSMC6-204ENST00000553798 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
PSMC6-204ENST00000553798 LTBP4Q8N2S1 1624 aa17.1■□□□□ 0.33
PSMC6-204ENST00000553798 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
PSMC6-204ENST00000553798 NUTM2DQ5VT03 806 aaPredicted RBP17.08■□□□□ 0.32
PSMC6-204ENST00000553798 TBX22Q9Y458 520 aa17.08■□□□□ 0.32
PSMC6-204ENST00000553798 VGFO15240 615 aaPredicted RBP17.07■□□□□ 0.32
PSMC6-204ENST00000553798 ADAMTS13Q76LX8 1427 aa17.06■□□□□ 0.32
PSMC6-204ENST00000553798 SLC26A8Q96RN1 970 aa17.06■□□□□ 0.32
PSMC6-204ENST00000553798 DHX57Q6P158 1386 aaKnown RBP17.05■□□□□ 0.32
PSMC6-204ENST00000553798 RGL3Q3MIN7 710 aa17.05■□□□□ 0.32
PSMC6-204ENST00000553798 PCGF6Q9BYE7 350 aa17.05■□□□□ 0.32
PSMC6-204ENST00000553798 SETBP1Q9Y6X0 1596 aa17.05■□□□□ 0.32
PSMC6-204ENST00000553798 PPLO60437 1756 aa17.05■□□□□ 0.32
PSMC6-204ENST00000553798 CERKQ8TCT0 537 aa17.04■□□□□ 0.32
PSMC6-204ENST00000553798 BCANQ96GW7 911 aa17.04■□□□□ 0.32
PSMC6-204ENST00000553798 DIP2AQ14689 1571 aa17.03■□□□□ 0.32
PSMC6-204ENST00000553798 CPS1P31327 1500 aa17.02■□□□□ 0.32
PSMC6-204ENST00000553798 NRXN3Q9Y4C0 1643 aa17.02■□□□□ 0.31
PSMC6-204ENST00000553798 PIK3R4Q99570 1358 aa17.02■□□□□ 0.31
PSMC6-204ENST00000553798 IFT172Q9UG01 1749 aa17.01■□□□□ 0.31
PSMC6-204ENST00000553798 KCNA6P17658 529 aa17.01■□□□□ 0.31
PSMC6-204ENST00000553798 STRCP1A6NGW2 1772 aa17■□□□□ 0.31
PSMC6-204ENST00000553798 IQSEC2Q5JU85 1478 aa16.99■□□□□ 0.31
PSMC6-204ENST00000553798 ADGRF5Q8IZF2 1346 aa16.99■□□□□ 0.31
PSMC6-204ENST00000553798 DCAF8L1A6NGE4 600 aa16.99■□□□□ 0.31
PSMC6-204ENST00000553798 STAC3Q96MF2 364 aa16.99■□□□□ 0.31
PSMC6-204ENST00000553798 MYOM2P54296 1465 aa16.98■□□□□ 0.31
PSMC6-204ENST00000553798 NRXN1Q9ULB1 1477 aa16.98■□□□□ 0.31
PSMC6-204ENST00000553798 NWD1Q149M9 1564 aa16.98■□□□□ 0.31
PSMC6-204ENST00000553798 PPP4R3CPQ6ZMV5 832 aa16.97■□□□□ 0.31
PSMC6-204ENST00000553798 CHD2O14647 1828 aaKnown RBP16.97■□□□□ 0.31
PSMC6-204ENST00000553798 METP08581 1390 aa16.96■□□□□ 0.31
PSMC6-204ENST00000553798 ALKQ9UM73 1620 aa16.96■□□□□ 0.3
PSMC6-204ENST00000553798 LRRC7Q96NW7 1537 aa16.96■□□□□ 0.3
PSMC6-204ENST00000553798 PIK3C2GO75747 1445 aa16.96■□□□□ 0.3
PSMC6-204ENST00000553798 NKTRP30414 1462 aaKnown RBP16.95■□□□□ 0.3
PSMC6-204ENST00000553798 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
PSMC6-204ENST00000553798 SIN3AQ96ST3 1273 aa16.94■□□□□ 0.3
PSMC6-204ENST00000553798 PTPRUQ92729 1446 aa16.94■□□□□ 0.3
PSMC6-204ENST00000553798 SETD1AO15047 1707 aaKnown RBP16.93■□□□□ 0.3
PSMC6-204ENST00000553798 DCAF11Q8TEB1 546 aa16.93■□□□□ 0.3
PSMC6-204ENST00000553798 C14orf93Q9H972 538 aaKnown RBP16.92■□□□□ 0.3
PSMC6-204ENST00000553798 AMOTL2Q9Y2J4 779 aa16.92■□□□□ 0.3
PSMC6-204ENST00000553798 PRAG1Q86YV5 1406 aa16.9■□□□□ 0.3
PSMC6-204ENST00000553798 PROSER2Q86WR7 435 aaPredicted RBP16.9■□□□□ 0.3
PSMC6-204ENST00000553798 FBXO41Q8TF61 875 aa16.9■□□□□ 0.3
PSMC6-204ENST00000553798 XRN1Q8IZH2 1706 aaKnown RBP16.9■□□□□ 0.3
PSMC6-204ENST00000553798 NCOA3Q9Y6Q9 1424 aa16.89■□□□□ 0.29
PSMC6-204ENST00000553798 KDM2AQ9Y2K7 1162 aa16.89■□□□□ 0.29
PSMC6-204ENST00000553798 TMEM94Q12767 1356 aa16.89■□□□□ 0.29
PSMC6-204ENST00000553798 XIRP1Q702N8 1843 aaKnown RBP16.88■□□□□ 0.29
PSMC6-204ENST00000553798 NEUROD1Q13562 356 aa16.87■□□□□ 0.29
PSMC6-204ENST00000553798 CFAP70Q5T0N1 1121 aa16.87■□□□□ 0.29
PSMC6-204ENST00000553798 L3MBTL2Q969R5 705 aa16.87■□□□□ 0.29
PSMC6-204ENST00000553798 CLSPNQ9HAW4 1339 aa16.87■□□□□ 0.29
PSMC6-204ENST00000553798 LAMC1P11047 1609 aa16.86■□□□□ 0.29
PSMC6-204ENST00000553798 ASXL1Q8IXJ9 1541 aa16.85■□□□□ 0.29
PSMC6-204ENST00000553798 LRPPRCP42704 1394 aaKnown RBP16.84■□□□□ 0.29
PSMC6-204ENST00000553798 ABCC11Q96J66 1382 aa16.84■□□□□ 0.29
PSMC6-204ENST00000553798 PTCH1Q13635 1447 aa16.84■□□□□ 0.29
PSMC6-204ENST00000553798 TECPR2O15040 1411 aa16.83■□□□□ 0.28
PSMC6-204ENST00000553798 TMEM132EQ6IEE7 984 aa16.83■□□□□ 0.28
PSMC6-204ENST00000553798 RBM33Q96EV2 1170 aaKnown RBP16.83■□□□□ 0.28
PSMC6-204ENST00000553798 RNF39Q9H2S5 420 aa16.83■□□□□ 0.28
PSMC6-204ENST00000553798 SIRT1Q96EB6 747 aa16.82■□□□□ 0.28
PSMC6-204ENST00000553798 ADGRB1O14514 1584 aa16.81■□□□□ 0.28
PSMC6-204ENST00000553798 YTHDC2Q9H6S0 1430 aaKnown RBP16.81■□□□□ 0.28
PSMC6-204ENST00000553798 ROBO2Q9HCK4 1378 aa16.81■□□□□ 0.28
PSMC6-204ENST00000553798 UBAP1LF5GYI3 381 aa16.81■□□□□ 0.28
PSMC6-204ENST00000553798 TOM1O60784 492 aa16.81■□□□□ 0.28
PSMC6-204ENST00000553798 C19orf44Q9H6X5 657 aa16.8■□□□□ 0.28
PSMC6-204ENST00000553798 MSH6P52701 1360 aa16.79■□□□□ 0.28
PSMC6-204ENST00000553798 ILDR1Q86SU0 546 aaPredicted RBP16.79■□□□□ 0.28
PSMC6-204ENST00000553798 KIAA1210Q9ULL0 1709 aa16.79■□□□□ 0.28
PSMC6-204ENST00000553798 STK26Q9P289 416 aa16.78■□□□□ 0.28
PSMC6-204ENST00000553798 KNDC1Q76NI1 1749 aa16.78■□□□□ 0.28
PSMC6-204ENST00000553798 FAM135BQ49AJ0 1406 aa16.77■□□□□ 0.27
PSMC6-204ENST00000553798 TONSLQ96HA7 1378 aa16.77■□□□□ 0.27
PSMC6-204ENST00000553798 CNKSR2Q8WXI2 1034 aa16.76■□□□□ 0.27
PSMC6-204ENST00000553798 DCCP43146 1447 aa16.76■□□□□ 0.27
PSMC6-204ENST00000553798 ADGRL3Q9HAR2 1447 aa16.76■□□□□ 0.27
PSMC6-204ENST00000553798 DLC1Q96QB1 1528 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms